RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 OTORQ9NRC9 128 aa15.11■□□□□ 0.01
TNFRSF1A-201ENST00000162749 ISLRO14498 428 aa15.1■□□□□ 0.01
TNFRSF1A-201ENST00000162749 CBLN1P23435 193 aa15.1■□□□□ 0.01
TNFRSF1A-201ENST00000162749 TAS2R60P59551 318 aa15.1■□□□□ 0.01
TNFRSF1A-201ENST00000162749 NHLRC2Q8NBF2 726 aa15.1■□□□□ 0.01
TNFRSF1A-201ENST00000162749 MYOZ3Q8TDC0 251 aa15.1■□□□□ 0.01
TNFRSF1A-201ENST00000162749 IGHV3OR16-13A0A075B7E8 117 aa15.09■□□□□ 0.01
TNFRSF1A-201ENST00000162749 IGHV3-74A0A0B4J1X5 117 aa15.09■□□□□ 0.01
TNFRSF1A-201ENST00000162749 SCGB2A2Q13296 93 aa15.09■□□□□ 0.01
TNFRSF1A-201ENST00000162749 PDE6HQ13956 83 aa15.09■□□□□ 0.01
TNFRSF1A-201ENST00000162749 PEF1Q9UBV8 284 aaKnown RBP15.09■□□□□ 0.01
TNFRSF1A-201ENST00000162749 SMAD5-AS1Q9Y6J3 95 aa15.09■□□□□ 0.01
TNFRSF1A-201ENST00000162749 A0A1B0GUS0 222 aa15.09■□□□□ 0.01
TNFRSF1A-201ENST00000162749 MGST1P10620 155 aaKnown RBP15.09■□□□□ 0.01
TNFRSF1A-201ENST00000162749 Q6ZSV7 163 aa15.09■□□□□ 0.01
TNFRSF1A-201ENST00000162749 RNF152Q8N8N0 203 aa15.09■□□□□ 0.01
TNFRSF1A-201ENST00000162749 U3KQE9 123 aa15.09■□□□□ 0.01
TNFRSF1A-201ENST00000162749 BAHCC1Q9P281 2608 aa15.08■□□□□ 0.01
TNFRSF1A-201ENST00000162749 IGHV3-49A0A0A0MS15 119 aa15.08■□□□□ 0
TNFRSF1A-201ENST00000162749 TRAV34A0A0B4J273 112 aa15.08■□□□□ 0
TNFRSF1A-201ENST00000162749 IGHV3-66A0A0C4DH42 116 aa15.08■□□□□ 0
TNFRSF1A-201ENST00000162749 SRD5A1P18405 259 aa15.08■□□□□ 0
TNFRSF1A-201ENST00000162749 LYPD1Q8N2G4 141 aa15.08■□□□□ 0
TNFRSF1A-201ENST00000162749 ATG101Q9BSB4 218 aa15.08■□□□□ 0
TNFRSF1A-201ENST00000162749 TCRAP04437 139 aa15.08■□□□□ 0
TNFRSF1A-201ENST00000162749 IBA57Q5T440 356 aaKnown RBP15.08■□□□□ 0
TNFRSF1A-201ENST00000162749 C14orf144Q96I85 54 aa15.08■□□□□ 0
TNFRSF1A-201ENST00000162749 RPH3ALQ9UNE2 315 aa15.08■□□□□ 0
TNFRSF1A-201ENST00000162749 A0A1B0GV90 55 aa15.07■□□□□ 0
TNFRSF1A-201ENST00000162749 TMEM190Q8WZ59 177 aa15.07■□□□□ 0
TNFRSF1A-201ENST00000162749 DNLZQ5SXM8 178 aa15.07■□□□□ 0
TNFRSF1A-201ENST00000162749 C1orf194Q5T5A4 169 aa15.07■□□□□ 0
TNFRSF1A-201ENST00000162749 TMEM256Q8N2U0 113 aa15.07■□□□□ 0
TNFRSF1A-201ENST00000162749 KLHDC1Q8N7A1 406 aa15.07■□□□□ 0
TNFRSF1A-201ENST00000162749 NUPR1O60356 82 aa15.06■□□□□ 0
TNFRSF1A-201ENST00000162749 JOSD1Q15040 202 aaPredicted RBP15.06■□□□□ 0
TNFRSF1A-201ENST00000162749 GBGT1Q8N5D6 347 aa15.06■□□□□ 0
TNFRSF1A-201ENST00000162749 GPR82Q96P67 336 aa15.06■□□□□ 0
TNFRSF1A-201ENST00000162749 MRPL18Q9H0U6 180 aaKnown RBP15.06■□□□□ 0
TNFRSF1A-201ENST00000162749 KLF12Q9Y4X4 402 aa15.06■□□□□ 0
TNFRSF1A-201ENST00000162749 FN1P02751 2386 aaKnown RBP15.06■□□□□ 0
TNFRSF1A-201ENST00000162749 TMEM183BQ1AE95 376 aa15.05■□□□□ 0
TNFRSF1A-201ENST00000162749 CMTM2Q8TAZ6 248 aa15.05■□□□□ 0
TNFRSF1A-201ENST00000162749 UBE2E2Q96LR5 201 aa15.05■□□□□ 0
TNFRSF1A-201ENST00000162749 SMIM27A0A1W2PRY6 76 aa15.05■□□□□ -0
TNFRSF1A-201ENST00000162749 GZMBP10144 247 aa15.05■□□□□ -0
TNFRSF1A-201ENST00000162749 BAGE2Q86Y30 109 aa15.05■□□□□ -0
TNFRSF1A-201ENST00000162749 SGK494Q96LW2 274 aa15.05■□□□□ -0
TNFRSF1A-201ENST00000162749 GRIFINA4D1Z8 144 aa15.04■□□□□ -0
TNFRSF1A-201ENST00000162749 M0R3E3 92 aa15.04■□□□□ -0
TNFRSF1A-201ENST00000162749 SPINK4O60575 86 aa15.04■□□□□ -0
TNFRSF1A-201ENST00000162749 RNASE1P07998 156 aaKnown RBP15.04■□□□□ -0
TNFRSF1A-201ENST00000162749 TCL1AP56279 114 aa15.04■□□□□ -0
TNFRSF1A-201ENST00000162749 AAMDCQ9H7C9 122 aa15.04■□□□□ -0
TNFRSF1A-201ENST00000162749 TP53TG3Q9ULZ0 132 aa15.04■□□□□ -0
TNFRSF1A-201ENST00000162749 CA1P00915 261 aaPredicted RBP15.04■□□□□ -0
TNFRSF1A-201ENST00000162749 UBE2G1P62253 170 aa15.04■□□□□ -0
TNFRSF1A-201ENST00000162749 A0A087X0K7 114 aa15.03■□□□□ -0
TNFRSF1A-201ENST00000162749 SNURFLB1AK76 121 aa15.03■□□□□ -0
TNFRSF1A-201ENST00000162749 LGALS1P09382 135 aaKnown RBP15.03■□□□□ -0
TNFRSF1A-201ENST00000162749 HILS1P60008 231 aa15.03■□□□□ -0
TNFRSF1A-201ENST00000162749 PSG9Q00887 426 aa15.03■□□□□ -0
TNFRSF1A-201ENST00000162749 REC114Q7Z4M0 266 aa15.03■□□□□ -0
TNFRSF1A-201ENST00000162749 ZNF418Q8TF45 676 aaPredicted RBP15.03■□□□□ -0
TNFRSF1A-201ENST00000162749 TMEM18Q96B42 140 aa15.03■□□□□ -0
TNFRSF1A-201ENST00000162749 F8P00451 2351 aa15.03■□□□□ -0
TNFRSF1A-201ENST00000162749 ZNF705GA8MUZ8 300 aaPredicted RBP15.02■□□□□ -0
TNFRSF1A-201ENST00000162749 ZNF253O75346 499 aa15.02■□□□□ -0
TNFRSF1A-201ENST00000162749 GPHB5Q86YW7 130 aa15.02■□□□□ -0
TNFRSF1A-201ENST00000162749 GNB1LQ9BYB4 327 aa15.02■□□□□ -0
TNFRSF1A-201ENST00000162749 C16orf54Q6UWD8 224 aa15.02□□□□□ -0.01
TNFRSF1A-201ENST00000162749 GOLT1AQ6ZVE7 132 aa15.02□□□□□ -0.01
TNFRSF1A-201ENST00000162749 FAM231DQ6ZW35 169 aa15.02□□□□□ -0.01
TNFRSF1A-201ENST00000162749 Q71RC1 249 aaPredicted RBP15.02□□□□□ -0.01
TNFRSF1A-201ENST00000162749 GLMPQ8WWB7 406 aa15.02□□□□□ -0.01
TNFRSF1A-201ENST00000162749 FMC1Q96HJ9 113 aa15.02□□□□□ -0.01
TNFRSF1A-201ENST00000162749 ZNF331Q9NQX6 463 aaPredicted RBP15.02□□□□□ -0.01
TNFRSF1A-201ENST00000162749 DAZ1Q9NQZ3 744 aaKnown RBP15.02□□□□□ -0.01
TNFRSF1A-201ENST00000162749 WNK1Q9H4A3 2382 aa15.02□□□□□ -0.01
TNFRSF1A-201ENST00000162749 TRAV8-1A0A0A6YYK1 113 aa15.01□□□□□ -0.01
TNFRSF1A-201ENST00000162749 ZNF785A8K8V0 405 aa15.01□□□□□ -0.01
TNFRSF1A-201ENST00000162749 LINC00310P59036 64 aa15.01□□□□□ -0.01
TNFRSF1A-201ENST00000162749 ZNF124Q15973 351 aa15.01□□□□□ -0.01
TNFRSF1A-201ENST00000162749 TCTEX1D4Q5JR98 221 aa15.01□□□□□ -0.01
TNFRSF1A-201ENST00000162749 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa15.01□□□□□ -0.01
TNFRSF1A-201ENST00000162749 PRB4P10163 310 aaPredicted RBP15.01□□□□□ -0.01
TNFRSF1A-201ENST00000162749 FAM106AQ4KMX7 169 aa15.01□□□□□ -0.01
TNFRSF1A-201ENST00000162749 TM4SF20Q53R12 229 aa15.01□□□□□ -0.01
TNFRSF1A-201ENST00000162749 TMEM136Q6ZRR5 245 aa15.01□□□□□ -0.01
TNFRSF1A-201ENST00000162749 NUDT10Q8NFP7 164 aa15.01□□□□□ -0.01
TNFRSF1A-201ENST00000162749 NUDT11Q96G61 164 aa15.01□□□□□ -0.01
TNFRSF1A-201ENST00000162749 DIRC3C9JPN6 131 aa15□□□□□ -0.01
TNFRSF1A-201ENST00000162749 IGLV2-11P01706 119 aa15□□□□□ -0.01
TNFRSF1A-201ENST00000162749 DDTP30046 118 aa15□□□□□ -0.01
TNFRSF1A-201ENST00000162749 PKIAP61925 76 aa15□□□□□ -0.01
TNFRSF1A-201ENST00000162749 IGFL4Q6B9Z1 124 aa15□□□□□ -0.01
TNFRSF1A-201ENST00000162749 C2CD3Q4AC94 2353 aa15□□□□□ -0.01
TNFRSF1A-201ENST00000162749 NIPBLQ6KC79 2804 aaeCLIP15□□□□□ -0.01
TNFRSF1A-201ENST00000162749 IGHV4OR15-8A0A075B7B6 117 aa14.99□□□□□ -0.01
TNFRSF1A-201ENST00000162749 A0A087WW49 117 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 154.9 ms