RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 APOHP02749 345 aaPredicted RBP10.02□□□□□ -0.81
PHGDH-221ENST00000641573 FAM106AQ4KMX7 169 aa10.02□□□□□ -0.81
PHGDH-221ENST00000641573 TCTEX1D4Q5JR98 221 aa10.02□□□□□ -0.81
PHGDH-221ENST00000641573 C1orf194Q5T5A4 169 aa10.02□□□□□ -0.81
PHGDH-221ENST00000641573 GPHB5Q86YW7 130 aa10.02□□□□□ -0.81
PHGDH-221ENST00000641573 LINC01006Q8NI28 216 aa10.02□□□□□ -0.81
PHGDH-221ENST00000641573 WIPF2Q8TF74 440 aaPredicted RBP10.02□□□□□ -0.81
PHGDH-221ENST00000641573 C17orf77Q96MU5 243 aa10.02□□□□□ -0.81
PHGDH-221ENST00000641573 Q9H3A6 140 aa10.02□□□□□ -0.81
PHGDH-221ENST00000641573 NAT8Q9UHE5 227 aa10.02□□□□□ -0.81
PHGDH-221ENST00000641573 IGHV4OR15-8A0A075B7B6 117 aa10.01□□□□□ -0.81
PHGDH-221ENST00000641573 IGHV3OR16-13A0A075B7E8 117 aa10.01□□□□□ -0.81
PHGDH-221ENST00000641573 A0A087WW49 117 aa10.01□□□□□ -0.81
PHGDH-221ENST00000641573 IGHV3-74A0A0B4J1X5 117 aa10.01□□□□□ -0.81
PHGDH-221ENST00000641573 SLC25A5P05141 298 aaKnown RBP10.01□□□□□ -0.81
PHGDH-221ENST00000641573 ATF4P18848 351 aaPredicted RBP10.01□□□□□ -0.81
PHGDH-221ENST00000641573 CDX1P47902 265 aaPredicted RBP10.01□□□□□ -0.81
PHGDH-221ENST00000641573 TMEM241Q24JQ0 296 aa10.01□□□□□ -0.81
PHGDH-221ENST00000641573 RPEL1Q2QD12 228 aa10.01□□□□□ -0.81
PHGDH-221ENST00000641573 C18orf65Q6ZTR6 163 aa10.01□□□□□ -0.81
PHGDH-221ENST00000641573 GPR82Q96P67 336 aa10.01□□□□□ -0.81
PHGDH-221ENST00000641573 DERL1Q9BUN8 251 aa10.01□□□□□ -0.81
PHGDH-221ENST00000641573 SDF2L1Q9HCN8 221 aa10.01□□□□□ -0.81
PHGDH-221ENST00000641573 OTORQ9NRC9 128 aa10.01□□□□□ -0.81
PHGDH-221ENST00000641573 SMAD5-AS1Q9Y6J3 95 aa10.01□□□□□ -0.81
PHGDH-221ENST00000641573 PRKDCP78527 4128 aaKnown RBP10□□□□□ -0.81
PHGDH-221ENST00000641573 GALR1P47211 349 aa10□□□□□ -0.81
PHGDH-221ENST00000641573 KHDC1LQ5JSQ8 128 aa10□□□□□ -0.81
PHGDH-221ENST00000641573 C16orf54Q6UWD8 224 aa10□□□□□ -0.81
PHGDH-221ENST00000641573 TCEAL7Q9BRU2 100 aa10□□□□□ -0.81
PHGDH-221ENST00000641573 ZNF785A8K8V0 405 aa9.99□□□□□ -0.81
PHGDH-221ENST00000641573 K7EMT4 169 aa9.99□□□□□ -0.81
PHGDH-221ENST00000641573 SLC17A3O00476 420 aa9.99□□□□□ -0.81
PHGDH-221ENST00000641573 PEX7O00628 323 aa9.99□□□□□ -0.81
PHGDH-221ENST00000641573 AKR1C3P42330 323 aa9.99□□□□□ -0.81
PHGDH-221ENST00000641573 GNG5P63218 68 aa9.99□□□□□ -0.81
PHGDH-221ENST00000641573 PDE6HQ13956 83 aa9.99□□□□□ -0.81
PHGDH-221ENST00000641573 TM4SF20Q53R12 229 aa9.99□□□□□ -0.81
PHGDH-221ENST00000641573 SIGLEC15Q6ZMC9 328 aa9.99□□□□□ -0.81
PHGDH-221ENST00000641573 LYPD1Q8N2G4 141 aa9.99□□□□□ -0.81
PHGDH-221ENST00000641573 EXOC3-AS1Q8N2X6 119 aa9.99□□□□□ -0.81
PHGDH-221ENST00000641573 C5orf17Q8NAS9 161 aa9.99□□□□□ -0.81
PHGDH-221ENST00000641573 C2CD4CQ8TF44 421 aa9.99□□□□□ -0.81
PHGDH-221ENST00000641573 C4orf3Q8WVX3 66 aa9.99□□□□□ -0.81
PHGDH-221ENST00000641573 GRAMD2BQ96HH9 432 aa9.99□□□□□ -0.81
PHGDH-221ENST00000641573 EPDR1Q9UM22 224 aa9.99□□□□□ -0.81
PHGDH-221ENST00000641573 UFC1Q9Y3C8 167 aa9.99□□□□□ -0.81
PHGDH-221ENST00000641573 A0A087X0K7 114 aa9.98□□□□□ -0.81
PHGDH-221ENST00000641573 IGHV7-4-1A0A0J9YVY3 117 aa9.98□□□□□ -0.81
PHGDH-221ENST00000641573 A0A1W2PS18 150 aa9.98□□□□□ -0.81
PHGDH-221ENST00000641573 C7orf77A4D0Y5 90 aa9.98□□□□□ -0.81
PHGDH-221ENST00000641573 HELTA6NFD8 242 aa9.98□□□□□ -0.81
PHGDH-221ENST00000641573 CD28P10747 220 aa9.98□□□□□ -0.81
PHGDH-221ENST00000641573 RPL35P42766 123 aaKnown RBP9.98□□□□□ -0.81
PHGDH-221ENST00000641573 RPL23P62829 140 aaKnown RBP9.98□□□□□ -0.81
PHGDH-221ENST00000641573 PSG9Q00887 426 aa9.98□□□□□ -0.81
PHGDH-221ENST00000641573 PNRC1Q12796 327 aaPredicted RBP9.98□□□□□ -0.81
PHGDH-221ENST00000641573 RHEBQ15382 184 aa9.98□□□□□ -0.81
PHGDH-221ENST00000641573 REC114Q7Z4M0 266 aa9.98□□□□□ -0.81
PHGDH-221ENST00000641573 GLMPQ8WWB7 406 aa9.98□□□□□ -0.81
PHGDH-221ENST00000641573 WFDC12Q8WWY7 111 aa9.98□□□□□ -0.81
PHGDH-221ENST00000641573 HIST1H2BAQ96A08 127 aa9.98□□□□□ -0.81
PHGDH-221ENST00000641573 RPS10P5Q9NQ39 176 aa9.98□□□□□ -0.81
PHGDH-221ENST00000641573 DAZ1Q9NQZ3 744 aaKnown RBP9.98□□□□□ -0.81
PHGDH-221ENST00000641573 RPH3ALQ9UNE2 315 aa9.98□□□□□ -0.81
PHGDH-221ENST00000641573 LINC01619G3V211 115 aa9.97□□□□□ -0.81
PHGDH-221ENST00000641573 ZNF253O75346 499 aa9.97□□□□□ -0.81
PHGDH-221ENST00000641573 HOXD3P31249 432 aaPredicted RBP9.97□□□□□ -0.81
PHGDH-221ENST00000641573 CNN1P51911 297 aaKnown RBP9.97□□□□□ -0.81
PHGDH-221ENST00000641573 BTN1A1Q13410 526 aa9.97□□□□□ -0.81
PHGDH-221ENST00000641573 ADIRFQ15847 76 aa9.97□□□□□ -0.81
PHGDH-221ENST00000641573 DEFB136Q30KP8 78 aa9.97□□□□□ -0.81
PHGDH-221ENST00000641573 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.97□□□□□ -0.81
PHGDH-221ENST00000641573 C11orf44Q8N8P7 122 aa9.97□□□□□ -0.81
PHGDH-221ENST00000641573 KLHL30-AS1Q8NEE0 82 aa9.97□□□□□ -0.81
PHGDH-221ENST00000641573 OR1N2Q8NGR9 330 aa9.97□□□□□ -0.81
PHGDH-221ENST00000641573 CMTM2Q8TAZ6 248 aa9.97□□□□□ -0.81
PHGDH-221ENST00000641573 DPF1Q92782 380 aa9.97□□□□□ -0.81
PHGDH-221ENST00000641573 SMPXQ9UHP9 88 aa9.97□□□□□ -0.81
PHGDH-221ENST00000641573 RNF114Q9Y508 228 aa9.97□□□□□ -0.81
PHGDH-221ENST00000641573 B4DEV8 164 aa9.96□□□□□ -0.82
PHGDH-221ENST00000641573 C9JCJ5 164 aa9.96□□□□□ -0.82
PHGDH-221ENST00000641573 LGALS9O00182 355 aa9.96□□□□□ -0.82
PHGDH-221ENST00000641573 CHEK1O14757 476 aa9.96□□□□□ -0.82
PHGDH-221ENST00000641573 TCRAP04437 139 aa9.96□□□□□ -0.82
PHGDH-221ENST00000641573 SYNJ2BPP57105 145 aa9.96□□□□□ -0.82
PHGDH-221ENST00000641573 TAS2R60P59551 318 aa9.96□□□□□ -0.82
PHGDH-221ENST00000641573 C1QL4Q86Z23 238 aa9.96□□□□□ -0.82
PHGDH-221ENST00000641573 OR11H1Q8NG94 326 aa9.96□□□□□ -0.82
PHGDH-221ENST00000641573 LINC00479Q96M42 142 aa9.96□□□□□ -0.82
PHGDH-221ENST00000641573 ATG101Q9BSB4 218 aa9.96□□□□□ -0.82
PHGDH-221ENST00000641573 RHPN1-AS1Q9BWJ2 59 aa9.96□□□□□ -0.82
PHGDH-221ENST00000641573 AAMDCQ9H7C9 122 aa9.96□□□□□ -0.82
PHGDH-221ENST00000641573 WNK1Q9H4A3 2382 aa9.96□□□□□ -0.82
PHGDH-221ENST00000641573 TRBV20OR9-2A0A075B6H5 130 aa9.95□□□□□ -0.82
PHGDH-221ENST00000641573 TRAV34A0A0B4J273 112 aa9.95□□□□□ -0.82
PHGDH-221ENST00000641573 TMEM213A2RRL7 107 aa9.95□□□□□ -0.82
PHGDH-221ENST00000641573 PGPEP1LA6NFU8 196 aa9.95□□□□□ -0.82
PHGDH-221ENST00000641573 A8MWP6 167 aa9.95□□□□□ -0.82
PHGDH-221ENST00000641573 DNASE2O00115 360 aaPredicted RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms