RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 CYCSP99999 105 aaKnown RBP2.16□□□□□ -2.06
VIM-210ENST00000637053 WFDC2Q14508 124 aa2.16□□□□□ -2.06
VIM-210ENST00000637053 SS18Q15532 418 aa2.16□□□□□ -2.06
VIM-210ENST00000637053 UBE2SQ16763 222 aa2.16□□□□□ -2.06
VIM-210ENST00000637053 ETDBQ3ZM63 59 aa2.16□□□□□ -2.06
VIM-210ENST00000637053 MPV17L2Q567V2 206 aa2.16□□□□□ -2.06
VIM-210ENST00000637053 CASC10Q5T4H9 136 aa2.16□□□□□ -2.06
VIM-210ENST00000637053 FAM53AQ6NSI3 398 aaPredicted RBP2.16□□□□□ -2.06
VIM-210ENST00000637053 METTL27Q8N6F8 245 aaPredicted RBP2.16□□□□□ -2.06
VIM-210ENST00000637053 NUP37Q8NFH4 326 aa2.16□□□□□ -2.06
VIM-210ENST00000637053 C18orf32Q8TCD1 76 aa2.16□□□□□ -2.06
VIM-210ENST00000637053 FGF13Q92913 245 aa2.16□□□□□ -2.06
VIM-210ENST00000637053 RMI2Q96E14 147 aa2.16□□□□□ -2.06
VIM-210ENST00000637053 Q9H3A6 140 aa2.16□□□□□ -2.06
VIM-210ENST00000637053 OSTCQ9NRP0 149 aa2.16□□□□□ -2.06
VIM-210ENST00000637053 ZNF222Q9UK12 451 aa2.16□□□□□ -2.06
VIM-210ENST00000637053 CELA1Q9UNI1 258 aa2.16□□□□□ -2.06
VIM-210ENST00000637053 CSAG2Q9Y5P2 127 aa2.16□□□□□ -2.06
VIM-210ENST00000637053 MARF1Q9Y4F3 1742 aaKnown RBP2.16□□□□□ -2.06
VIM-210ENST00000637053 LRRC7Q96NW7 1537 aa2.16□□□□□ -2.06
VIM-210ENST00000637053 DLC1Q96QB1 1528 aa2.16□□□□□ -2.06
VIM-210ENST00000637053 BLMP54132 1417 aaPredicted RBP2.16□□□□□ -2.06
VIM-210ENST00000637053 KIF1AQ12756 1690 aa2.15□□□□□ -2.06
VIM-210ENST00000637053 MYH7BA7E2Y1 1941 aa2.15□□□□□ -2.06
VIM-210ENST00000637053 PTPRFP10586 1907 aa2.15□□□□□ -2.06
VIM-210ENST00000637053 MYH1P12882 1939 aa2.15□□□□□ -2.06
VIM-210ENST00000637053 KIF13AQ9H1H9 1805 aa2.15□□□□□ -2.06
VIM-210ENST00000637053 IGLV4-3A0A075B6K6 122 aa2.15□□□□□ -2.07
VIM-210ENST00000637053 TRBV24-1A0A075B6N3 115 aa2.15□□□□□ -2.07
VIM-210ENST00000637053 IGHV3OR15-7A0A075B7D8 119 aa2.15□□□□□ -2.07
VIM-210ENST00000637053 A0A087WW49 117 aa2.15□□□□□ -2.07
VIM-210ENST00000637053 IGKV1-6A0A0C4DH72 117 aa2.15□□□□□ -2.07
VIM-210ENST00000637053 KLF18A0A0U1RQI7 1052 aa2.15□□□□□ -2.07
VIM-210ENST00000637053 hADV29S1A0JD25 119 aa2.15□□□□□ -2.07
VIM-210ENST00000637053 ZNF736B4DX44 427 aaPredicted RBP2.15□□□□□ -2.07
VIM-210ENST00000637053 SYS1-DBNDD2H3BUS1 97 aa2.15□□□□□ -2.07
VIM-210ENST00000637053 H3BUT2 72 aa2.15□□□□□ -2.07
VIM-210ENST00000637053 C19orf84I3L1E1 186 aa2.15□□□□□ -2.07
VIM-210ENST00000637053 BMPR1BO00238 502 aa2.15□□□□□ -2.07
VIM-210ENST00000637053 CREBL2O60519 120 aaPredicted RBP2.15□□□□□ -2.07
VIM-210ENST00000637053 ZNF737O75373 536 aa2.15□□□□□ -2.07
VIM-210ENST00000637053 GAS8-AS1O95177 125 aa2.15□□□□□ -2.07
VIM-210ENST00000637053 FUSP35637 526 aaKnown RBP eCLIP2.15□□□□□ -2.07
VIM-210ENST00000637053 UBE2AP49459 152 aa2.15□□□□□ -2.07
VIM-210ENST00000637053 DSCR9P59020 149 aa2.15□□□□□ -2.07
VIM-210ENST00000637053 KRTAP10-12P60413 245 aa2.15□□□□□ -2.07
VIM-210ENST00000637053 PCBD1P61457 104 aa2.15□□□□□ -2.07
VIM-210ENST00000637053 RPL18Q07020 188 aaKnown RBP2.15□□□□□ -2.07
VIM-210ENST00000637053 DAZAP2Q15038 168 aaPredicted RBP2.15□□□□□ -2.07
VIM-210ENST00000637053 ELOBQ15370 118 aa2.15□□□□□ -2.07
VIM-210ENST00000637053 PMCHL1Q16048 86 aa2.15□□□□□ -2.07
VIM-210ENST00000637053 NMSQ5H8A3 153 aa2.15□□□□□ -2.07
VIM-210ENST00000637053 FAM78AQ5JUQ0 283 aa2.15□□□□□ -2.07
VIM-210ENST00000637053 C10orf25Q5T742 122 aa2.15□□□□□ -2.07
VIM-210ENST00000637053 ZNF322Q6U7Q0 402 aaPredicted RBP2.15□□□□□ -2.07
VIM-210ENST00000637053 SPATA12Q7Z6I5 190 aa2.15□□□□□ -2.07
VIM-210ENST00000637053 FAM72BQ86X60 149 aa2.15□□□□□ -2.07
VIM-210ENST00000637053 AMN1Q8IY45 258 aa2.15□□□□□ -2.07
VIM-210ENST00000637053 OR5AS1Q8N127 324 aa2.15□□□□□ -2.07
VIM-210ENST00000637053 POM121L12Q8N7R1 296 aa2.15□□□□□ -2.07
VIM-210ENST00000637053 OR2T35Q8NGX2 323 aa2.15□□□□□ -2.07
VIM-210ENST00000637053 CLDND2Q8NHS1 167 aa2.15□□□□□ -2.07
VIM-210ENST00000637053 TSKUQ8WUA8 353 aa2.15□□□□□ -2.07
VIM-210ENST00000637053 LINC00479Q96M42 142 aa2.15□□□□□ -2.07
VIM-210ENST00000637053 LINC00597Q9H2U6 94 aa2.15□□□□□ -2.07
VIM-210ENST00000637053 TMEM242Q9NWH2 141 aa2.15□□□□□ -2.07
VIM-210ENST00000637053 ANKRD31Q8N7Z5 1873 aa2.15□□□□□ -2.07
VIM-210ENST00000637053 SBF2Q86WG5 1849 aa2.14□□□□□ -2.07
VIM-210ENST00000637053 DOCK8Q8NF50 2099 aa2.14□□□□□ -2.07
VIM-210ENST00000637053 ZNF638Q14966 1978 aaKnown RBP2.14□□□□□ -2.07
VIM-210ENST00000637053 CC2D2AQ9P2K1 1620 aa2.14□□□□□ -2.07
VIM-210ENST00000637053 POLEQ07864 2286 aa2.14□□□□□ -2.07
VIM-210ENST00000637053 EFCAB5A4FU69 1503 aa2.14□□□□□ -2.07
VIM-210ENST00000637053 URB2Q14146 1524 aaKnown RBP2.14□□□□□ -2.07
VIM-210ENST00000637053 UBE2L5PA0A1B0GUS4 154 aa2.14□□□□□ -2.07
VIM-210ENST00000637053 C16orf97H3BN30 126 aa2.14□□□□□ -2.07
VIM-210ENST00000637053 K7EM74 188 aa2.14□□□□□ -2.07
VIM-210ENST00000637053 ATOX1O00244 68 aa2.14□□□□□ -2.07
VIM-210ENST00000637053 LEPROTO15243 131 aa2.14□□□□□ -2.07
VIM-210ENST00000637053 TIMM17BO60830 172 aa2.14□□□□□ -2.07
VIM-210ENST00000637053 CD28P10747 220 aa2.14□□□□□ -2.07
VIM-210ENST00000637053 CCL4P13236 92 aa2.14□□□□□ -2.07
VIM-210ENST00000637053 ATP5EP56381 51 aaPredicted RBP2.14□□□□□ -2.07
VIM-210ENST00000637053 UBE2L3P68036 154 aaKnown RBP2.14□□□□□ -2.07
VIM-210ENST00000637053 FUT5Q11128 374 aa2.14□□□□□ -2.07
VIM-210ENST00000637053 KISS1Q15726 138 aa2.14□□□□□ -2.07
VIM-210ENST00000637053 C9orf66Q5T8R8 295 aa2.14□□□□□ -2.07
VIM-210ENST00000637053 FAM104BQ5XKR9 115 aa2.14□□□□□ -2.07
VIM-210ENST00000637053 XAF1Q6GPH4 301 aa2.14□□□□□ -2.07
VIM-210ENST00000637053 NOXRED1Q6NXP6 359 aa2.14□□□□□ -2.07
VIM-210ENST00000637053 IGFL3Q6UXB1 125 aa2.14□□□□□ -2.07
VIM-210ENST00000637053 PATE2Q6UY27 113 aa2.14□□□□□ -2.07
VIM-210ENST00000637053 SOSTDC1Q6X4U4 206 aa2.14□□□□□ -2.07
VIM-210ENST00000637053 TIFABQ6ZNK6 161 aa2.14□□□□□ -2.07
VIM-210ENST00000637053 SH2D6Q7Z4S9 175 aa2.14□□□□□ -2.07
VIM-210ENST00000637053 C5orf38Q86SI9 138 aa2.14□□□□□ -2.07
VIM-210ENST00000637053 FAM216BQ8N7L0 139 aa2.14□□□□□ -2.07
VIM-210ENST00000637053 Q8N8P6 123 aa2.14□□□□□ -2.07
VIM-210ENST00000637053 MYOZ3Q8TDC0 251 aa2.14□□□□□ -2.07
VIM-210ENST00000637053 B9D2Q9BPU9 175 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms