RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 MRPS12O15235 138 aaKnown RBP12.99□□□□□ -0.33
CLN6-220ENST00000637450 TAS2R30P59541 319 aa12.99□□□□□ -0.33
CLN6-220ENST00000637450 RHOBP62745 196 aa12.99□□□□□ -0.33
CLN6-220ENST00000637450 FCN2Q15485 313 aa12.99□□□□□ -0.33
CLN6-220ENST00000637450 C1orf134Q5TEV5 83 aa12.99□□□□□ -0.33
CLN6-220ENST00000637450 TRIQKQ629K1 86 aa12.99□□□□□ -0.33
CLN6-220ENST00000637450 TEPPQ6URK8 271 aa12.99□□□□□ -0.33
CLN6-220ENST00000637450 OR10P1Q8NGE3 313 aa12.99□□□□□ -0.33
CLN6-220ENST00000637450 LRRC20Q8TCA0 184 aa12.99□□□□□ -0.33
CLN6-220ENST00000637450 ARV1Q9H2C2 271 aa12.99□□□□□ -0.33
CLN6-220ENST00000637450 ANXA7P20073 488 aaKnown RBP12.98□□□□□ -0.33
CLN6-220ENST00000637450 TAS2R60P59551 318 aa12.98□□□□□ -0.33
CLN6-220ENST00000637450 IAH1Q2TAA2 248 aaPredicted RBP12.98□□□□□ -0.33
CLN6-220ENST00000637450 C4orf46Q504U0 113 aa12.98□□□□□ -0.33
CLN6-220ENST00000637450 PXDC1Q5TGL8 231 aa12.98□□□□□ -0.33
CLN6-220ENST00000637450 TMEM256Q8N2U0 113 aa12.98□□□□□ -0.33
CLN6-220ENST00000637450 PPP1R14DQ9NXH3 145 aa12.98□□□□□ -0.33
CLN6-220ENST00000637450 MGAT4CQ9UBM8 478 aa12.98□□□□□ -0.33
CLN6-220ENST00000637450 RNF24Q9Y225 148 aa12.98□□□□□ -0.33
CLN6-220ENST00000637450 F5H768 121 aa12.97□□□□□ -0.33
CLN6-220ENST00000637450 ZNF701M0R085 212 aaPredicted RBP12.97□□□□□ -0.33
CLN6-220ENST00000637450 TSC22D2O75157 780 aa12.97□□□□□ -0.33
CLN6-220ENST00000637450 BTCP35070 178 aa12.97□□□□□ -0.33
CLN6-220ENST00000637450 SLC38A11Q08AI6 406 aa12.97□□□□□ -0.33
CLN6-220ENST00000637450 RPUSD4Q96CM3 377 aaKnown RBP12.97□□□□□ -0.33
CLN6-220ENST00000637450 SDHCQ99643 169 aaPredicted RBP12.97□□□□□ -0.33
CLN6-220ENST00000637450 LINC00854A0A1B0GVQ3 168 aa12.96□□□□□ -0.33
CLN6-220ENST00000637450 CBY3A6NI87 242 aa12.96□□□□□ -0.33
CLN6-220ENST00000637450 SCGB1D2O95969 90 aa12.96□□□□□ -0.33
CLN6-220ENST00000637450 PRB4P10163 310 aaPredicted RBP12.96□□□□□ -0.33
CLN6-220ENST00000637450 CXCL2P19875 107 aa12.96□□□□□ -0.33
CLN6-220ENST00000637450 ARL16Q0P5N6 197 aa12.96□□□□□ -0.33
CLN6-220ENST00000637450 ZBTB8BQ8NAP8 495 aaPredicted RBP12.96□□□□□ -0.33
CLN6-220ENST00000637450 ATG101Q9BSB4 218 aa12.96□□□□□ -0.33
CLN6-220ENST00000637450 GGACTQ9BVM4 153 aa12.96□□□□□ -0.33
CLN6-220ENST00000637450 GSKIPQ9P0R6 139 aa12.96□□□□□ -0.33
CLN6-220ENST00000637450 RCL1Q9Y2P8 373 aaKnown RBP12.96□□□□□ -0.33
CLN6-220ENST00000637450 NACAE9PAV3 2078 aa12.95□□□□□ -0.34
CLN6-220ENST00000637450 CENPXA8MT69 81 aa12.95□□□□□ -0.34
CLN6-220ENST00000637450 GOSR2O14653 212 aa12.95□□□□□ -0.34
CLN6-220ENST00000637450 AGPAT2O15120 278 aa12.95□□□□□ -0.34
CLN6-220ENST00000637450 ATP5G1P05496 136 aa12.95□□□□□ -0.34
CLN6-220ENST00000637450 CDKN1BP46527 198 aa12.95□□□□□ -0.34
CLN6-220ENST00000637450 ATP5G3P48201 142 aa12.95□□□□□ -0.34
CLN6-220ENST00000637450 LINC00305Q7Z4B0 112 aa12.95□□□□□ -0.34
CLN6-220ENST00000637450 MITD1Q8WV92 249 aa12.95□□□□□ -0.34
CLN6-220ENST00000637450 C16orf74Q96GX8 76 aa12.95□□□□□ -0.34
CLN6-220ENST00000637450 ZNF331Q9NQX6 463 aaPredicted RBP12.95□□□□□ -0.34
CLN6-220ENST00000637450 C7orf66A4D0T2 115 aa12.94□□□□□ -0.34
CLN6-220ENST00000637450 NUDT3O95989 172 aa12.94□□□□□ -0.34
CLN6-220ENST00000637450 MBPP02686 304 aaPredicted RBP12.94□□□□□ -0.34
CLN6-220ENST00000637450 HTN1P15515 57 aa12.94□□□□□ -0.34
CLN6-220ENST00000637450 LCN15Q6UWW0 184 aa12.94□□□□□ -0.34
CLN6-220ENST00000637450 ZNF493Q6ZR52 646 aa12.94□□□□□ -0.34
CLN6-220ENST00000637450 ZNF546Q86UE3 836 aa12.94□□□□□ -0.34
CLN6-220ENST00000637450 ZNRF2Q8NHG8 242 aa12.94□□□□□ -0.34
CLN6-220ENST00000637450 TIMM8BQ9Y5J9 83 aaPredicted RBP12.94□□□□□ -0.34
CLN6-220ENST00000637450 LRP1BQ9NZR2 4599 aa12.93□□□□□ -0.34
CLN6-220ENST00000637450 SNRPCP09234 159 aaKnown RBP12.93□□□□□ -0.34
CLN6-220ENST00000637450 CNPY1Q3B7I2 92 aa12.93□□□□□ -0.34
CLN6-220ENST00000637450 BPIFA4PQ86YQ2 179 aa12.93□□□□□ -0.34
CLN6-220ENST00000637450 TMEM37Q8WXS4 190 aa12.93□□□□□ -0.34
CLN6-220ENST00000637450 SLC50A1Q9BRV3 221 aa12.93□□□□□ -0.34
CLN6-220ENST00000637450 H7BYZ3 331 aa12.92□□□□□ -0.34
CLN6-220ENST00000637450 ZNF575Q86XF7 245 aa12.92□□□□□ -0.34
CLN6-220ENST00000637450 RNASE8Q8TDE3 154 aaKnown RBP12.92□□□□□ -0.34
CLN6-220ENST00000637450 MGST2Q99735 147 aa12.92□□□□□ -0.34
CLN6-220ENST00000637450 NOP10Q9NPE3 64 aaKnown RBP12.92□□□□□ -0.34
CLN6-220ENST00000637450 HSPG2P98160 4391 aa12.92□□□□□ -0.34
CLN6-220ENST00000637450 NBDYA0A0U1RRE5 68 aa12.91□□□□□ -0.34
CLN6-220ENST00000637450 PRAC2D3DTV9 90 aa12.91□□□□□ -0.34
CLN6-220ENST00000637450 COX7A2P2O60397 106 aa12.91□□□□□ -0.34
CLN6-220ENST00000637450 IL7P13232 177 aa12.91□□□□□ -0.34
CLN6-220ENST00000637450 CCL18P55774 89 aa12.91□□□□□ -0.34
CLN6-220ENST00000637450 KIR3DS1Q14943 382 aa12.91□□□□□ -0.34
CLN6-220ENST00000637450 MORN5Q5VZ52 161 aa12.91□□□□□ -0.34
CLN6-220ENST00000637450 TMEM263Q8WUH6 116 aaKnown RBP12.91□□□□□ -0.34
CLN6-220ENST00000637450 C20orf144Q9BQM9 153 aa12.91□□□□□ -0.34
CLN6-220ENST00000637450 MUC4Q99102 2169 aa12.91□□□□□ -0.34
CLN6-220ENST00000637450 SLC17A3O00476 420 aa12.9□□□□□ -0.34
CLN6-220ENST00000637450 OPCMLQ14982 345 aa12.9□□□□□ -0.34
CLN6-220ENST00000637450 C10orf113Q5VZT2 155 aa12.9□□□□□ -0.34
CLN6-220ENST00000637450 RNF141Q8WVD5 230 aa12.9□□□□□ -0.34
CLN6-220ENST00000637450 LINC00588Q9Y4M8 146 aa12.9□□□□□ -0.34
CLN6-220ENST00000637450 H3BQ15 152 aa12.89□□□□□ -0.35
CLN6-220ENST00000637450 H3BTX0 84 aa12.89□□□□□ -0.35
CLN6-220ENST00000637450 IGLC2P0DOY2 106 aa12.89□□□□□ -0.35
CLN6-220ENST00000637450 TNP2Q05952 138 aa12.89□□□□□ -0.35
CLN6-220ENST00000637450 OR10J6PQ8NGY7 276 aa12.89□□□□□ -0.35
CLN6-220ENST00000637450 SAT2Q96F10 170 aaPredicted RBP12.89□□□□□ -0.35
CLN6-220ENST00000637450 PARD6GQ9BYG4 376 aaPredicted RBP12.89□□□□□ -0.35
CLN6-220ENST00000637450 DNAJC4Q9NNZ3 241 aa12.89□□□□□ -0.35
CLN6-220ENST00000637450 PXMP4Q9Y6I8 212 aa12.89□□□□□ -0.35
CLN6-220ENST00000637450 L7N2F9 121 aa12.88□□□□□ -0.35
CLN6-220ENST00000637450 CCSO14618 274 aa12.88□□□□□ -0.35
CLN6-220ENST00000637450 PLA2G10O15496 165 aa12.88□□□□□ -0.35
CLN6-220ENST00000637450 CAMLGP49069 296 aa12.88□□□□□ -0.35
CLN6-220ENST00000637450 VAMP2P63027 116 aa12.88□□□□□ -0.35
CLN6-220ENST00000637450 GFI1BQ5VTD9 330 aa12.88□□□□□ -0.35
CLN6-220ENST00000637450 C6orf223Q8N319 242 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms