RNA–Protein interactions for RNA: ENST00000642072.1

LINC00339-212, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 338 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-212ENST00000642072 CDKN1BP46527 198 aa5.87□□□□□ -1.47
LINC00339-212ENST00000642072 PSG3Q16557 428 aa5.87□□□□□ -1.47
LINC00339-212ENST00000642072 BPIFCQ8NFQ6 507 aa5.87□□□□□ -1.47
LINC00339-212ENST00000642072 OR1S1Q8NH92 325 aa5.87□□□□□ -1.47
LINC00339-212ENST00000642072 S100ZQ8WXG8 99 aa5.87□□□□□ -1.47
LINC00339-212ENST00000642072 TMEM147Q9BVK8 224 aa5.87□□□□□ -1.47
LINC00339-212ENST00000642072 KCNIP3Q9Y2W7 256 aa5.87□□□□□ -1.47
LINC00339-212ENST00000642072 CTDSPLO15194 276 aa5.86□□□□□ -1.47
LINC00339-212ENST00000642072 AKR1C4P17516 323 aa5.86□□□□□ -1.47
LINC00339-212ENST00000642072 RPL7P18124 248 aaKnown RBP5.86□□□□□ -1.47
LINC00339-212ENST00000642072 PLP1P60201 277 aa5.86□□□□□ -1.47
LINC00339-212ENST00000642072 RAB11AP62491 216 aa5.86□□□□□ -1.47
LINC00339-212ENST00000642072 RHOBP62745 196 aa5.86□□□□□ -1.47
LINC00339-212ENST00000642072 SRPXP78539 464 aa5.86□□□□□ -1.47
LINC00339-212ENST00000642072 FGL1Q08830 312 aa5.86□□□□□ -1.47
LINC00339-212ENST00000642072 GFI1BQ5VTD9 330 aa5.86□□□□□ -1.47
LINC00339-212ENST00000642072 ACOT7LQ6ZUV0 252 aa5.86□□□□□ -1.47
LINC00339-212ENST00000642072 FRZBQ92765 325 aa5.86□□□□□ -1.47
LINC00339-212ENST00000642072 RPUSD4Q96CM3 377 aaKnown RBP5.86□□□□□ -1.47
LINC00339-212ENST00000642072 C20orf144Q9BQM9 153 aa5.86□□□□□ -1.47
LINC00339-212ENST00000642072 PARD6GQ9BYG4 376 aaPredicted RBP5.86□□□□□ -1.47
LINC00339-212ENST00000642072 TMPRSS5Q9H3S3 457 aa5.86□□□□□ -1.47
LINC00339-212ENST00000642072 DUXBA0A1W2PPF3 345 aa5.85□□□□□ -1.47
LINC00339-212ENST00000642072 ANKRD20A5PA0PJZ0 165 aa5.85□□□□□ -1.47
LINC00339-212ENST00000642072 GAGE12BA1L429 117 aa5.85□□□□□ -1.47
LINC00339-212ENST00000642072 CTDSP2O14595 271 aa5.85□□□□□ -1.47
LINC00339-212ENST00000642072 ADAP1O75689 374 aa5.85□□□□□ -1.47
LINC00339-212ENST00000642072 GAGE7O76087 117 aa5.85□□□□□ -1.47
LINC00339-212ENST00000642072 GAGE12FP0CL80 117 aa5.85□□□□□ -1.47
LINC00339-212ENST00000642072 GAGE12GP0CL81 117 aa5.85□□□□□ -1.47
LINC00339-212ENST00000642072 GAGE12IP0CL82 117 aa5.85□□□□□ -1.47
LINC00339-212ENST00000642072 DNAH10OSP0CZ25 163 aa5.85□□□□□ -1.47
LINC00339-212ENST00000642072 SLC25A6P12236 298 aa5.85□□□□□ -1.47
LINC00339-212ENST00000642072 ERVFC1-1P60608 527 aa5.85□□□□□ -1.47
LINC00339-212ENST00000642072 DAZ2Q13117 558 aaKnown RBP5.85□□□□□ -1.47
LINC00339-212ENST00000642072 ZNF846Q147U1 533 aa5.85□□□□□ -1.47
LINC00339-212ENST00000642072 Q6ZTI0 123 aa5.85□□□□□ -1.47
LINC00339-212ENST00000642072 LRTM2Q8N967 370 aa5.85□□□□□ -1.47
LINC00339-212ENST00000642072 ZBTB8BQ8NAP8 495 aaPredicted RBP5.85□□□□□ -1.47
LINC00339-212ENST00000642072 C18orf15Q96N68 181 aa5.85□□□□□ -1.47
LINC00339-212ENST00000642072 TNFRSF18Q9Y5U5 241 aa5.85□□□□□ -1.47
LINC00339-212ENST00000642072 A0A087WTM6 91 aa5.84□□□□□ -1.47
LINC00339-212ENST00000642072 PRAC2D3DTV9 90 aa5.84□□□□□ -1.47
LINC00339-212ENST00000642072 SIVA1O15304 175 aa5.84□□□□□ -1.47
LINC00339-212ENST00000642072 SYNGR2O43760 224 aa5.84□□□□□ -1.47
LINC00339-212ENST00000642072 PFDN1O60925 122 aa5.84□□□□□ -1.47
LINC00339-212ENST00000642072 HYPMO75409 117 aa5.84□□□□□ -1.47
LINC00339-212ENST00000642072 RLN2P04090 185 aa5.84□□□□□ -1.47
LINC00339-212ENST00000642072 ANXA3P12429 323 aa5.84□□□□□ -1.47
LINC00339-212ENST00000642072 S100A7P31151 101 aa5.84□□□□□ -1.47
LINC00339-212ENST00000642072 AKR1C1Q04828 323 aa5.84□□□□□ -1.47
LINC00339-212ENST00000642072 PATE2Q6UY27 113 aa5.84□□□□□ -1.47
LINC00339-212ENST00000642072 CYP2G1PQ6ZSU1 146 aa5.84□□□□□ -1.47
LINC00339-212ENST00000642072 C11orf72Q8NBR9 251 aa5.84□□□□□ -1.47
LINC00339-212ENST00000642072 CIB3Q96Q77 187 aaPredicted RBP5.84□□□□□ -1.47
LINC00339-212ENST00000642072 ZNF331Q9NQX6 463 aaPredicted RBP5.84□□□□□ -1.47
LINC00339-212ENST00000642072 MDFICQ9P1T7 246 aa5.84□□□□□ -1.47
LINC00339-212ENST00000642072 PAIP2BQ9ULR5 123 aaKnown RBP5.84□□□□□ -1.47
LINC00339-212ENST00000642072 HIGD1AQ9Y241 93 aa5.84□□□□□ -1.47
LINC00339-212ENST00000642072 FAT3Q8TDW7 4589 aa5.83□□□□□ -1.48
LINC00339-212ENST00000642072 LINC00854A0A1B0GVQ3 168 aa5.83□□□□□ -1.48
LINC00339-212ENST00000642072 PMS2P5A8MQ11 134 aa5.83□□□□□ -1.48
LINC00339-212ENST00000642072 H3BP45 60 aa5.83□□□□□ -1.48
LINC00339-212ENST00000642072 K7EPK0 472 aa5.83□□□□□ -1.48
LINC00339-212ENST00000642072 SLC17A3O00476 420 aa5.83□□□□□ -1.48
LINC00339-212ENST00000642072 MED6O75586 246 aa5.83□□□□□ -1.48
LINC00339-212ENST00000642072 NXPH4O95158 308 aa5.83□□□□□ -1.48
LINC00339-212ENST00000642072 SMR3BP02814 79 aaPredicted RBP5.83□□□□□ -1.48
LINC00339-212ENST00000642072 IL5P05113 134 aa5.83□□□□□ -1.48
LINC00339-212ENST00000642072 LINC00869P0C866 280 aa5.83□□□□□ -1.48
LINC00339-212ENST00000642072 CXCL2P19875 107 aa5.83□□□□□ -1.48
LINC00339-212ENST00000642072 RAP2BP61225 183 aa5.83□□□□□ -1.48
LINC00339-212ENST00000642072 ICAM4Q14773 271 aa5.83□□□□□ -1.48
LINC00339-212ENST00000642072 SPCS2Q15005 226 aa5.83□□□□□ -1.48
LINC00339-212ENST00000642072 RGS21Q2M5E4 152 aa5.83□□□□□ -1.48
LINC00339-212ENST00000642072 C4orf46Q504U0 113 aa5.83□□□□□ -1.48
LINC00339-212ENST00000642072 DYNC2LI1Q8TCX1 351 aa5.83□□□□□ -1.48
LINC00339-212ENST00000642072 SCGB3A2Q96PL1 93 aa5.83□□□□□ -1.48
LINC00339-212ENST00000642072 PPP1R14DQ9NXH3 145 aa5.83□□□□□ -1.48
LINC00339-212ENST00000642072 SCP2D1Q9UJQ7 156 aa5.83□□□□□ -1.48
LINC00339-212ENST00000642072 PIGBOS1A0A0B4J2F0 54 aa5.82□□□□□ -1.48
LINC00339-212ENST00000642072 SNURFLB1AK76 121 aa5.82□□□□□ -1.48
LINC00339-212ENST00000642072 WRBO00258 174 aa5.82□□□□□ -1.48
LINC00339-212ENST00000642072 EREGO14944 169 aa5.82□□□□□ -1.48
LINC00339-212ENST00000642072 RGS5O15539 181 aa5.82□□□□□ -1.48
LINC00339-212ENST00000642072 OR5G3P0C626 314 aa5.82□□□□□ -1.48
LINC00339-212ENST00000642072 CT45A10P0DMU9 189 aa5.82□□□□□ -1.48
LINC00339-212ENST00000642072 RPP30P78346 268 aaKnown RBP5.82□□□□□ -1.48
LINC00339-212ENST00000642072 TMEM128Q5BJH2 165 aa5.82□□□□□ -1.48
LINC00339-212ENST00000642072 SPANXN5Q5MJ07 72 aa5.82□□□□□ -1.48
LINC00339-212ENST00000642072 TEPPQ6URK8 271 aa5.82□□□□□ -1.48
LINC00339-212ENST00000642072 LCN15Q6UWW0 184 aa5.82□□□□□ -1.48
LINC00339-212ENST00000642072 TMED4Q7Z7H5 227 aa5.82□□□□□ -1.48
LINC00339-212ENST00000642072 CCDC28AQ8IWP9 274 aa5.82□□□□□ -1.48
LINC00339-212ENST00000642072 ODF3Q96PU9 254 aa5.82□□□□□ -1.48
LINC00339-212ENST00000642072 CCDC59Q9P031 241 aaKnown RBP5.82□□□□□ -1.48
LINC00339-212ENST00000642072 RABL2BQ9UNT1 228 aa5.82□□□□□ -1.48
LINC00339-212ENST00000642072 NPIPB6E9PJ23 425 aa5.81□□□□□ -1.48
LINC00339-212ENST00000642072 CCNKO75909 580 aa5.81□□□□□ -1.48
LINC00339-212ENST00000642072 SNRPCP09234 159 aaKnown RBP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms