RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 RNF182Q8N6D2 247 aa9.61□□□□□ -0.87
CHPF2-201ENST00000035307 OR10AG1Q8NH19 301 aa9.61□□□□□ -0.87
CHPF2-201ENST00000035307 TSKUQ8WUA8 353 aa9.61□□□□□ -0.87
CHPF2-201ENST00000035307 FMC1Q96HJ9 113 aa9.61□□□□□ -0.87
CHPF2-201ENST00000035307 OTORQ9NRC9 128 aa9.61□□□□□ -0.87
CHPF2-201ENST00000035307 JKAMPQ9P055 326 aa9.61□□□□□ -0.87
CHPF2-201ENST00000035307 TRAV8-6A0A0B4J262 113 aa9.6□□□□□ -0.87
CHPF2-201ENST00000035307 C3orf79P0CE67 100 aa9.6□□□□□ -0.87
CHPF2-201ENST00000035307 SLC25A34Q6PIV7 304 aa9.6□□□□□ -0.87
CHPF2-201ENST00000035307 TMEM160Q9NX00 188 aa9.6□□□□□ -0.87
CHPF2-201ENST00000035307 GCN1Q92616 2671 aaKnown RBP9.6□□□□□ -0.87
CHPF2-201ENST00000035307 hDV102S1A0JD36 115 aa9.6□□□□□ -0.87
CHPF2-201ENST00000035307 J3QKU1 62 aa9.6□□□□□ -0.87
CHPF2-201ENST00000035307 EREGO14944 169 aa9.6□□□□□ -0.87
CHPF2-201ENST00000035307 NDUFB8O95169 186 aa9.6□□□□□ -0.87
CHPF2-201ENST00000035307 ERCC8Q13216 396 aa9.6□□□□□ -0.87
CHPF2-201ENST00000035307 SLAQ13239 276 aa9.6□□□□□ -0.87
CHPF2-201ENST00000035307 FER1L6-AS1Q8NA97 138 aa9.6□□□□□ -0.87
CHPF2-201ENST00000035307 SPRY2O43597 315 aa9.59□□□□□ -0.87
CHPF2-201ENST00000035307 PRTN3P24158 256 aa9.59□□□□□ -0.87
CHPF2-201ENST00000035307 ZNF833PQ6ZTB9 187 aa9.59□□□□□ -0.87
CHPF2-201ENST00000035307 SLC25A2Q9BXI2 301 aa9.59□□□□□ -0.87
CHPF2-201ENST00000035307 NPFFO15130 113 aa9.59□□□□□ -0.87
CHPF2-201ENST00000035307 IGHV4-38-2P0DP08 117 aa9.59□□□□□ -0.87
CHPF2-201ENST00000035307 PSG9Q00887 426 aa9.59□□□□□ -0.87
CHPF2-201ENST00000035307 TMEM95Q3KNT9 176 aa9.59□□□□□ -0.87
CHPF2-201ENST00000035307 MYOZ3Q8TDC0 251 aa9.59□□□□□ -0.87
CHPF2-201ENST00000035307 GNB1LQ9BYB4 327 aa9.59□□□□□ -0.87
CHPF2-201ENST00000035307 PARD6GQ9BYG4 376 aaPredicted RBP9.59□□□□□ -0.87
CHPF2-201ENST00000035307 ARMS2P0C7Q2 107 aa9.59□□□□□ -0.87
CHPF2-201ENST00000035307 HLA-DMBP28068 263 aa9.59□□□□□ -0.87
CHPF2-201ENST00000035307 TMEM75Q8N9X5 138 aa9.59□□□□□ -0.87
CHPF2-201ENST00000035307 MAP1LC3AQ9H492 121 aa9.59□□□□□ -0.87
CHPF2-201ENST00000035307 C11orf1Q9H5F2 150 aa9.59□□□□□ -0.87
CHPF2-201ENST00000035307 C3orf36Q3SXR2 165 aa9.58□□□□□ -0.88
CHPF2-201ENST00000035307 SFTA2Q6UW10 78 aa9.58□□□□□ -0.88
CHPF2-201ENST00000035307 RCHY1Q96PM5 261 aa9.58□□□□□ -0.88
CHPF2-201ENST00000035307 KRTAP10-9P60411 292 aa9.58□□□□□ -0.88
CHPF2-201ENST00000035307 Q1RN00 199 aa9.58□□□□□ -0.88
CHPF2-201ENST00000035307 CENPVQ7Z7K6 275 aaPredicted RBP9.58□□□□□ -0.88
CHPF2-201ENST00000035307 RNASE4P34096 147 aaKnown RBP9.58□□□□□ -0.88
CHPF2-201ENST00000035307 PRR20EP86478 221 aa9.58□□□□□ -0.88
CHPF2-201ENST00000035307 PRR20CP86479 221 aa9.58□□□□□ -0.88
CHPF2-201ENST00000035307 PRR20DP86480 221 aa9.58□□□□□ -0.88
CHPF2-201ENST00000035307 PRR20BP86481 221 aa9.58□□□□□ -0.88
CHPF2-201ENST00000035307 PRR20AP86496 221 aa9.58□□□□□ -0.88
CHPF2-201ENST00000035307 LYZL1Q6UWQ5 148 aa9.58□□□□□ -0.88
CHPF2-201ENST00000035307 LINC00614P0C842 121 aa9.57□□□□□ -0.88
CHPF2-201ENST00000035307 SAPCD1Q5SSQ6 148 aa9.57□□□□□ -0.88
CHPF2-201ENST00000035307 AMN1Q8IY45 258 aa9.57□□□□□ -0.88
CHPF2-201ENST00000035307 TRGV9Q99603 122 aa9.57□□□□□ -0.88
CHPF2-201ENST00000035307 H7C2G1 150 aa9.57□□□□□ -0.88
CHPF2-201ENST00000035307 DYNLRB2Q8TF09 96 aa9.57□□□□□ -0.88
CHPF2-201ENST00000035307 C8orf49Q96NF6 230 aa9.57□□□□□ -0.88
CHPF2-201ENST00000035307 V9GYV3 84 aa9.57□□□□□ -0.88
CHPF2-201ENST00000035307 TMEM213A2RRL7 107 aa9.57□□□□□ -0.88
CHPF2-201ENST00000035307 D6R8Y8 96 aa9.57□□□□□ -0.88
CHPF2-201ENST00000035307 M0QZK8 103 aa9.57□□□□□ -0.88
CHPF2-201ENST00000035307 SRSF9Q13242 221 aaKnown RBP eCLIP9.57□□□□□ -0.887e-7■■■□□ 17.7
CHPF2-201ENST00000035307 ZNF414Q96IQ9 312 aa9.57□□□□□ -0.88
CHPF2-201ENST00000035307 H3BVH4 76 aa9.56□□□□□ -0.88
CHPF2-201ENST00000035307 MSMBP08118 114 aa9.56□□□□□ -0.88
CHPF2-201ENST00000035307 CACNG7P62955 275 aa9.56□□□□□ -0.88
CHPF2-201ENST00000035307 PVRIGQ6DKI7 326 aa9.56□□□□□ -0.88
CHPF2-201ENST00000035307 B4DSR2 109 aa9.56□□□□□ -0.88
CHPF2-201ENST00000035307 Q6ZWC4 215 aa9.56□□□□□ -0.88
CHPF2-201ENST00000035307 ZFP30Q9Y2G7 519 aa9.56□□□□□ -0.88
CHPF2-201ENST00000035307 POLR3KQ9Y2Y1 108 aaPredicted RBP9.56□□□□□ -0.88
CHPF2-201ENST00000035307 ATP6V0E1O15342 81 aa9.56□□□□□ -0.88
CHPF2-201ENST00000035307 TDRG1Q3Y452 100 aa9.56□□□□□ -0.88
CHPF2-201ENST00000035307 TMEM97Q5BJF2 176 aa9.56□□□□□ -0.88
CHPF2-201ENST00000035307 FOXC2Q99958 501 aa9.56□□□□□ -0.88
CHPF2-201ENST00000035307 ORMDL3Q8N138 153 aa9.56□□□□□ -0.88
CHPF2-201ENST00000035307 Q8N7P7 452 aa9.56□□□□□ -0.88
CHPF2-201ENST00000035307 MIEN1Q9BRT3 115 aa9.56□□□□□ -0.88
CHPF2-201ENST00000035307 IGLC7A0M8Q6 106 aa9.55□□□□□ -0.88
CHPF2-201ENST00000035307 SCGB1C2P0DMR2 95 aa9.55□□□□□ -0.88
CHPF2-201ENST00000035307 MAJINQ3KP22 176 aa9.55□□□□□ -0.88
CHPF2-201ENST00000035307 TNFRSF14Q92956 283 aa9.55□□□□□ -0.88
CHPF2-201ENST00000035307 LAMTOR2Q9Y2Q5 125 aa9.55□□□□□ -0.88
CHPF2-201ENST00000035307 DGAT2L7PQ6IED9 249 aa9.55□□□□□ -0.88
CHPF2-201ENST00000035307 DDB2Q92466 427 aa9.55□□□□□ -0.88
CHPF2-201ENST00000035307 A0A1W2PS18 150 aa9.55□□□□□ -0.88
CHPF2-201ENST00000035307 FBXL19-AS1Q494R0 122 aa9.55□□□□□ -0.88
CHPF2-201ENST00000035307 IGHV2-70DA0A0C4DH43 119 aa9.54□□□□□ -0.88
CHPF2-201ENST00000035307 FABP5P3A8MUU1 101 aa9.54□□□□□ -0.88
CHPF2-201ENST00000035307 ZNF56Q15929 161 aa9.54□□□□□ -0.88
CHPF2-201ENST00000035307 FAM106AQ4KMX7 169 aa9.54□□□□□ -0.88
CHPF2-201ENST00000035307 PATE2Q6UY27 113 aa9.54□□□□□ -0.88
CHPF2-201ENST00000035307 EBLN2Q6P2I7 272 aa9.54□□□□□ -0.88
CHPF2-201ENST00000035307 ZNF256Q9Y2P7 627 aaPredicted RBP9.54□□□□□ -0.88
CHPF2-201ENST00000035307 ITGB1BP1O14713 200 aa9.54□□□□□ -0.88
CHPF2-201ENST00000035307 ZNF688P0C7X2 276 aa9.54□□□□□ -0.88
CHPF2-201ENST00000035307 DYNAPQ8N1N2 210 aa9.54□□□□□ -0.88
CHPF2-201ENST00000035307 C18orf32Q8TCD1 76 aa9.54□□□□□ -0.88
CHPF2-201ENST00000035307 FXYD5Q96DB9 178 aa9.54□□□□□ -0.88
CHPF2-201ENST00000035307 KAAG1Q9UBP8 84 aa9.54□□□□□ -0.88
CHPF2-201ENST00000035307 ITPR1Q14643 2758 aa9.54□□□□□ -0.88
CHPF2-201ENST00000035307 BLCAPP62952 87 aa9.53□□□□□ -0.88
CHPF2-201ENST00000035307 Q86TA4 180 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms