RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	PHLDA1	Q8WV24	401 aa	Predicted RBP	10.88	□□□□□ -0.67
PHGDH-231	ENST00000641939	OR5AC2	Q9NZP5	309 aa		10.88	□□□□□ -0.67
PHGDH-231	ENST00000641939	KLK5	Q9Y337	293 aa	Predicted RBP	10.88	□□□□□ -0.67
PHGDH-231	ENST00000641939		A8MTW9	85 aa		10.87	□□□□□ -0.67
PHGDH-231	ENST00000641939		H0YIZ8	118 aa		10.87	□□□□□ -0.67
PHGDH-231	ENST00000641939	MPDU1	O75352	247 aa		10.87	□□□□□ -0.67
PHGDH-231	ENST00000641939	FGF7	P21781	194 aa		10.87	□□□□□ -0.67
PHGDH-231	ENST00000641939	B2M	P61769	119 aa		10.87	□□□□□ -0.67
PHGDH-231	ENST00000641939	OR5C1	Q8NGR4	320 aa		10.87	□□□□□ -0.67
PHGDH-231	ENST00000641939	PPP1R1C	Q8WVI7	109 aa		10.87	□□□□□ -0.67
PHGDH-231	ENST00000641939	PFDN5	Q99471	154 aa		10.87	□□□□□ -0.67
PHGDH-231	ENST00000641939	SLC35B3	Q9H1N7	401 aa		10.87	□□□□□ -0.67
PHGDH-231	ENST00000641939	HRH4	Q9H3N8	390 aa		10.87	□□□□□ -0.67
PHGDH-231	ENST00000641939	SLC39A9	Q9NUM3	307 aa		10.87	□□□□□ -0.67
PHGDH-231	ENST00000641939	DUSP14	O95147	198 aa	Known RBP	10.86	□□□□□ -0.67
PHGDH-231	ENST00000641939	CXCL2	P19875	107 aa		10.86	□□□□□ -0.67
PHGDH-231	ENST00000641939	CXCL3	P19876	107 aa		10.86	□□□□□ -0.67
PHGDH-231	ENST00000641939	MORN5	Q5VZ52	161 aa		10.86	□□□□□ -0.67
PHGDH-231	ENST00000641939	LCN15	Q6UWW0	184 aa		10.86	□□□□□ -0.67
PHGDH-231	ENST00000641939	ZNF705A	Q6ZN79	300 aa	Predicted RBP	10.86	□□□□□ -0.67
PHGDH-231	ENST00000641939	ZNF738	Q8NE65	137 aa		10.86	□□□□□ -0.67
PHGDH-231	ENST00000641939	PXMP4	Q9Y6I8	212 aa		10.86	□□□□□ -0.67
PHGDH-231	ENST00000641939	PET100	P0DJ07	73 aa		10.85	□□□□□ -0.67
PHGDH-231	ENST00000641939	CNN1	P51911	297 aa	Known RBP	10.85	□□□□□ -0.67
PHGDH-231	ENST00000641939	PSG3	Q16557	428 aa		10.85	□□□□□ -0.67
PHGDH-231	ENST00000641939	AMTN	Q6UX39	209 aa		10.85	□□□□□ -0.67
PHGDH-231	ENST00000641939	NEU1	Q99519	415 aa		10.85	□□□□□ -0.67
PHGDH-231	ENST00000641939	SLC50A1	Q9BRV3	221 aa		10.85	□□□□□ -0.67
PHGDH-231	ENST00000641939	IGHV3OR16-12	A0A075B7B8	117 aa		10.84	□□□□□ -0.67
PHGDH-231	ENST00000641939	SMIM9	A6NGZ8	99 aa		10.84	□□□□□ -0.67
PHGDH-231	ENST00000641939	ZNF705F	A8MVS1	300 aa	Predicted RBP	10.84	□□□□□ -0.67
PHGDH-231	ENST00000641939	MPC2	O95563	127 aa		10.84	□□□□□ -0.67
PHGDH-231	ENST00000641939	PTTG1	O95997	202 aa		10.84	□□□□□ -0.67
PHGDH-231	ENST00000641939	SNRPC	P09234	159 aa	Known RBP	10.84	□□□□□ -0.67
PHGDH-231	ENST00000641939	ZNF705D	P0CH99	300 aa	Predicted RBP	10.84	□□□□□ -0.67
PHGDH-231	ENST00000641939	ZNF705B	P0CI00	300 aa	Predicted RBP	10.84	□□□□□ -0.67
PHGDH-231	ENST00000641939	HLA-DMB	P28068	263 aa		10.84	□□□□□ -0.67
PHGDH-231	ENST00000641939	CLINT1	Q14677	625 aa		10.84	□□□□□ -0.67
PHGDH-231	ENST00000641939	OR11H7	Q8NGC8	314 aa		10.84	□□□□□ -0.67
PHGDH-231	ENST00000641939	RNF126	Q9BV68	326 aa		10.84	□□□□□ -0.67
PHGDH-231	ENST00000641939	NPCDR1	Q9BY65	106 aa		10.84	□□□□□ -0.67
PHGDH-231	ENST00000641939	ZNF331	Q9NQX6	463 aa	Predicted RBP	10.84	□□□□□ -0.67
PHGDH-231	ENST00000641939	GOLT1B	Q9Y3E0	138 aa		10.84	□□□□□ -0.67
PHGDH-231	ENST00000641939	TRAV5	A0A0B4J249	113 aa		10.83	□□□□□ -0.68
PHGDH-231	ENST00000641939	IGLC2	P0DOY2	106 aa		10.83	□□□□□ -0.68
PHGDH-231	ENST00000641939	OR8A1	Q8NGG7	326 aa		10.83	□□□□□ -0.68
PHGDH-231	ENST00000641939	THAP6	Q8TBB0	222 aa		10.83	□□□□□ -0.68
PHGDH-231	ENST00000641939	ALG5	Q9Y673	324 aa		10.83	□□□□□ -0.68
PHGDH-231	ENST00000641939	HYDIN	Q4G0P3	5121 aa		10.83	□□□□□ -0.68
PHGDH-231	ENST00000641939	C11orf94	C9JXX5	98 aa		10.82	□□□□□ -0.68
PHGDH-231	ENST00000641939	AMBP	P02760	352 aa		10.82	□□□□□ -0.68
PHGDH-231	ENST00000641939	HIST1H1A	Q02539	215 aa	Predicted RBP	10.82	□□□□□ -0.68
PHGDH-231	ENST00000641939	C1orf158	Q8N1D5	194 aa		10.82	□□□□□ -0.68
PHGDH-231	ENST00000641939	LINC00476	Q8WZB0	136 aa		10.82	□□□□□ -0.68
PHGDH-231	ENST00000641939	RPUSD4	Q96CM3	377 aa	Known RBP	10.82	□□□□□ -0.68
PHGDH-231	ENST00000641939	IGF2BP2-AS1	Q96M15	143 aa		10.82	□□□□□ -0.68
PHGDH-231	ENST00000641939	RFNG	Q9Y644	331 aa		10.82	□□□□□ -0.68
PHGDH-231	ENST00000641939	KMT2A	Q03164	3969 aa		10.82	□□□□□ -0.68
PHGDH-231	ENST00000641939	TMEM189	A5PLL7	270 aa		10.81	□□□□□ -0.68
PHGDH-231	ENST00000641939		H3BQ15	152 aa		10.81	□□□□□ -0.68
PHGDH-231	ENST00000641939		H3BTX0	84 aa		10.81	□□□□□ -0.68
PHGDH-231	ENST00000641939	SLC17A3	O00476	420 aa		10.81	□□□□□ -0.68
PHGDH-231	ENST00000641939	GUK1	Q16774	197 aa		10.81	□□□□□ -0.68
PHGDH-231	ENST00000641939	SPINK13	Q1W4C9	94 aa		10.81	□□□□□ -0.68
PHGDH-231	ENST00000641939	SAT2	Q96F10	170 aa	Predicted RBP	10.81	□□□□□ -0.68
PHGDH-231	ENST00000641939	ATP5S	Q99766	215 aa		10.81	□□□□□ -0.68
PHGDH-231	ENST00000641939	WDR61	Q9GZS3	305 aa	Known RBP	10.81	□□□□□ -0.68
PHGDH-231	ENST00000641939	CELA1	Q9UNI1	258 aa		10.81	□□□□□ -0.68
PHGDH-231	ENST00000641939	HSPB11	Q9Y547	144 aa		10.81	□□□□□ -0.68
PHGDH-231	ENST00000641939		M0R2Z0	102 aa		10.8	□□□□□ -0.68
PHGDH-231	ENST00000641939	INS	P01308	110 aa		10.8	□□□□□ -0.68
PHGDH-231	ENST00000641939	RPL12	P30050	165 aa	Known RBP	10.8	□□□□□ -0.68
PHGDH-231	ENST00000641939	RHOB	P62745	196 aa		10.8	□□□□□ -0.68
PHGDH-231	ENST00000641939	GCSAML	Q5JQS6	135 aa		10.8	□□□□□ -0.68
PHGDH-231	ENST00000641939		Q6ZTC4	211 aa		10.8	□□□□□ -0.68
PHGDH-231	ENST00000641939	C2CD4C	Q8TF44	421 aa		10.8	□□□□□ -0.68
PHGDH-231	ENST00000641939	KCNIP2	Q9NS61	270 aa		10.8	□□□□□ -0.68
PHGDH-231	ENST00000641939	PPP1R14D	Q9NXH3	145 aa		10.8	□□□□□ -0.68
PHGDH-231	ENST00000641939	TMEM14C	Q9P0S9	112 aa		10.8	□□□□□ -0.68
PHGDH-231	ENST00000641939	MBD2	Q9UBB5	411 aa		10.8	□□□□□ -0.68
PHGDH-231	ENST00000641939	C17orf112	F2Z3M2	114 aa		10.79	□□□□□ -0.68
PHGDH-231	ENST00000641939	BOLA2-SMG1P6	H3BVE0	249 aa		10.79	□□□□□ -0.68
PHGDH-231	ENST00000641939	CRX	O43186	299 aa	Predicted RBP	10.79	□□□□□ -0.68
PHGDH-231	ENST00000641939	LY6G6C	O95867	125 aa		10.79	□□□□□ -0.68
PHGDH-231	ENST00000641939	HBE1	P02100	147 aa		10.79	□□□□□ -0.68
PHGDH-231	ENST00000641939	PRB4	P10163	310 aa	Predicted RBP	10.79	□□□□□ -0.68
PHGDH-231	ENST00000641939	EMP1	P54849	157 aa		10.79	□□□□□ -0.68
PHGDH-231	ENST00000641939	C12orf74	Q32Q52	190 aa		10.79	□□□□□ -0.68
PHGDH-231	ENST00000641939	TMEM208	Q9BTX3	173 aa		10.79	□□□□□ -0.68
PHGDH-231	ENST00000641939	ZNF586	Q9NXT0	402 aa		10.79	□□□□□ -0.68
PHGDH-231	ENST00000641939	TRAV10	A0A0B4J240	114 aa		10.78	□□□□□ -0.68
PHGDH-231	ENST00000641939	ZNF253	O75346	499 aa		10.78	□□□□□ -0.68
PHGDH-231	ENST00000641939	SPART-AS1	P0CW21	52 aa		10.78	□□□□□ -0.68
PHGDH-231	ENST00000641939	HIST1H1E	P10412	219 aa	Known RBP	10.78	□□□□□ -0.68
PHGDH-231	ENST00000641939	RRN3P1	Q2M238	152 aa		10.78	□□□□□ -0.68
PHGDH-231	ENST00000641939	BAP18	Q8IXM2	172 aa		10.78	□□□□□ -0.68
PHGDH-231	ENST00000641939	OR10J6P	Q8NGY7	276 aa		10.78	□□□□□ -0.68
PHGDH-231	ENST00000641939	MED28	Q9H204	178 aa		10.78	□□□□□ -0.68
PHGDH-231	ENST00000641939	TRBV19	A0A075B6N1	114 aa		10.77	□□□□□ -0.69
PHGDH-231	ENST00000641939	TRAV12-2	A0A075B6T6	113 aa		10.77	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms