RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 TMEM252Q8N6L7 170 aa12.03□□□□□ -0.48
CACNA1A-259ENST00000638114 WDR83OSQ9Y284 106 aa12.03□□□□□ -0.48
CACNA1A-259ENST00000638114 M0R2Z0 102 aa12.02□□□□□ -0.49
CACNA1A-259ENST00000638114 MRPS12O15235 138 aaKnown RBP12.02□□□□□ -0.49
CACNA1A-259ENST00000638114 SIX6O95475 246 aa12.02□□□□□ -0.49
CACNA1A-259ENST00000638114 HBE1P02100 147 aa12.02□□□□□ -0.49
CACNA1A-259ENST00000638114 AMBPP02760 352 aa12.02□□□□□ -0.49
CACNA1A-259ENST00000638114 SNRPCP09234 159 aaKnown RBP12.02□□□□□ -0.49
CACNA1A-259ENST00000638114 SPART-AS1P0CW21 52 aa12.02□□□□□ -0.49
CACNA1A-259ENST00000638114 S100A11P31949 105 aa12.02□□□□□ -0.49
CACNA1A-259ENST00000638114 BAXQ07812 192 aa12.02□□□□□ -0.49
CACNA1A-259ENST00000638114 PSG3Q16557 428 aa12.02□□□□□ -0.49
CACNA1A-259ENST00000638114 SPINK13Q1W4C9 94 aa12.02□□□□□ -0.49
CACNA1A-259ENST00000638114 MIC13Q5XKP0 118 aa12.02□□□□□ -0.49
CACNA1A-259ENST00000638114 Q6ZRG5 221 aa12.02□□□□□ -0.49
CACNA1A-259ENST00000638114 BPIFA4PQ86YQ2 179 aa12.02□□□□□ -0.49
CACNA1A-259ENST00000638114 RPP25LQ8N5L8 163 aaKnown RBP12.02□□□□□ -0.49
CACNA1A-259ENST00000638114 OR11H7Q8NGC8 314 aa12.02□□□□□ -0.49
CACNA1A-259ENST00000638114 TMEM37Q8WXS4 190 aa12.02□□□□□ -0.49
CACNA1A-259ENST00000638114 IGF2BP2-AS1Q96M15 143 aa12.02□□□□□ -0.49
CACNA1A-259ENST00000638114 TMEM208Q9BTX3 173 aa12.02□□□□□ -0.49
CACNA1A-259ENST00000638114 APLNQ9ULZ1 77 aa12.02□□□□□ -0.49
CACNA1A-259ENST00000638114 DEFB131BA0A096LNP1 70 aa12.01□□□□□ -0.49
CACNA1A-259ENST00000638114 HIST1H1AQ02539 215 aaPredicted RBP12.01□□□□□ -0.49
CACNA1A-259ENST00000638114 OPCMLQ14982 345 aa12.01□□□□□ -0.49
CACNA1A-259ENST00000638114 VWC2Q2TAL6 325 aa12.01□□□□□ -0.49
CACNA1A-259ENST00000638114 MORN5Q5VZ52 161 aa12.01□□□□□ -0.49
CACNA1A-259ENST00000638114 LCN15Q6UWW0 184 aa12.01□□□□□ -0.49
CACNA1A-259ENST00000638114 OR8A1Q8NGG7 326 aa12.01□□□□□ -0.49
CACNA1A-259ENST00000638114 KMT2AQ03164 3969 aa12.01□□□□□ -0.49
CACNA1A-259ENST00000638114 IGHV4-4A0A075B6R2 117 aa12□□□□□ -0.49
CACNA1A-259ENST00000638114 LOC102723971A0A1B0GUV8 181 aa12□□□□□ -0.49
CACNA1A-259ENST00000638114 INMT-MINDY4F8WBC2 141 aa12□□□□□ -0.49
CACNA1A-259ENST00000638114 PRAF2O60831 178 aa12□□□□□ -0.49
CACNA1A-259ENST00000638114 INSP01308 110 aa12□□□□□ -0.49
CACNA1A-259ENST00000638114 PRB4P10163 310 aaPredicted RBP12□□□□□ -0.49
CACNA1A-259ENST00000638114 CXCL2P19875 107 aa12□□□□□ -0.49
CACNA1A-259ENST00000638114 RHOBP62745 196 aa12□□□□□ -0.49
CACNA1A-259ENST00000638114 PRR20EP86478 221 aa12□□□□□ -0.49
CACNA1A-259ENST00000638114 PRR20CP86479 221 aa12□□□□□ -0.49
CACNA1A-259ENST00000638114 PRR20DP86480 221 aa12□□□□□ -0.49
CACNA1A-259ENST00000638114 PRR20BP86481 221 aa12□□□□□ -0.49
CACNA1A-259ENST00000638114 PRR20AP86496 221 aa12□□□□□ -0.49
CACNA1A-259ENST00000638114 RRN3P1Q2M238 152 aa12□□□□□ -0.49
CACNA1A-259ENST00000638114 OR1L4Q8NGR5 311 aa12□□□□□ -0.49
CACNA1A-259ENST00000638114 RPUSD4Q96CM3 377 aaKnown RBP12□□□□□ -0.49
CACNA1A-259ENST00000638114 DNAJC4Q9NNZ3 241 aa12□□□□□ -0.49
CACNA1A-259ENST00000638114 PPP1R14DQ9NXH3 145 aa12□□□□□ -0.49
CACNA1A-259ENST00000638114 TEX48A0A1B0GUV7 120 aa11.99□□□□□ -0.49
CACNA1A-259ENST00000638114 H3BTX0 84 aa11.99□□□□□ -0.49
CACNA1A-259ENST00000638114 BOLA2-SMG1P6H3BVE0 249 aa11.99□□□□□ -0.49
CACNA1A-259ENST00000638114 RLN2P04090 185 aa11.99□□□□□ -0.49
CACNA1A-259ENST00000638114 FGF7P21781 194 aa11.99□□□□□ -0.49
CACNA1A-259ENST00000638114 RPL29P47914 159 aaKnown RBP11.99□□□□□ -0.49
CACNA1A-259ENST00000638114 B2MP61769 119 aa11.99□□□□□ -0.49
CACNA1A-259ENST00000638114 ATP6V1FQ16864 119 aa11.99□□□□□ -0.49
CACNA1A-259ENST00000638114 LRRC37A5PQ49AS3 106 aa11.99□□□□□ -0.49
CACNA1A-259ENST00000638114 FAM222AQ5U5X8 452 aa11.99□□□□□ -0.49
CACNA1A-259ENST00000638114 BAP18Q8IXM2 172 aa11.99□□□□□ -0.49
CACNA1A-259ENST00000638114 SLC50A1Q9BRV3 221 aa11.99□□□□□ -0.49
CACNA1A-259ENST00000638114 RNF126Q9BV68 326 aa11.99□□□□□ -0.49
CACNA1A-259ENST00000638114 ZNF331Q9NQX6 463 aaPredicted RBP11.99□□□□□ -0.49
CACNA1A-259ENST00000638114 SLC39A9Q9NUM3 307 aa11.99□□□□□ -0.49
CACNA1A-259ENST00000638114 CRXO43186 299 aaPredicted RBP11.98□□□□□ -0.49
CACNA1A-259ENST00000638114 DEFA1P59665 94 aa11.98□□□□□ -0.49
CACNA1A-259ENST00000638114 DEFA3P59666 94 aa11.98□□□□□ -0.49
CACNA1A-259ENST00000638114 PFDN5Q99471 154 aa11.98□□□□□ -0.49
CACNA1A-259ENST00000638114 NMES1Q9C002 83 aa11.98□□□□□ -0.49
CACNA1A-259ENST00000638114 DKK2Q9UBU2 259 aa11.98□□□□□ -0.49
CACNA1A-259ENST00000638114 YTHDF2Q9Y5A9 579 aaKnown RBP11.98□□□□□ -0.49
CACNA1A-259ENST00000638114 BIRC6Q9NR09 4857 aa11.97□□□□□ -0.49
CACNA1A-259ENST00000638114 TRAV12-2A0A075B6T6 113 aa11.97□□□□□ -0.49
CACNA1A-259ENST00000638114 TRAV5A0A0B4J249 113 aa11.97□□□□□ -0.49
CACNA1A-259ENST00000638114 E5RGE8 158 aa11.97□□□□□ -0.49
CACNA1A-259ENST00000638114 SLC17A3O00476 420 aa11.97□□□□□ -0.49
CACNA1A-259ENST00000638114 IGLC2P0DOY2 106 aa11.97□□□□□ -0.49
CACNA1A-259ENST00000638114 NHLH2Q02577 135 aa11.97□□□□□ -0.49
CACNA1A-259ENST00000638114 NIPSNAP3BQ9BS92 247 aa11.97□□□□□ -0.49
CACNA1A-259ENST00000638114 SLC25A31Q9H0C2 315 aa11.97□□□□□ -0.49
CACNA1A-259ENST00000638114 OR5AC2Q9NZP5 309 aa11.97□□□□□ -0.49
CACNA1A-259ENST00000638114 PXMP4Q9Y6I8 212 aa11.97□□□□□ -0.49
CACNA1A-259ENST00000638114 ZNF705GA8MUZ8 300 aaPredicted RBP11.96□□□□□ -0.49
CACNA1A-259ENST00000638114 H3BQ15 152 aa11.96□□□□□ -0.49
CACNA1A-259ENST00000638114 CYCSP99999 105 aaKnown RBP11.96□□□□□ -0.49
CACNA1A-259ENST00000638114 CHAC2Q8WUX2 184 aa11.96□□□□□ -0.49
CACNA1A-259ENST00000638114 MARVELD1Q9BSK0 173 aa11.96□□□□□ -0.49
CACNA1A-259ENST00000638114 BATF3Q9NR55 127 aa11.96□□□□□ -0.49
CACNA1A-259ENST00000638114 PLA2G2EQ9NZK7 142 aa11.96□□□□□ -0.49
CACNA1A-259ENST00000638114 VPS13DQ5THJ4 4388 aa11.95□□□□□ -0.5
CACNA1A-259ENST00000638114 SSNA1O43805 119 aa11.95□□□□□ -0.5
CACNA1A-259ENST00000638114 MPDU1O75352 247 aa11.95□□□□□ -0.5
CACNA1A-259ENST00000638114 OR5C1Q8NGR4 320 aa11.95□□□□□ -0.5
CACNA1A-259ENST00000638114 THAP6Q8TBB0 222 aa11.95□□□□□ -0.5
CACNA1A-259ENST00000638114 NDUFAF3Q9BU61 184 aa11.95□□□□□ -0.5
CACNA1A-259ENST00000638114 NPCDR1Q9BY65 106 aa11.95□□□□□ -0.5
CACNA1A-259ENST00000638114 H0YIZ8 118 aa11.94□□□□□ -0.5
CACNA1A-259ENST00000638114 PRM2P04554 102 aa11.94□□□□□ -0.5
CACNA1A-259ENST00000638114 HTN3P15516 51 aa11.94□□□□□ -0.5
CACNA1A-259ENST00000638114 CLINT1Q14677 625 aa11.94□□□□□ -0.5
CACNA1A-259ENST00000638114 GUK1Q16774 197 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms