RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 STAG3L3P0CL85 134 aa9.79□□□□□ -0.84
PHGDH-218ENST00000641491 PYYP10082 97 aa9.79□□□□□ -0.84
PHGDH-218ENST00000641491 CSN1S1P47710 185 aa9.79□□□□□ -0.84
PHGDH-218ENST00000641491 FGF8P55075 233 aaPredicted RBP9.79□□□□□ -0.84
PHGDH-218ENST00000641491 PDE6HQ13956 83 aa9.79□□□□□ -0.84
PHGDH-218ENST00000641491 ZNF680Q8NEM1 530 aa9.79□□□□□ -0.84
PHGDH-218ENST00000641491 SAT2Q96F10 170 aaPredicted RBP9.79□□□□□ -0.84
PHGDH-218ENST00000641491 LINC00052Q96N35 136 aa9.79□□□□□ -0.84
PHGDH-218ENST00000641491 HRH4Q9H3N8 390 aa9.79□□□□□ -0.84
PHGDH-218ENST00000641491 A0A087X0K7 114 aa9.78□□□□□ -0.84
PHGDH-218ENST00000641491 NBEAP1P0C6P0 100 aa9.78□□□□□ -0.84
PHGDH-218ENST00000641491 GP9P14770 177 aa9.78□□□□□ -0.84
PHGDH-218ENST00000641491 GCHFRP30047 84 aa9.78□□□□□ -0.84
PHGDH-218ENST00000641491 PSMB3P49720 205 aa9.78□□□□□ -0.84
PHGDH-218ENST00000641491 FHITP49789 147 aa9.78□□□□□ -0.84
PHGDH-218ENST00000641491 ZNF256Q9Y2P7 627 aaPredicted RBP9.78□□□□□ -0.84
PHGDH-218ENST00000641491 NOTCH1P46531 2555 aa9.77□□□□□ -0.84
PHGDH-218ENST00000641491 OR11H12B2RN74 326 aa9.77□□□□□ -0.85
PHGDH-218ENST00000641491 ISLRO14498 428 aa9.77□□□□□ -0.85
PHGDH-218ENST00000641491 CD81P60033 236 aa9.77□□□□□ -0.85
PHGDH-218ENST00000641491 MORN5Q5VZ52 161 aa9.77□□□□□ -0.85
PHGDH-218ENST00000641491 ZNF738Q8NE65 137 aa9.77□□□□□ -0.85
PHGDH-218ENST00000641491 MANBALQ9NQG1 85 aa9.77□□□□□ -0.85
PHGDH-218ENST00000641491 TRBV19A0A075B6N1 114 aa9.76□□□□□ -0.85
PHGDH-218ENST00000641491 H3BTX0 84 aa9.76□□□□□ -0.85
PHGDH-218ENST00000641491 K7EQM0 130 aa9.76□□□□□ -0.85
PHGDH-218ENST00000641491 ZNF253O75346 499 aa9.76□□□□□ -0.85
PHGDH-218ENST00000641491 EIF3GO75821 320 aaKnown RBP eCLIP9.76□□□□□ -0.85
PHGDH-218ENST00000641491 SNRPCP09234 159 aaKnown RBP9.76□□□□□ -0.85
PHGDH-218ENST00000641491 TAGLN2P37802 199 aaKnown RBP9.76□□□□□ -0.85
PHGDH-218ENST00000641491 OXLD1Q5BKU9 147 aa9.76□□□□□ -0.85
PHGDH-218ENST00000641491 PSMG4Q5JS54 123 aa9.76□□□□□ -0.85
PHGDH-218ENST00000641491 CST9LP1Q5W188 147 aa9.76□□□□□ -0.85
PHGDH-218ENST00000641491 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.76□□□□□ -0.85
PHGDH-218ENST00000641491 ADAMTSL5Q6ZMM2 481 aa9.76□□□□□ -0.85
PHGDH-218ENST00000641491 MBD3L1Q8WWY6 194 aa9.76□□□□□ -0.85
PHGDH-218ENST00000641491 ZNF414Q96IQ9 312 aa9.76□□□□□ -0.85
PHGDH-218ENST00000641491 NKX6-2Q9C056 277 aaPredicted RBP9.76□□□□□ -0.85
PHGDH-218ENST00000641491 PPP1R14DQ9NXH3 145 aa9.76□□□□□ -0.85
PHGDH-218ENST00000641491 GNG13Q9P2W3 67 aa9.76□□□□□ -0.85
PHGDH-218ENST00000641491 PRELID1Q9Y255 219 aa9.76□□□□□ -0.85
PHGDH-218ENST00000641491 ZNF688P0C7X2 276 aa9.75□□□□□ -0.85
PHGDH-218ENST00000641491 IGLC2P0DOY2 106 aa9.75□□□□□ -0.85
PHGDH-218ENST00000641491 UBE2G2P60604 165 aa9.75□□□□□ -0.85
PHGDH-218ENST00000641491 RANP62826 216 aaKnown RBP9.75□□□□□ -0.85
PHGDH-218ENST00000641491 ZNF726P1Q15940 193 aa9.75□□□□□ -0.85
PHGDH-218ENST00000641491 FAM90A2PQ658T7 463 aa9.75□□□□□ -0.85
PHGDH-218ENST00000641491 EBLN2Q6P2I7 272 aa9.75□□□□□ -0.85
PHGDH-218ENST00000641491 LYPD1Q8N2G4 141 aa9.75□□□□□ -0.85
PHGDH-218ENST00000641491 FXYD5Q96DB9 178 aa9.75□□□□□ -0.85
PHGDH-218ENST00000641491 FAM167A-AS1Q96KT0 104 aa9.75□□□□□ -0.85
PHGDH-218ENST00000641491 RPH3ALQ9UNE2 315 aa9.75□□□□□ -0.85
PHGDH-218ENST00000641491 WNK1Q9H4A3 2382 aa9.74□□□□□ -0.85
PHGDH-218ENST00000641491 F6UZH7 168 aa9.74□□□□□ -0.85
PHGDH-218ENST00000641491 RXFP4Q8TDU9 374 aa9.74□□□□□ -0.85
PHGDH-218ENST00000641491 Q9H3A6 140 aa9.74□□□□□ -0.85
PHGDH-218ENST00000641491 TUBA4BQ9H853 241 aa9.74□□□□□ -0.85
PHGDH-218ENST00000641491 OTORQ9NRC9 128 aa9.74□□□□□ -0.85
PHGDH-218ENST00000641491 ZNF586Q9NXT0 402 aa9.74□□□□□ -0.85
PHGDH-218ENST00000641491 TRAV1-1A0A0B4J248 108 aa9.73□□□□□ -0.85
PHGDH-218ENST00000641491 IZUMO1RA6ND01 250 aa9.73□□□□□ -0.85
PHGDH-218ENST00000641491 G3V4G9 280 aa9.73□□□□□ -0.85
PHGDH-218ENST00000641491 H3BQ15 152 aa9.73□□□□□ -0.85
PHGDH-218ENST00000641491 K7EQG2 157 aa9.73□□□□□ -0.85
PHGDH-218ENST00000641491 SLC25A5P05141 298 aaKnown RBP9.73□□□□□ -0.85
PHGDH-218ENST00000641491 ICAM4Q14773 271 aa9.73□□□□□ -0.85
PHGDH-218ENST00000641491 SSX7Q7RTT5 188 aa9.73□□□□□ -0.85
PHGDH-218ENST00000641491 OR10J6PQ8NGY7 276 aa9.73□□□□□ -0.85
PHGDH-218ENST00000641491 SMAD5-AS1Q9Y6J3 95 aa9.73□□□□□ -0.85
PHGDH-218ENST00000641491 ARL2-SNX15V9GYD0 113 aa9.73□□□□□ -0.85
PHGDH-218ENST00000641491 A0A1W2PRE2 83 aa9.72□□□□□ -0.85
PHGDH-218ENST00000641491 PGPA6NDG6 321 aa9.72□□□□□ -0.85
PHGDH-218ENST00000641491 MRPS12O15235 138 aaKnown RBP9.72□□□□□ -0.85
PHGDH-218ENST00000641491 DEFB131AP59861 70 aa9.72□□□□□ -0.85
PHGDH-218ENST00000641491 STHQ8IWL8 128 aa9.72□□□□□ -0.85
PHGDH-218ENST00000641491 DCANP1Q8TF63 244 aa9.72□□□□□ -0.85
PHGDH-218ENST00000641491 MRPL53Q96EL3 112 aaKnown RBP9.72□□□□□ -0.85
PHGDH-218ENST00000641491 TXNDC17Q9BRA2 123 aa9.72□□□□□ -0.85
PHGDH-218ENST00000641491 EIF5A2Q9GZV4 153 aaKnown RBP9.72□□□□□ -0.85
PHGDH-218ENST00000641491 TMPRSS5Q9H3S3 457 aa9.72□□□□□ -0.85
PHGDH-218ENST00000641491 ZNF331Q9NQX6 463 aaPredicted RBP9.72□□□□□ -0.85
PHGDH-218ENST00000641491 C11orf94C9JXX5 98 aa9.71□□□□□ -0.86
PHGDH-218ENST00000641491 SLC17A3O00476 420 aa9.71□□□□□ -0.86
PHGDH-218ENST00000641491 PAGE4O60829 102 aa9.71□□□□□ -0.86
PHGDH-218ENST00000641491 PSG3Q16557 428 aa9.71□□□□□ -0.86
PHGDH-218ENST00000641491 SAMD5Q5TGI4 173 aa9.71□□□□□ -0.86
PHGDH-218ENST00000641491 EXOC3-AS1Q8N2X6 119 aa9.71□□□□□ -0.86
PHGDH-218ENST00000641491 RNF182Q8N6D2 247 aa9.71□□□□□ -0.86
PHGDH-218ENST00000641491 RPUSD4Q96CM3 377 aaKnown RBP9.71□□□□□ -0.86
PHGDH-218ENST00000641491 C17orf77Q96MU5 243 aa9.71□□□□□ -0.86
PHGDH-218ENST00000641491 PRR25Q96S07 402 aa9.71□□□□□ -0.86
PHGDH-218ENST00000641491 TCEAL7Q9BRU2 100 aa9.71□□□□□ -0.86
PHGDH-218ENST00000641491 PRKDCP78527 4128 aaKnown RBP9.7□□□□□ -0.86
PHGDH-218ENST00000641491 SERTM2A0A1B0GWG4 89 aa9.7□□□□□ -0.86
PHGDH-218ENST00000641491 DUSP14O95147 198 aaKnown RBP9.7□□□□□ -0.86
PHGDH-218ENST00000641491 BCL2P10415 239 aa9.7□□□□□ -0.86
PHGDH-218ENST00000641491 SUMO1P63165 101 aaKnown RBP9.7□□□□□ -0.86
PHGDH-218ENST00000641491 HIST1H1AQ02539 215 aaPredicted RBP9.7□□□□□ -0.86
PHGDH-218ENST00000641491 HAGHQ16775 308 aa9.7□□□□□ -0.86
PHGDH-218ENST00000641491 TMEM78Q5T7P6 136 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms