RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 ALG5Q9Y673 324 aa11.4□□□□□ -0.59
LINC00339-207ENST00000634712 LCE6AA0A183 80 aa11.39□□□□□ -0.59
LINC00339-207ENST00000634712 CXCL2P19875 107 aa11.39□□□□□ -0.59
LINC00339-207ENST00000634712 PSG3Q16557 428 aa11.39□□□□□ -0.59
LINC00339-207ENST00000634712 CEMP1Q6PRD7 247 aaPredicted RBP11.39□□□□□ -0.59
LINC00339-207ENST00000634712 LCN15Q6UWW0 184 aa11.39□□□□□ -0.59
LINC00339-207ENST00000634712 Q8NAQ8 132 aa11.39□□□□□ -0.59
LINC00339-207ENST00000634712 THAP6Q8TBB0 222 aa11.39□□□□□ -0.59
LINC00339-207ENST00000634712 RNF126Q9BV68 326 aa11.39□□□□□ -0.59
LINC00339-207ENST00000634712 NPCDR1Q9BY65 106 aa11.39□□□□□ -0.59
LINC00339-207ENST00000634712 SLC35B3Q9H1N7 401 aa11.39□□□□□ -0.59
LINC00339-207ENST00000634712 X6R8D5 127 aa11.39□□□□□ -0.59
LINC00339-207ENST00000634712 IGHV3OR16-12A0A075B7B8 117 aa11.38□□□□□ -0.59
LINC00339-207ENST00000634712 MRPS12O15235 138 aaKnown RBP11.38□□□□□ -0.59
LINC00339-207ENST00000634712 SNRPCP09234 159 aaKnown RBP11.38□□□□□ -0.59
LINC00339-207ENST00000634712 CXCL3P19876 107 aa11.38□□□□□ -0.59
LINC00339-207ENST00000634712 NANOS2P60321 138 aaKnown RBP11.38□□□□□ -0.59
LINC00339-207ENST00000634712 PHLDA1Q8WV24 401 aaPredicted RBP11.38□□□□□ -0.59
LINC00339-207ENST00000634712 SLC50A1Q9BRV3 221 aa11.38□□□□□ -0.59
LINC00339-207ENST00000634712 MED28Q9H204 178 aa11.38□□□□□ -0.59
LINC00339-207ENST00000634712 PPP1R14DQ9NXH3 145 aa11.38□□□□□ -0.59
LINC00339-207ENST00000634712 C17orf112F2Z3M2 114 aa11.37□□□□□ -0.59
LINC00339-207ENST00000634712 RBMY1A1P0DJD3 496 aaKnown RBP11.37□□□□□ -0.59
LINC00339-207ENST00000634712 RBMY1CP0DJD4 496 aa11.37□□□□□ -0.59
LINC00339-207ENST00000634712 CNN1P51911 297 aaKnown RBP11.37□□□□□ -0.59
LINC00339-207ENST00000634712 RBMY1FQ15415 496 aaKnown RBP11.37□□□□□ -0.59
LINC00339-207ENST00000634712 MORN5Q5VZ52 161 aa11.37□□□□□ -0.59
LINC00339-207ENST00000634712 KCNIP2Q9NS61 270 aa11.37□□□□□ -0.59
LINC00339-207ENST00000634712 GOLT1BQ9Y3E0 138 aa11.37□□□□□ -0.59
LINC00339-207ENST00000634712 TRAV5A0A0B4J249 113 aa11.36□□□□□ -0.59
LINC00339-207ENST00000634712 AMBPP02760 352 aa11.36□□□□□ -0.59
LINC00339-207ENST00000634712 ZNF705DP0CH99 300 aaPredicted RBP11.36□□□□□ -0.59
LINC00339-207ENST00000634712 ZNF705BP0CI00 300 aaPredicted RBP11.36□□□□□ -0.59
LINC00339-207ENST00000634712 HLA-DMBP28068 263 aa11.36□□□□□ -0.59
LINC00339-207ENST00000634712 RPL12P30050 165 aaKnown RBP11.36□□□□□ -0.59
LINC00339-207ENST00000634712 RHOBP62745 196 aa11.36□□□□□ -0.59
LINC00339-207ENST00000634712 HIST1H1AQ02539 215 aaPredicted RBP11.36□□□□□ -0.59
LINC00339-207ENST00000634712 GUK1Q16774 197 aa11.36□□□□□ -0.59
LINC00339-207ENST00000634712 ATP5SQ99766 215 aa11.36□□□□□ -0.59
LINC00339-207ENST00000634712 WDR61Q9GZS3 305 aaKnown RBP11.36□□□□□ -0.59
LINC00339-207ENST00000634712 HRH4Q9H3N8 390 aa11.36□□□□□ -0.59
LINC00339-207ENST00000634712 ZNF331Q9NQX6 463 aaPredicted RBP11.36□□□□□ -0.59
LINC00339-207ENST00000634712 MBD2Q9UBB5 411 aa11.36□□□□□ -0.59
LINC00339-207ENST00000634712 HSPB11Q9Y547 144 aa11.36□□□□□ -0.59
LINC00339-207ENST00000634712 SMIM9A6NGZ8 99 aa11.35□□□□□ -0.59
LINC00339-207ENST00000634712 H3BTX0 84 aa11.35□□□□□ -0.59
LINC00339-207ENST00000634712 IFNA5P01569 189 aa11.35□□□□□ -0.59
LINC00339-207ENST00000634712 OR8A1Q8NGG7 326 aa11.35□□□□□ -0.59
LINC00339-207ENST00000634712 SCGB1C1Q8TD33 95 aa11.35□□□□□ -0.59
LINC00339-207ENST00000634712 RPUSD4Q96CM3 377 aaKnown RBP11.35□□□□□ -0.59
LINC00339-207ENST00000634712 TMEM208Q9BTX3 173 aa11.35□□□□□ -0.59
LINC00339-207ENST00000634712 DYNC2H1Q8NCM8 4307 aaKnown RBP11.34□□□□□ -0.59
LINC00339-207ENST00000634712 IGLC2P0DOY2 106 aa11.34□□□□□ -0.59
LINC00339-207ENST00000634712 ZNF705AQ6ZN79 300 aaPredicted RBP11.34□□□□□ -0.59
LINC00339-207ENST00000634712 OR11H7Q8NGC8 314 aa11.34□□□□□ -0.59
LINC00339-207ENST00000634712 NEU1Q99519 415 aa11.34□□□□□ -0.59
LINC00339-207ENST00000634712 SMIM3Q9BZL3 60 aa11.34□□□□□ -0.59
LINC00339-207ENST00000634712 TMEM189A5PLL7 270 aa11.33□□□□□ -0.6
LINC00339-207ENST00000634712 A8MTW9 85 aa11.33□□□□□ -0.6
LINC00339-207ENST00000634712 H3BQ15 152 aa11.33□□□□□ -0.6
LINC00339-207ENST00000634712 SPINK13Q1W4C9 94 aa11.33□□□□□ -0.6
LINC00339-207ENST00000634712 AMTNQ6UX39 209 aa11.33□□□□□ -0.6
LINC00339-207ENST00000634712 IGF2BP2-AS1Q96M15 143 aa11.33□□□□□ -0.6
LINC00339-207ENST00000634712 RFNGQ9Y644 331 aa11.33□□□□□ -0.6
LINC00339-207ENST00000634712 ZNF705FA8MVS1 300 aaPredicted RBP11.32□□□□□ -0.6
LINC00339-207ENST00000634712 C11orf94C9JXX5 98 aa11.32□□□□□ -0.6
LINC00339-207ENST00000634712 M0R2Z0 102 aa11.32□□□□□ -0.6
LINC00339-207ENST00000634712 HBE1P02100 147 aa11.32□□□□□ -0.6
LINC00339-207ENST00000634712 EMP1P54849 157 aa11.32□□□□□ -0.6
LINC00339-207ENST00000634712 FCN2Q15485 313 aa11.32□□□□□ -0.6
LINC00339-207ENST00000634712 RGS21Q2M5E4 152 aa11.32□□□□□ -0.6
LINC00339-207ENST00000634712 GCSAMLQ5JQS6 135 aa11.32□□□□□ -0.6
LINC00339-207ENST00000634712 OR10J6PQ8NGY7 276 aa11.32□□□□□ -0.6
LINC00339-207ENST00000634712 TMEM14CQ9P0S9 112 aa11.32□□□□□ -0.6
LINC00339-207ENST00000634712 TIMM9Q9Y5J7 89 aa11.32□□□□□ -0.6
LINC00339-207ENST00000634712 RYR3Q15413 4870 aa11.32□□□□□ -0.6
LINC00339-207ENST00000634712 BOLA2-SMG1P6H3BVE0 249 aa11.31□□□□□ -0.6
LINC00339-207ENST00000634712 SLC17A3O00476 420 aa11.31□□□□□ -0.6
LINC00339-207ENST00000634712 INSP01308 110 aa11.31□□□□□ -0.6
LINC00339-207ENST00000634712 HIST1H1EP10412 219 aaKnown RBP11.31□□□□□ -0.6
LINC00339-207ENST00000634712 C1orf158Q8N1D5 194 aa11.31□□□□□ -0.6
LINC00339-207ENST00000634712 C2CD4CQ8TF44 421 aa11.31□□□□□ -0.6
LINC00339-207ENST00000634712 SAT2Q96F10 170 aaPredicted RBP11.31□□□□□ -0.6
LINC00339-207ENST00000634712 ZNF586Q9NXT0 402 aa11.31□□□□□ -0.6
LINC00339-207ENST00000634712 ZNF253O75346 499 aa11.3□□□□□ -0.6
LINC00339-207ENST00000634712 PRB4P10163 310 aaPredicted RBP11.3□□□□□ -0.6
LINC00339-207ENST00000634712 RRN3P1Q2M238 152 aa11.3□□□□□ -0.6
LINC00339-207ENST00000634712 BLNKQ8WV28 456 aa11.3□□□□□ -0.6
LINC00339-207ENST00000634712 MRPL32Q9BYC8 188 aaKnown RBP11.3□□□□□ -0.6
LINC00339-207ENST00000634712 LYSTQ99698 3801 aa11.3□□□□□ -0.6
LINC00339-207ENST00000634712 TRBV19A0A075B6N1 114 aa11.29□□□□□ -0.6
LINC00339-207ENST00000634712 SPART-AS1P0CW21 52 aa11.29□□□□□ -0.6
LINC00339-207ENST00000634712 PYYP10082 97 aa11.29□□□□□ -0.6
LINC00339-207ENST00000634712 FFAR4Q5NUL3 377 aa11.29□□□□□ -0.6
LINC00339-207ENST00000634712 MIR17HGQ75NE6 70 aa11.29□□□□□ -0.6
LINC00339-207ENST00000634712 SACSQ9NZJ4 4579 aa11.29□□□□□ -0.6
LINC00339-207ENST00000634712 TRAV12-2A0A075B6T6 113 aa11.28□□□□□ -0.6
LINC00339-207ENST00000634712 TRAV10A0A0B4J240 114 aa11.28□□□□□ -0.6
LINC00339-207ENST00000634712 LOC102723971A0A1B0GUV8 181 aa11.28□□□□□ -0.6
LINC00339-207ENST00000634712 LY6G6CO95867 125 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms