RNA–Protein interactions for RNA: ENST00000635450.2

LINC00339-209, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 947 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-209ENST00000635450 IGKV3-20P01619 116 aa11.33□□□□□ -0.6
LINC00339-209ENST00000635450 C4BPBP20851 252 aa11.33□□□□□ -0.6
LINC00339-209ENST00000635450 DEFB1P60022 68 aa11.33□□□□□ -0.6
LINC00339-209ENST00000635450 GDF5OSQ5U4N7 250 aa11.33□□□□□ -0.6
LINC00339-209ENST00000635450 LCN15Q6UWW0 184 aa11.33□□□□□ -0.6
LINC00339-209ENST00000635450 OR11H7Q8NGC8 314 aa11.33□□□□□ -0.6
LINC00339-209ENST00000635450 C20orf173Q96LM9 149 aa11.33□□□□□ -0.6
LINC00339-209ENST00000635450 ATP5SQ99766 215 aa11.33□□□□□ -0.6
LINC00339-209ENST00000635450 WDR61Q9GZS3 305 aaKnown RBP11.33□□□□□ -0.6
LINC00339-209ENST00000635450 MRPS12O15235 138 aaKnown RBP11.32□□□□□ -0.6
LINC00339-209ENST00000635450 DEFB4AO15263 64 aa11.32□□□□□ -0.6
LINC00339-209ENST00000635450 GIG44P09565 113 aaPredicted RBP11.32□□□□□ -0.6
LINC00339-209ENST00000635450 CXCL2P19875 107 aa11.32□□□□□ -0.6
LINC00339-209ENST00000635450 IGFL4Q6B9Z1 124 aa11.32□□□□□ -0.6
LINC00339-209ENST00000635450 ZNF738Q8NE65 137 aa11.32□□□□□ -0.6
LINC00339-209ENST00000635450 SCGB1C1Q8TD33 95 aa11.32□□□□□ -0.6
LINC00339-209ENST00000635450 ASB13Q8WXK3 278 aa11.32□□□□□ -0.6
LINC00339-209ENST00000635450 CLUHP3Q96NS8 147 aa11.32□□□□□ -0.6
LINC00339-209ENST00000635450 SLC50A1Q9BRV3 221 aa11.32□□□□□ -0.6
LINC00339-209ENST00000635450 SMIM3Q9BZL3 60 aa11.32□□□□□ -0.6
LINC00339-209ENST00000635450 TRAV8-2A0A0B4J237 113 aa11.31□□□□□ -0.6
LINC00339-209ENST00000635450 A0A0J9YX75 114 aa11.31□□□□□ -0.6
LINC00339-209ENST00000635450 NUPR2A6NF83 97 aa11.31□□□□□ -0.6
LINC00339-209ENST00000635450 F6UB75 175 aa11.31□□□□□ -0.6
LINC00339-209ENST00000635450 DUSP14O95147 198 aaKnown RBP11.31□□□□□ -0.6
LINC00339-209ENST00000635450 OXA1LQ15070 435 aa11.31□□□□□ -0.6
LINC00339-209ENST00000635450 FAM78BQ5VT40 261 aa11.31□□□□□ -0.6
LINC00339-209ENST00000635450 MORN5Q5VZ52 161 aa11.31□□□□□ -0.6
LINC00339-209ENST00000635450 CEMP1Q6PRD7 247 aaPredicted RBP11.31□□□□□ -0.6
LINC00339-209ENST00000635450 RNF182Q8N6D2 247 aa11.31□□□□□ -0.6
LINC00339-209ENST00000635450 CLEC5AQ9NY25 188 aa11.31□□□□□ -0.6
LINC00339-209ENST00000635450 XCL2Q9UBD3 114 aa11.31□□□□□ -0.6
LINC00339-209ENST00000635450 VPS13DQ5THJ4 4388 aa11.3□□□□□ -0.6
LINC00339-209ENST00000635450 TRAV5A0A0B4J249 113 aa11.3□□□□□ -0.6
LINC00339-209ENST00000635450 LY6G6CO95867 125 aa11.3□□□□□ -0.6
LINC00339-209ENST00000635450 GIPP09681 153 aaPredicted RBP11.3□□□□□ -0.6
LINC00339-209ENST00000635450 NANOS2P60321 138 aaKnown RBP11.3□□□□□ -0.6
LINC00339-209ENST00000635450 PSG9Q00887 426 aa11.3□□□□□ -0.6
LINC00339-209ENST00000635450 PSG3Q16557 428 aa11.3□□□□□ -0.6
LINC00339-209ENST00000635450 HRH4Q9H3N8 390 aa11.3□□□□□ -0.6
LINC00339-209ENST00000635450 SNRPCP09234 159 aaKnown RBP11.29□□□□□ -0.6
LINC00339-209ENST00000635450 FXYD7P58549 80 aa11.29□□□□□ -0.6
LINC00339-209ENST00000635450 GUK1Q16774 197 aa11.29□□□□□ -0.6
LINC00339-209ENST00000635450 C11orf68Q9H3H3 251 aaKnown RBP11.29□□□□□ -0.6
LINC00339-209ENST00000635450 ZNF331Q9NQX6 463 aaPredicted RBP11.29□□□□□ -0.6
LINC00339-209ENST00000635450 DNAH10Q8IVF4 4471 aa11.28□□□□□ -0.6
LINC00339-209ENST00000635450 IGLC2P0DOY2 106 aa11.28□□□□□ -0.6
LINC00339-209ENST00000635450 MIFP14174 115 aa11.28□□□□□ -0.6
LINC00339-209ENST00000635450 HLA-DMBP28068 263 aa11.28□□□□□ -0.6
LINC00339-209ENST00000635450 CSNK1G2-AS1Q8NCQ2 148 aa11.28□□□□□ -0.6
LINC00339-209ENST00000635450 PHLDA1Q8WV24 401 aaPredicted RBP11.28□□□□□ -0.6
LINC00339-209ENST00000635450 MRPL32Q9BYC8 188 aaKnown RBP11.28□□□□□ -0.6
LINC00339-209ENST00000635450 MFFQ9GZY8 342 aa11.28□□□□□ -0.6
LINC00339-209ENST00000635450 SLC35B3Q9H1N7 401 aa11.28□□□□□ -0.6
LINC00339-209ENST00000635450 ZNF705EA8MWA4 302 aaPredicted RBP11.27□□□□□ -0.61
LINC00339-209ENST00000635450 H3BTX0 84 aa11.27□□□□□ -0.61
LINC00339-209ENST00000635450 CNN1P51911 297 aaKnown RBP11.27□□□□□ -0.61
LINC00339-209ENST00000635450 HIST1H1AQ02539 215 aaPredicted RBP11.27□□□□□ -0.61
LINC00339-209ENST00000635450 GCSAMLQ5JQS6 135 aa11.27□□□□□ -0.61
LINC00339-209ENST00000635450 FFAR4Q5NUL3 377 aa11.27□□□□□ -0.61
LINC00339-209ENST00000635450 RPUSD4Q96CM3 377 aaKnown RBP11.27□□□□□ -0.61
LINC00339-209ENST00000635450 PARD6GQ9BYG4 376 aaPredicted RBP11.27□□□□□ -0.61
LINC00339-209ENST00000635450 PPP1R14DQ9NXH3 145 aa11.27□□□□□ -0.61
LINC00339-209ENST00000635450 TMEM14CQ9P0S9 112 aa11.27□□□□□ -0.61
LINC00339-209ENST00000635450 H3BQ15 152 aa11.26□□□□□ -0.61
LINC00339-209ENST00000635450 AMBPP02760 352 aa11.26□□□□□ -0.61
LINC00339-209ENST00000635450 ZNF705DP0CH99 300 aaPredicted RBP11.26□□□□□ -0.61
LINC00339-209ENST00000635450 ZNF705BP0CI00 300 aaPredicted RBP11.26□□□□□ -0.61
LINC00339-209ENST00000635450 HIST1H1EP10412 219 aaKnown RBP11.26□□□□□ -0.61
LINC00339-209ENST00000635450 RHOBP62745 196 aa11.26□□□□□ -0.61
LINC00339-209ENST00000635450 RPP25LQ8N5L8 163 aaKnown RBP11.26□□□□□ -0.61
LINC00339-209ENST00000635450 Q8NAQ8 132 aa11.26□□□□□ -0.61
LINC00339-209ENST00000635450 INO80EQ8NBZ0 244 aaPredicted RBP11.26□□□□□ -0.61
LINC00339-209ENST00000635450 OR8A1Q8NGG7 326 aa11.26□□□□□ -0.61
LINC00339-209ENST00000635450 AQP10Q96PS8 301 aa11.26□□□□□ -0.61
LINC00339-209ENST00000635450 GOLT1BQ9Y3E0 138 aa11.26□□□□□ -0.61
LINC00339-209ENST00000635450 TIMM9Q9Y5J7 89 aa11.26□□□□□ -0.61
LINC00339-209ENST00000635450 X6R8D5 127 aa11.26□□□□□ -0.61
LINC00339-209ENST00000635450 IGHV3OR16-12A0A075B7B8 117 aa11.25□□□□□ -0.61
LINC00339-209ENST00000635450 IGHV4-28A0A0C4DH34 117 aa11.25□□□□□ -0.61
LINC00339-209ENST00000635450 A8MTW9 85 aa11.25□□□□□ -0.61
LINC00339-209ENST00000635450 SLC17A3O00476 420 aa11.25□□□□□ -0.61
LINC00339-209ENST00000635450 ZNF253O75346 499 aa11.25□□□□□ -0.61
LINC00339-209ENST00000635450 ZNF266Q14584 549 aa11.25□□□□□ -0.61
LINC00339-209ENST00000635450 MIR17HGQ75NE6 70 aa11.25□□□□□ -0.61
LINC00339-209ENST00000635450 OR2T35Q8NGX2 323 aa11.25□□□□□ -0.61
LINC00339-209ENST00000635450 C11orf45Q8TAV5 145 aa11.25□□□□□ -0.61
LINC00339-209ENST00000635450 SAT2Q96F10 170 aaPredicted RBP11.25□□□□□ -0.61
LINC00339-209ENST00000635450 WFDC1Q9HC57 220 aa11.25□□□□□ -0.61
LINC00339-209ENST00000635450 ZNF586Q9NXT0 402 aa11.25□□□□□ -0.61
LINC00339-209ENST00000635450 FUT9Q9Y231 359 aa11.25□□□□□ -0.61
LINC00339-209ENST00000635450 DNAH6Q9C0G6 4158 aa11.24□□□□□ -0.61
LINC00339-209ENST00000635450 FXYD6-FXYD2A0A087WZ82 144 aa11.24□□□□□ -0.61
LINC00339-209ENST00000635450 RBMY1A1P0DJD3 496 aaKnown RBP11.24□□□□□ -0.61
LINC00339-209ENST00000635450 RBMY1CP0DJD4 496 aa11.24□□□□□ -0.61
LINC00339-209ENST00000635450 PYYP10082 97 aa11.24□□□□□ -0.61
LINC00339-209ENST00000635450 PDE6HQ13956 83 aa11.24□□□□□ -0.61
LINC00339-209ENST00000635450 RBMY1FQ15415 496 aaKnown RBP11.24□□□□□ -0.61
LINC00339-209ENST00000635450 Q5BKY6 102 aa11.24□□□□□ -0.61
LINC00339-209ENST00000635450 BLNKQ8WV28 456 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms