RNA–Protein interactions for RNA: ENST00000636022.1

CACNA1A-222, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 3

Gene CACNA1A, Length 552 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-222	ENST00000636022	SRR	Q9GZT4	340 aa		5.23	□□□□□ -1.57
CACNA1A-222	ENST00000636022	SLC35B3	Q9H1N7	401 aa		5.23	□□□□□ -1.57
CACNA1A-222	ENST00000636022	SLC25A32	Q9H2D1	315 aa		5.23	□□□□□ -1.57
CACNA1A-222	ENST00000636022	SLC45A2	Q9UMX9	530 aa		5.23	□□□□□ -1.57
CACNA1A-222	ENST00000636022	LRP1B	Q9NZR2	4599 aa		5.23	□□□□□ -1.57
CACNA1A-222	ENST00000636022		A0A1B0GV90	55 aa		5.22	□□□□□ -1.57
CACNA1A-222	ENST00000636022	TMEM189	A5PLL7	270 aa		5.22	□□□□□ -1.57
CACNA1A-222	ENST00000636022		H3BP45	60 aa		5.22	□□□□□ -1.57
CACNA1A-222	ENST00000636022	ADAP1	O75689	374 aa		5.22	□□□□□ -1.57
CACNA1A-222	ENST00000636022	SPART-AS1	P0CW21	52 aa		5.22	□□□□□ -1.57
CACNA1A-222	ENST00000636022	GATA2	P23769	480 aa	Predicted RBP	5.22	□□□□□ -1.57
CACNA1A-222	ENST00000636022	DEFA1	P59665	94 aa		5.22	□□□□□ -1.57
CACNA1A-222	ENST00000636022	DEFA3	P59666	94 aa		5.22	□□□□□ -1.57
CACNA1A-222	ENST00000636022	RPP30	P78346	268 aa	Known RBP	5.22	□□□□□ -1.57
CACNA1A-222	ENST00000636022	PSG9	Q00887	426 aa		5.22	□□□□□ -1.57
CACNA1A-222	ENST00000636022	LBH	Q53QV2	105 aa	Predicted RBP	5.22	□□□□□ -1.57
CACNA1A-222	ENST00000636022	SPANXN5	Q5MJ07	72 aa		5.22	□□□□□ -1.57
CACNA1A-222	ENST00000636022	FAM78B	Q5VT40	261 aa		5.22	□□□□□ -1.57
CACNA1A-222	ENST00000636022	AMTN	Q6UX39	209 aa		5.22	□□□□□ -1.57
CACNA1A-222	ENST00000636022	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		5.22	□□□□□ -1.57
CACNA1A-222	ENST00000636022	C1orf158	Q8N1D5	194 aa		5.22	□□□□□ -1.57
CACNA1A-222	ENST00000636022	OR4D5	Q8NGN0	318 aa		5.22	□□□□□ -1.57
CACNA1A-222	ENST00000636022	COQ8A	Q8NI60	647 aa		5.22	□□□□□ -1.57
CACNA1A-222	ENST00000636022	RSG1	Q9BU20	258 aa		5.22	□□□□□ -1.57
CACNA1A-222	ENST00000636022	CCDC32	Q9BV29	185 aa		5.22	□□□□□ -1.57
CACNA1A-222	ENST00000636022	DKK2	Q9UBU2	259 aa		5.22	□□□□□ -1.57
CACNA1A-222	ENST00000636022	RFNG	Q9Y644	331 aa		5.22	□□□□□ -1.57
CACNA1A-222	ENST00000636022	HSPG2	P98160	4391 aa		5.22	□□□□□ -1.57
CACNA1A-222	ENST00000636022	DNAH5	Q8TE73	4624 aa		5.21	□□□□□ -1.58
CACNA1A-222	ENST00000636022	TRAV8-2	A0A0B4J237	113 aa		5.21	□□□□□ -1.58
CACNA1A-222	ENST00000636022	PMS2P5	A8MQ11	134 aa		5.21	□□□□□ -1.58
CACNA1A-222	ENST00000636022	CIDEA	O60543	219 aa		5.21	□□□□□ -1.58
CACNA1A-222	ENST00000636022	EIF3G	O75821	320 aa	Known RBP eCLIP	5.21	□□□□□ -1.58
CACNA1A-222	ENST00000636022	NDUFB6	O95139	128 aa		5.21	□□□□□ -1.58
CACNA1A-222	ENST00000636022	ORM2	P19652	201 aa		5.21	□□□□□ -1.58
CACNA1A-222	ENST00000636022	GALR1	P47211	349 aa		5.21	□□□□□ -1.58
CACNA1A-222	ENST00000636022	EMP1	P54849	157 aa		5.21	□□□□□ -1.58
CACNA1A-222	ENST00000636022	SPANXN2	Q5MJ10	180 aa		5.21	□□□□□ -1.58
CACNA1A-222	ENST00000636022	FAM222A	Q5U5X8	452 aa		5.21	□□□□□ -1.58
CACNA1A-222	ENST00000636022	EBLN2	Q6P2I7	272 aa		5.21	□□□□□ -1.58
CACNA1A-222	ENST00000636022	ACOT7L	Q6ZUV0	252 aa		5.21	□□□□□ -1.58
CACNA1A-222	ENST00000636022	TMEM144	Q7Z5S9	345 aa		5.21	□□□□□ -1.58
CACNA1A-222	ENST00000636022	POM121L12	Q8N7R1	296 aa		5.21	□□□□□ -1.58
CACNA1A-222	ENST00000636022	BPIFC	Q8NFQ6	507 aa		5.21	□□□□□ -1.58
CACNA1A-222	ENST00000636022	OR4B1	Q8NGF8	309 aa		5.21	□□□□□ -1.58
CACNA1A-222	ENST00000636022	SFT2D1	Q8WV19	159 aa		5.21	□□□□□ -1.58
CACNA1A-222	ENST00000636022	SMIM8	Q96KF7	97 aa		5.21	□□□□□ -1.58
CACNA1A-222	ENST00000636022	C16orf92	Q96LL3	132 aa		5.21	□□□□□ -1.58
CACNA1A-222	ENST00000636022	NDUFAF3	Q9BU61	184 aa		5.21	□□□□□ -1.58
CACNA1A-222	ENST00000636022	KRTAP17-1	Q9BYP8	105 aa		5.21	□□□□□ -1.58
CACNA1A-222	ENST00000636022	SLC25A22	Q9H936	323 aa		5.21	□□□□□ -1.58
CACNA1A-222	ENST00000636022	RPRM	Q9NS64	109 aa		5.21	□□□□□ -1.58
CACNA1A-222	ENST00000636022	DOK5	Q9P104	306 aa		5.21	□□□□□ -1.58
CACNA1A-222	ENST00000636022	FLVCR2	Q9UPI3	526 aa		5.21	□□□□□ -1.58
CACNA1A-222	ENST00000636022	STRAP	Q9Y3F4	350 aa	Known RBP	5.21	□□□□□ -1.58
CACNA1A-222	ENST00000636022	NACA	E9PAV3	2078 aa		5.2	□□□□□ -1.58
CACNA1A-222	ENST00000636022	IGHV3OR16-12	A0A075B7B8	117 aa		5.2	□□□□□ -1.58
CACNA1A-222	ENST00000636022	NAP1L6	A6NFF2	107 aa		5.2	□□□□□ -1.58
CACNA1A-222	ENST00000636022		H3BRN7	92 aa		5.2	□□□□□ -1.58
CACNA1A-222	ENST00000636022	CRX	O43186	299 aa	Predicted RBP	5.2	□□□□□ -1.58
CACNA1A-222	ENST00000636022	OR4E1	P0C645	316 aa		5.2	□□□□□ -1.58
CACNA1A-222	ENST00000636022		P0DMU3	169 aa		5.2	□□□□□ -1.58
CACNA1A-222	ENST00000636022	FAM231A	P0DMU4	169 aa		5.2	□□□□□ -1.58
CACNA1A-222	ENST00000636022	FAM231C	P0DMU5	169 aa		5.2	□□□□□ -1.58
CACNA1A-222	ENST00000636022	BTC	P35070	178 aa		5.2	□□□□□ -1.58
CACNA1A-222	ENST00000636022	AKR1D1	P51857	326 aa		5.2	□□□□□ -1.58
CACNA1A-222	ENST00000636022	PLP1	P60201	277 aa		5.2	□□□□□ -1.58
CACNA1A-222	ENST00000636022	AKR1C1	Q04828	323 aa		5.2	□□□□□ -1.58
CACNA1A-222	ENST00000636022	FGL1	Q08830	312 aa		5.2	□□□□□ -1.58
CACNA1A-222	ENST00000636022	RNF212	Q495C1	297 aa		5.2	□□□□□ -1.58
CACNA1A-222	ENST00000636022	IGFL4	Q6B9Z1	124 aa		5.2	□□□□□ -1.58
CACNA1A-222	ENST00000636022	TMEM14EP	Q6UXP3	125 aa		5.2	□□□□□ -1.58
CACNA1A-222	ENST00000636022	CYP2G1P	Q6ZSU1	146 aa		5.2	□□□□□ -1.58
CACNA1A-222	ENST00000636022	OR1B1	Q8NGR6	318 aa		5.2	□□□□□ -1.58
CACNA1A-222	ENST00000636022	FAM210B	Q96KR6	192 aa		5.2	□□□□□ -1.58
CACNA1A-222	ENST00000636022	HYLS1	Q96M11	299 aa		5.2	□□□□□ -1.58
CACNA1A-222	ENST00000636022	GPR82	Q96P67	336 aa		5.2	□□□□□ -1.58
CACNA1A-222	ENST00000636022	SHANK2-AS3	Q9BTD1	123 aa		5.2	□□□□□ -1.58
CACNA1A-222	ENST00000636022	TMEM147	Q9BVK8	224 aa		5.2	□□□□□ -1.58
CACNA1A-222	ENST00000636022	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	5.2	□□□□□ -1.58
CACNA1A-222	ENST00000636022	NUDT15	Q9NV35	164 aa		5.2	□□□□□ -1.58
CACNA1A-222	ENST00000636022	PSENEN	Q9NZ42	101 aa		5.2	□□□□□ -1.58
CACNA1A-222	ENST00000636022	GOLT1B	Q9Y3E0	138 aa		5.2	□□□□□ -1.58
CACNA1A-222	ENST00000636022	TEX48	A0A1B0GUV7	120 aa		5.19	□□□□□ -1.58
CACNA1A-222	ENST00000636022	LOC102723971	A0A1B0GUV8	181 aa		5.19	□□□□□ -1.58
CACNA1A-222	ENST00000636022		A0A1B0GVY2	172 aa		5.19	□□□□□ -1.58
CACNA1A-222	ENST00000636022		K7EPK0	472 aa		5.19	□□□□□ -1.58
CACNA1A-222	ENST00000636022	RTL8C	O15255	209 aa		5.19	□□□□□ -1.58
CACNA1A-222	ENST00000636022	SSSCA1	O60232	199 aa		5.19	□□□□□ -1.58
CACNA1A-222	ENST00000636022	HYPM	O75409	117 aa		5.19	□□□□□ -1.58
CACNA1A-222	ENST00000636022	HBE1	P02100	147 aa		5.19	□□□□□ -1.58
CACNA1A-222	ENST00000636022	PRM2	P04554	102 aa		5.19	□□□□□ -1.58
CACNA1A-222	ENST00000636022	IL5	P05113	134 aa		5.19	□□□□□ -1.58
CACNA1A-222	ENST00000636022	ANXA7	P20073	488 aa	Known RBP	5.19	□□□□□ -1.58
CACNA1A-222	ENST00000636022	CNN1	P51911	297 aa	Known RBP	5.19	□□□□□ -1.58
CACNA1A-222	ENST00000636022	SELENOT	P62341	195 aa		5.19	□□□□□ -1.58
CACNA1A-222	ENST00000636022	DLK1	P80370	383 aa		5.19	□□□□□ -1.58
CACNA1A-222	ENST00000636022	DNLZ	Q5SXM8	178 aa		5.19	□□□□□ -1.58
CACNA1A-222	ENST00000636022	TRIQK	Q629K1	86 aa		5.19	□□□□□ -1.58
CACNA1A-222	ENST00000636022	PATE2	Q6UY27	113 aa		5.19	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms