RNA–Protein interactions for RNA: ENST00000629570.1

LINC00550-202, long intergenic non-protein coding RNA 550, humanhuman

TSL 3

Gene LINC00550, Length 317 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-202ENST00000629570 AGRNO00468 2067 aa4.08□□□□□ -1.76
LINC00550-202ENST00000629570 MRPS12O15235 138 aaKnown RBP4.08□□□□□ -1.76
LINC00550-202ENST00000629570 ARPC5O15511 151 aa4.08□□□□□ -1.76
LINC00550-202ENST00000629570 IFNA5P01569 189 aa4.08□□□□□ -1.76
LINC00550-202ENST00000629570 NHLRC4P0CG21 123 aaPredicted RBP4.08□□□□□ -1.76
LINC00550-202ENST00000629570 PRB4P10163 310 aaPredicted RBP4.08□□□□□ -1.76
LINC00550-202ENST00000629570 RPL7P18124 248 aaKnown RBP4.08□□□□□ -1.76
LINC00550-202ENST00000629570 ATF4P18848 351 aaPredicted RBP4.08□□□□□ -1.76
LINC00550-202ENST00000629570 S100A7P31151 101 aa4.08□□□□□ -1.76
LINC00550-202ENST00000629570 PSMB3P49720 205 aa4.08□□□□□ -1.76
LINC00550-202ENST00000629570 SNRPD3P62318 126 aaKnown RBP4.08□□□□□ -1.76
LINC00550-202ENST00000629570 ACTL10Q5JWF8 245 aa4.08□□□□□ -1.76
LINC00550-202ENST00000629570 GDF5OSQ5U4N7 250 aa4.08□□□□□ -1.76
LINC00550-202ENST00000629570 SPATA31B1PQ5VZV4 182 aa4.08□□□□□ -1.76
LINC00550-202ENST00000629570 Q6ZNX1 250 aa4.08□□□□□ -1.76
LINC00550-202ENST00000629570 Q6ZRG5 221 aa4.08□□□□□ -1.76
LINC00550-202ENST00000629570 HUWE1Q7Z6Z7 4374 aaKnown RBP4.08□□□□□ -1.76
LINC00550-202ENST00000629570 RNF182Q8N6D2 247 aa4.08□□□□□ -1.76
LINC00550-202ENST00000629570 LINC00052Q96N35 136 aa4.08□□□□□ -1.76
LINC00550-202ENST00000629570 GPR82Q96P67 336 aa4.08□□□□□ -1.76
LINC00550-202ENST00000629570 RCHY1Q96PM5 261 aa4.08□□□□□ -1.76
LINC00550-202ENST00000629570 SEPSECSQ9HD40 501 aaKnown RBP4.08□□□□□ -1.76
LINC00550-202ENST00000629570 DNAJC4Q9NNZ3 241 aa4.08□□□□□ -1.76
LINC00550-202ENST00000629570 TNFSF18Q9UNG2 199 aa4.08□□□□□ -1.76
LINC00550-202ENST00000629570 U3KQK5 164 aa4.08□□□□□ -1.76
LINC00550-202ENST00000629570 A0A087X0K7 114 aa4.07□□□□□ -1.76
LINC00550-202ENST00000629570 F6UB75 175 aa4.07□□□□□ -1.76
LINC00550-202ENST00000629570 H3BQ15 152 aa4.07□□□□□ -1.76
LINC00550-202ENST00000629570 SLC17A3O00476 420 aa4.07□□□□□ -1.76
LINC00550-202ENST00000629570 ISLRO14498 428 aa4.07□□□□□ -1.76
LINC00550-202ENST00000629570 EIF3GO75821 320 aaKnown RBP eCLIP4.07□□□□□ -1.76
LINC00550-202ENST00000629570 IGLC2P0DOY2 106 aa4.07□□□□□ -1.76
LINC00550-202ENST00000629570 PYYP10082 97 aa4.07□□□□□ -1.76
LINC00550-202ENST00000629570 C4BPBP20851 252 aa4.07□□□□□ -1.76
LINC00550-202ENST00000629570 HLA-DMBP28068 263 aa4.07□□□□□ -1.76
LINC00550-202ENST00000629570 MEOX2P50222 304 aa4.07□□□□□ -1.76
LINC00550-202ENST00000629570 APOC4P55056 127 aa4.07□□□□□ -1.76
LINC00550-202ENST00000629570 CMC4P56277 68 aaPredicted RBP4.07□□□□□ -1.76
LINC00550-202ENST00000629570 ZNF266Q14584 549 aa4.07□□□□□ -1.76
LINC00550-202ENST00000629570 DEFB135Q30KP9 77 aa4.07□□□□□ -1.76
LINC00550-202ENST00000629570 FFAR4Q5NUL3 377 aa4.07□□□□□ -1.76
LINC00550-202ENST00000629570 FAM78BQ5VT40 261 aa4.07□□□□□ -1.76
LINC00550-202ENST00000629570 RPL7L1Q6DKI1 246 aaKnown RBP4.07□□□□□ -1.76
LINC00550-202ENST00000629570 MIR17HGQ75NE6 70 aa4.07□□□□□ -1.76
LINC00550-202ENST00000629570 S100A7AQ86SG5 101 aa4.07□□□□□ -1.76
LINC00550-202ENST00000629570 TRPT1Q86TN4 253 aaKnown RBP4.07□□□□□ -1.76
LINC00550-202ENST00000629570 BPIFA4PQ86YQ2 179 aa4.07□□□□□ -1.76
LINC00550-202ENST00000629570 STHQ8IWL8 128 aa4.07□□□□□ -1.76
LINC00550-202ENST00000629570 ZNF709Q8N972 641 aa4.07□□□□□ -1.76
LINC00550-202ENST00000629570 HSD17B11Q8NBQ5 300 aa4.07□□□□□ -1.76
LINC00550-202ENST00000629570 INO80EQ8NBZ0 244 aaPredicted RBP4.07□□□□□ -1.76
LINC00550-202ENST00000629570 OR11H4Q8NGC9 324 aa4.07□□□□□ -1.76
LINC00550-202ENST00000629570 OR1L4Q8NGR5 311 aa4.07□□□□□ -1.76
LINC00550-202ENST00000629570 SCGB1C1Q8TD33 95 aa4.07□□□□□ -1.76
LINC00550-202ENST00000629570 GATAD1Q8WUU5 269 aa4.07□□□□□ -1.76
LINC00550-202ENST00000629570 C16orf92Q96LL3 132 aa4.07□□□□□ -1.76
LINC00550-202ENST00000629570 PFDN5Q99471 154 aa4.07□□□□□ -1.76
LINC00550-202ENST00000629570 PARD6GQ9BYG4 376 aaPredicted RBP4.07□□□□□ -1.76
LINC00550-202ENST00000629570 SH3BGRL3Q9H299 93 aa4.07□□□□□ -1.76
LINC00550-202ENST00000629570 ZMAT4Q9H898 229 aa4.07□□□□□ -1.76
LINC00550-202ENST00000629570 KCNIP2Q9NS61 270 aa4.07□□□□□ -1.76
LINC00550-202ENST00000629570 KIR2DL5BA0A0G2JN68 375 aa4.06□□□□□ -1.76
LINC00550-202ENST00000629570 KIR2DL5BA0A0G2JPC4 375 aa4.06□□□□□ -1.76
LINC00550-202ENST00000629570 C17orf112F2Z3M2 114 aa4.06□□□□□ -1.76
LINC00550-202ENST00000629570 H3BMM0 161 aa4.06□□□□□ -1.76
LINC00550-202ENST00000629570 CA1P00915 261 aaPredicted RBP4.06□□□□□ -1.76
LINC00550-202ENST00000629570 IGKV3-20P01619 116 aa4.06□□□□□ -1.76
LINC00550-202ENST00000629570 GIG44P09565 113 aaPredicted RBP4.06□□□□□ -1.76
LINC00550-202ENST00000629570 ZNF705DP0CH99 300 aaPredicted RBP4.06□□□□□ -1.76
LINC00550-202ENST00000629570 ZNF705BP0CI00 300 aaPredicted RBP4.06□□□□□ -1.76
LINC00550-202ENST00000629570 HLA-DRB4P13762 266 aa4.06□□□□□ -1.76
LINC00550-202ENST00000629570 ID1P41134 155 aa4.06□□□□□ -1.76
LINC00550-202ENST00000629570 RAB2AP61019 212 aa4.06□□□□□ -1.76
LINC00550-202ENST00000629570 SAMD13Q5VXD3 122 aa4.06□□□□□ -1.76
LINC00550-202ENST00000629570 LCN15Q6UWW0 184 aa4.06□□□□□ -1.76
LINC00550-202ENST00000629570 FOXI2Q6ZQN5 318 aa4.06□□□□□ -1.76
LINC00550-202ENST00000629570 KIR2DL5AQ8N109 375 aa4.06□□□□□ -1.76
LINC00550-202ENST00000629570 KIR2DL5BQ8NHK3 375 aa4.06□□□□□ -1.76
LINC00550-202ENST00000629570 ST6GAL2Q96JF0 529 aa4.06□□□□□ -1.76
LINC00550-202ENST00000629570 FAM167A-AS1Q96KT0 104 aa4.06□□□□□ -1.76
LINC00550-202ENST00000629570 OVOL2Q9BRP0 275 aa4.06□□□□□ -1.76
LINC00550-202ENST00000629570 SLC25A2Q9BXI2 301 aa4.06□□□□□ -1.76
LINC00550-202ENST00000629570 MFFQ9GZY8 342 aa4.06□□□□□ -1.76
LINC00550-202ENST00000629570 CSTL1Q9H114 145 aa4.06□□□□□ -1.76
LINC00550-202ENST00000629570 HRH4Q9H3N8 390 aa4.06□□□□□ -1.76
LINC00550-202ENST00000629570 SAV1Q9H4B6 383 aaPredicted RBP4.06□□□□□ -1.76
LINC00550-202ENST00000629570 ZNF586Q9NXT0 402 aa4.06□□□□□ -1.76
LINC00550-202ENST00000629570 FUT9Q9Y231 359 aa4.06□□□□□ -1.76
LINC00550-202ENST00000629570 HLA-DRB4X5D2U9 266 aa4.06□□□□□ -1.76
LINC00550-202ENST00000629570 TRBV19A0A075B6N1 114 aa4.05□□□□□ -1.76
LINC00550-202ENST00000629570 A0A0J9YX75 114 aa4.05□□□□□ -1.76
LINC00550-202ENST00000629570 A0A1B0GVG6 124 aa4.05□□□□□ -1.76
LINC00550-202ENST00000629570 SPRY2O43597 315 aa4.05□□□□□ -1.76
LINC00550-202ENST00000629570 NDUFB4O95168 129 aa4.05□□□□□ -1.76
LINC00550-202ENST00000629570 OR10J4P0C629 311 aa4.05□□□□□ -1.76
LINC00550-202ENST00000629570 CXCL2P19875 107 aa4.05□□□□□ -1.76
LINC00550-202ENST00000629570 ATP6V0CP27449 155 aa4.05□□□□□ -1.76
LINC00550-202ENST00000629570 CD300CQ08708 224 aa4.05□□□□□ -1.76
LINC00550-202ENST00000629570 Q6ZWC4 215 aa4.05□□□□□ -1.76
LINC00550-202ENST00000629570 ZNF738Q8NE65 137 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms