RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 LINC00305Q7Z4B0 112 aa7.42□□□□□ -1.22
PHGDH-222ENST00000641587 GPHB5Q86YW7 130 aa7.42□□□□□ -1.22
PHGDH-222ENST00000641587 IQCF2Q8IXL9 164 aa7.42□□□□□ -1.22
PHGDH-222ENST00000641587 PCNPQ8WW12 178 aaKnown RBP7.42□□□□□ -1.22
PHGDH-222ENST00000641587 MRPL32Q9BYC8 188 aaKnown RBP7.42□□□□□ -1.22
PHGDH-222ENST00000641587 TECRQ9NZ01 308 aaKnown RBP7.42□□□□□ -1.22
PHGDH-222ENST00000641587 PFDN2Q9UHV9 154 aa7.42□□□□□ -1.22
PHGDH-222ENST00000641587 UFC1Q9Y3C8 167 aa7.42□□□□□ -1.22
PHGDH-222ENST00000641587 PKHD1P08F94 4074 aa7.42□□□□□ -1.22
PHGDH-222ENST00000641587 DNAH2Q9P225 4427 aa7.42□□□□□ -1.22
PHGDH-222ENST00000641587 IGHV3OR16-13A0A075B7E8 117 aa7.41□□□□□ -1.22
PHGDH-222ENST00000641587 IGHV3-74A0A0B4J1X5 117 aa7.41□□□□□ -1.22
PHGDH-222ENST00000641587 CTXND1A0A1B0GTU2 59 aa7.41□□□□□ -1.22
PHGDH-222ENST00000641587 MAP1LC3B2A6NCE7 125 aa7.41□□□□□ -1.22
PHGDH-222ENST00000641587 LGALS9O00182 355 aa7.41□□□□□ -1.22
PHGDH-222ENST00000641587 H2AFB1P0C5Y9 115 aa7.41□□□□□ -1.22
PHGDH-222ENST00000641587 TAS2R45P59539 299 aa7.41□□□□□ -1.22
PHGDH-222ENST00000641587 BLOC1S1P78537 153 aa7.41□□□□□ -1.22
PHGDH-222ENST00000641587 LEMD1Q68G75 181 aa7.41□□□□□ -1.22
PHGDH-222ENST00000641587 LCN15Q6UWW0 184 aa7.41□□□□□ -1.22
PHGDH-222ENST00000641587 PATE2Q6UY27 113 aa7.41□□□□□ -1.22
PHGDH-222ENST00000641587 MIR17HGQ75NE6 70 aa7.41□□□□□ -1.22
PHGDH-222ENST00000641587 LRRC20Q8TCA0 184 aa7.41□□□□□ -1.22
PHGDH-222ENST00000641587 TMEM37Q8WXS4 190 aa7.41□□□□□ -1.22
PHGDH-222ENST00000641587 RAB24Q969Q5 203 aa7.41□□□□□ -1.22
PHGDH-222ENST00000641587 ZNF414Q96IQ9 312 aa7.41□□□□□ -1.22
PHGDH-222ENST00000641587 SCRT1Q9BWW7 348 aa7.41□□□□□ -1.22
PHGDH-222ENST00000641587 SLC25A39Q9BZJ4 359 aaPredicted RBP7.41□□□□□ -1.22
PHGDH-222ENST00000641587 MAP1LC3BQ9GZQ8 125 aa7.41□□□□□ -1.22
PHGDH-222ENST00000641587 SEPSECSQ9HD40 501 aaKnown RBP7.41□□□□□ -1.22
PHGDH-222ENST00000641587 DAZ1Q9NQZ3 744 aaKnown RBP7.41□□□□□ -1.22
PHGDH-222ENST00000641587 FUT9Q9Y231 359 aa7.41□□□□□ -1.22
PHGDH-222ENST00000641587 TRAV5A0A0B4J249 113 aa7.4□□□□□ -1.22
PHGDH-222ENST00000641587 IGHV3-66A0A0C4DH42 116 aa7.4□□□□□ -1.22
PHGDH-222ENST00000641587 H3BRN7 92 aa7.4□□□□□ -1.22
PHGDH-222ENST00000641587 TEX46H3BTG2 121 aa7.4□□□□□ -1.22
PHGDH-222ENST00000641587 SPRY2O43597 315 aa7.4□□□□□ -1.22
PHGDH-222ENST00000641587 OR7C2O60412 319 aa7.4□□□□□ -1.22
PHGDH-222ENST00000641587 BMI1P35226 326 aa7.4□□□□□ -1.22
PHGDH-222ENST00000641587 FGF8P55075 233 aaPredicted RBP7.4□□□□□ -1.22
PHGDH-222ENST00000641587 ZNF726P1Q15940 193 aa7.4□□□□□ -1.22
PHGDH-222ENST00000641587 KHDC3LQ587J8 217 aa7.4□□□□□ -1.22
PHGDH-222ENST00000641587 MORN5Q5VZ52 161 aa7.4□□□□□ -1.22
PHGDH-222ENST00000641587 WFDC3Q8IUB2 231 aa7.4□□□□□ -1.22
PHGDH-222ENST00000641587 SFT2D1Q8WV19 159 aa7.4□□□□□ -1.22
PHGDH-222ENST00000641587 GRAMD2BQ96HH9 432 aa7.4□□□□□ -1.22
PHGDH-222ENST00000641587 SHANK2-AS3Q9BTD1 123 aa7.4□□□□□ -1.22
PHGDH-222ENST00000641587 MRPL27Q9P0M9 148 aaKnown RBP7.4□□□□□ -1.22
PHGDH-222ENST00000641587 RNF24Q9Y225 148 aa7.4□□□□□ -1.22
PHGDH-222ENST00000641587 DYNC1H1Q14204 4646 aaKnown RBP7.4□□□□□ -1.23
PHGDH-222ENST00000641587 IGHV7-4-1A0A0J9YVY3 117 aa7.39□□□□□ -1.23
PHGDH-222ENST00000641587 ZNF98A6NK75 572 aa7.39□□□□□ -1.23
PHGDH-222ENST00000641587 A8MWP6 167 aa7.39□□□□□ -1.23
PHGDH-222ENST00000641587 RGS13O14921 159 aa7.39□□□□□ -1.23
PHGDH-222ENST00000641587 HBE1P02100 147 aa7.39□□□□□ -1.23
PHGDH-222ENST00000641587 ARL14EPLP0DKL9 152 aa7.39□□□□□ -1.23
PHGDH-222ENST00000641587 C8orf88P0DMB2 117 aa7.39□□□□□ -1.23
PHGDH-222ENST00000641587 SSX7Q7RTT5 188 aa7.39□□□□□ -1.23
PHGDH-222ENST00000641587 OR8I2Q8N0Y5 310 aa7.39□□□□□ -1.23
PHGDH-222ENST00000641587 PHLDA1Q8WV24 401 aaPredicted RBP7.39□□□□□ -1.23
PHGDH-222ENST00000641587 SAT2Q96F10 170 aaPredicted RBP7.39□□□□□ -1.23
PHGDH-222ENST00000641587 SLC25A2Q9BXI2 301 aa7.39□□□□□ -1.23
PHGDH-222ENST00000641587 HRH4Q9H3N8 390 aa7.39□□□□□ -1.23
PHGDH-222ENST00000641587 TMEM231Q9H6L2 316 aa7.39□□□□□ -1.23
PHGDH-222ENST00000641587 KLK5Q9Y337 293 aaPredicted RBP7.39□□□□□ -1.23
PHGDH-222ENST00000641587 A0A1W2PS18 150 aa7.38□□□□□ -1.23
PHGDH-222ENST00000641587 K7EMT4 169 aa7.38□□□□□ -1.23
PHGDH-222ENST00000641587 CXorf1O96002 111 aa7.38□□□□□ -1.23
PHGDH-222ENST00000641587 APOHP02749 345 aaPredicted RBP7.38□□□□□ -1.23
PHGDH-222ENST00000641587 NMBP08949 121 aa7.38□□□□□ -1.23
PHGDH-222ENST00000641587 RPL35AP18077 110 aaKnown RBP7.38□□□□□ -1.23
PHGDH-222ENST00000641587 CRYBB3P26998 211 aa7.38□□□□□ -1.23
PHGDH-222ENST00000641587 UBE2L3P68036 154 aaKnown RBP7.38□□□□□ -1.23
PHGDH-222ENST00000641587 LGALS9CQ6DKI2 356 aa7.38□□□□□ -1.23
PHGDH-222ENST00000641587 Q6ZWC4 215 aa7.38□□□□□ -1.23
PHGDH-222ENST00000641587 PAXXQ9BUH6 204 aa7.38□□□□□ -1.23
PHGDH-222ENST00000641587 TP53TG1Q9Y2A0 90 aa7.38□□□□□ -1.23
PHGDH-222ENST00000641587 OR10J4P0C629 311 aa7.37□□□□□ -1.23
PHGDH-222ENST00000641587 STAG3L2P0CL84 134 aa7.37□□□□□ -1.23
PHGDH-222ENST00000641587 STAG3L3P0CL85 134 aa7.37□□□□□ -1.23
PHGDH-222ENST00000641587 PYYP10082 97 aa7.37□□□□□ -1.23
PHGDH-222ENST00000641587 RPL7P18124 248 aaKnown RBP7.37□□□□□ -1.23
PHGDH-222ENST00000641587 ATF4P18848 351 aaPredicted RBP7.37□□□□□ -1.23
PHGDH-222ENST00000641587 GCHFRP30047 84 aa7.37□□□□□ -1.23
PHGDH-222ENST00000641587 GALR1P47211 349 aa7.37□□□□□ -1.23
PHGDH-222ENST00000641587 APOC4P55056 127 aa7.37□□□□□ -1.23
PHGDH-222ENST00000641587 RPL11P62913 178 aaKnown RBP7.37□□□□□ -1.23
PHGDH-222ENST00000641587 ODF3L2Q3SX64 289 aa7.37□□□□□ -1.23
PHGDH-222ENST00000641587 CLLU1Q5K131 121 aa7.37□□□□□ -1.23
PHGDH-222ENST00000641587 PQLC2Q6ZP29 291 aa7.37□□□□□ -1.23
PHGDH-222ENST00000641587 RBPMS2Q6ZRY4 209 aaKnown RBP7.37□□□□□ -1.23
PHGDH-222ENST00000641587 BPIFA4PQ86YQ2 179 aa7.37□□□□□ -1.23
PHGDH-222ENST00000641587 STXBP6Q8NFX7 210 aa7.37□□□□□ -1.23
PHGDH-222ENST00000641587 MBD3L1Q8WWY6 194 aa7.37□□□□□ -1.23
PHGDH-222ENST00000641587 MARC2Q969Z3 335 aa7.37□□□□□ -1.23
PHGDH-222ENST00000641587 GPR82Q96P67 336 aa7.37□□□□□ -1.23
PHGDH-222ENST00000641587 RHPN1-AS1Q9BWJ2 59 aa7.37□□□□□ -1.23
PHGDH-222ENST00000641587 OR51M1Q9H341 326 aa7.37□□□□□ -1.23
PHGDH-222ENST00000641587 SMPXQ9UHP9 88 aa7.37□□□□□ -1.23
PHGDH-222ENST00000641587 CHEK1O14757 476 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms