RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 SLC50A1Q9BRV3 221 aa14.93□□□□□ -0.02
PTCD3-220ENST00000627371 CSTL1Q9H114 145 aa14.93□□□□□ -0.02
PTCD3-220ENST00000627371 SAV1Q9H4B6 383 aaPredicted RBP14.93□□□□□ -0.02
PTCD3-220ENST00000627371 RPRMQ9NS64 109 aa14.93□□□□□ -0.02
PTCD3-220ENST00000627371 HLA-DRB4X5D2U9 266 aa14.93□□□□□ -0.02
PTCD3-220ENST00000627371 H3BQ15 152 aa14.92□□□□□ -0.02
PTCD3-220ENST00000627371 SNRPCP09234 159 aaKnown RBP14.92□□□□□ -0.02
PTCD3-220ENST00000627371 GUK1Q16774 197 aa14.92□□□□□ -0.02
PTCD3-220ENST00000627371 ACOT6Q3I5F7 207 aaPredicted RBP14.92□□□□□ -0.02
PTCD3-220ENST00000627371 IGFL4Q6B9Z1 124 aa14.92□□□□□ -0.02
PTCD3-220ENST00000627371 KCNRGQ8N5I3 272 aa14.92□□□□□ -0.02
PTCD3-220ENST00000627371 LRRC20Q8TCA0 184 aa14.92□□□□□ -0.02
PTCD3-220ENST00000627371 RETNQ9HD89 108 aa14.92□□□□□ -0.02
PTCD3-220ENST00000627371 ZNF331Q9NQX6 463 aaPredicted RBP14.92□□□□□ -0.02
PTCD3-220ENST00000627371 H3BMM0 161 aa14.91□□□□□ -0.02
PTCD3-220ENST00000627371 JTBO76095 146 aa14.91□□□□□ -0.02
PTCD3-220ENST00000627371 M6PRP20645 277 aa14.91□□□□□ -0.02
PTCD3-220ENST00000627371 DEFB1P60022 68 aa14.91□□□□□ -0.02
PTCD3-220ENST00000627371 RHOBP62745 196 aa14.91□□□□□ -0.02
PTCD3-220ENST00000627371 GDF5OSQ5U4N7 250 aa14.91□□□□□ -0.02
PTCD3-220ENST00000627371 Q6ZWC4 215 aa14.91□□□□□ -0.02
PTCD3-220ENST00000627371 RNF182Q8N6D2 247 aa14.91□□□□□ -0.02
PTCD3-220ENST00000627371 SAT2Q96F10 170 aaPredicted RBP14.91□□□□□ -0.02
PTCD3-220ENST00000627371 ZNF586Q9NXT0 402 aa14.91□□□□□ -0.02
PTCD3-220ENST00000627371 STAB2Q8WWQ8 2551 aa14.9□□□□□ -0.02
PTCD3-220ENST00000627371 H3BTX0 84 aa14.9□□□□□ -0.02
PTCD3-220ENST00000627371 SLC17A3O00476 420 aa14.9□□□□□ -0.02
PTCD3-220ENST00000627371 PYYP10082 97 aa14.9□□□□□ -0.02
PTCD3-220ENST00000627371 HIST1H1EP10412 219 aaKnown RBP14.9□□□□□ -0.02
PTCD3-220ENST00000627371 SPP1P10451 314 aa14.9□□□□□ -0.02
PTCD3-220ENST00000627371 RAB2AP61019 212 aa14.9□□□□□ -0.02
PTCD3-220ENST00000627371 SERF2P84101 59 aa14.9□□□□□ -0.02
PTCD3-220ENST00000627371 MORN3Q6PF18 240 aaPredicted RBP14.9□□□□□ -0.02
PTCD3-220ENST00000627371 GNPNAT1Q96EK6 184 aaPredicted RBP14.9□□□□□ -0.02
PTCD3-220ENST00000627371 SH3BGRL3Q9H299 93 aa14.9□□□□□ -0.02
PTCD3-220ENST00000627371 CYTL1Q9NRR1 136 aa14.9□□□□□ -0.02
PTCD3-220ENST00000627371 A0A0D9SG52 128 aa14.89□□□□□ -0.03
PTCD3-220ENST00000627371 ZNF253O75346 499 aa14.89□□□□□ -0.03
PTCD3-220ENST00000627371 HLA-DMBP28068 263 aa14.89□□□□□ -0.03
PTCD3-220ENST00000627371 DEFB135Q30KP9 77 aa14.89□□□□□ -0.03
PTCD3-220ENST00000627371 EBLN2Q6P2I7 272 aa14.89□□□□□ -0.03
PTCD3-220ENST00000627371 ARPC5LQ9BPX5 153 aa14.89□□□□□ -0.03
PTCD3-220ENST00000627371 OR51M1Q9H341 326 aa14.89□□□□□ -0.03
PTCD3-220ENST00000627371 TP53TG1Q9Y2A0 90 aa14.89□□□□□ -0.03
PTCD3-220ENST00000627371 TRBV19A0A075B6N1 114 aa14.88□□□□□ -0.03
PTCD3-220ENST00000627371 A0A0J9YX75 114 aa14.88□□□□□ -0.03
PTCD3-220ENST00000627371 F6UB75 175 aa14.88□□□□□ -0.03
PTCD3-220ENST00000627371 CA1P00915 261 aaPredicted RBP14.88□□□□□ -0.03
PTCD3-220ENST00000627371 TAS2R45P59539 299 aa14.88□□□□□ -0.03
PTCD3-220ENST00000627371 PDE6HQ13956 83 aa14.88□□□□□ -0.03
PTCD3-220ENST00000627371 PSG3Q16557 428 aa14.88□□□□□ -0.03
PTCD3-220ENST00000627371 KHDC3LQ587J8 217 aa14.88□□□□□ -0.03
PTCD3-220ENST00000627371 AKAP14Q86UN6 197 aa14.88□□□□□ -0.03
PTCD3-220ENST00000627371 ZNF738Q8NE65 137 aa14.88□□□□□ -0.03
PTCD3-220ENST00000627371 OR10G4Q8NGN3 311 aa14.88□□□□□ -0.03
PTCD3-220ENST00000627371 OR10G9Q8NGN4 311 aa14.88□□□□□ -0.03
PTCD3-220ENST00000627371 OR10G7Q8NGN6 311 aa14.88□□□□□ -0.03
PTCD3-220ENST00000627371 CLUHP3Q96NS8 147 aa14.88□□□□□ -0.03
PTCD3-220ENST00000627371 OVOL2Q9BRP0 275 aa14.88□□□□□ -0.03
PTCD3-220ENST00000627371 PAXXQ9BUH6 204 aa14.88□□□□□ -0.03
PTCD3-220ENST00000627371 CLEC5AQ9NY25 188 aa14.88□□□□□ -0.03
PTCD3-220ENST00000627371 OR7C2O60412 319 aa14.87□□□□□ -0.03
PTCD3-220ENST00000627371 MBP02144 154 aa14.87□□□□□ -0.03
PTCD3-220ENST00000627371 TMEM41BQ5BJD5 291 aa14.87□□□□□ -0.03
PTCD3-220ENST00000627371 RNF183Q96D59 192 aa14.87□□□□□ -0.03
PTCD3-220ENST00000627371 A0A1W2PPV4 95 aa14.86□□□□□ -0.03
PTCD3-220ENST00000627371 GIG44P09565 113 aaPredicted RBP14.86□□□□□ -0.03
PTCD3-220ENST00000627371 C4BPBP20851 252 aa14.86□□□□□ -0.03
PTCD3-220ENST00000627371 FAM122CQ6P4D5 195 aa14.86□□□□□ -0.03
PTCD3-220ENST00000627371 FXYD5Q96DB9 178 aa14.86□□□□□ -0.03
PTCD3-220ENST00000627371 ZNF503Q96F45 646 aa14.86□□□□□ -0.03
PTCD3-220ENST00000627371 A0A1B0GVG6 124 aa14.85□□□□□ -0.03
PTCD3-220ENST00000627371 KANTRA0A1W2PQU2 76 aa14.85□□□□□ -0.03
PTCD3-220ENST00000627371 A8MTW9 85 aa14.85□□□□□ -0.03
PTCD3-220ENST00000627371 BCL2L11O43521 198 aa14.85□□□□□ -0.03
PTCD3-220ENST00000627371 SPRY2O43597 315 aa14.85□□□□□ -0.03
PTCD3-220ENST00000627371 NDUFB4O95168 129 aa14.85□□□□□ -0.03
PTCD3-220ENST00000627371 C1QBP02746 253 aa14.85□□□□□ -0.03
PTCD3-220ENST00000627371 OR10J4P0C629 311 aa14.85□□□□□ -0.03
PTCD3-220ENST00000627371 NBEAP1P0C6P0 100 aa14.85□□□□□ -0.03
PTCD3-220ENST00000627371 CDC34P49427 236 aaPredicted RBP14.85□□□□□ -0.03
PTCD3-220ENST00000627371 NUTF2P61970 127 aaKnown RBP14.85□□□□□ -0.03
PTCD3-220ENST00000627371 RPP25LQ8N5L8 163 aaKnown RBP14.85□□□□□ -0.03
PTCD3-220ENST00000627371 OR4B1Q8NGF8 309 aa14.85□□□□□ -0.03
PTCD3-220ENST00000627371 BLNKQ8WV28 456 aa14.85□□□□□ -0.03
PTCD3-220ENST00000627371 RNF141Q8WVD5 230 aa14.85□□□□□ -0.03
PTCD3-220ENST00000627371 DUSP14O95147 198 aaKnown RBP14.84□□□□□ -0.03
PTCD3-220ENST00000627371 IGKV3-20P01619 116 aa14.84□□□□□ -0.03
PTCD3-220ENST00000627371 PSG9Q00887 426 aa14.84□□□□□ -0.03
PTCD3-220ENST00000627371 PQLC2Q6ZP29 291 aa14.84□□□□□ -0.03
PTCD3-220ENST00000627371 RPUSD4Q96CM3 377 aaKnown RBP14.84□□□□□ -0.03
PTCD3-220ENST00000627371 EIF3GO75821 320 aaKnown RBP eCLIP14.83□□□□□ -0.04
PTCD3-220ENST00000627371 CNN1P51911 297 aaKnown RBP14.83□□□□□ -0.04
PTCD3-220ENST00000627371 UBE2L3P68036 154 aaKnown RBP14.83□□□□□ -0.04
PTCD3-220ENST00000627371 TMUB2Q71RG4 321 aa14.83□□□□□ -0.04
PTCD3-220ENST00000627371 OR8A1Q8NGG7 326 aa14.83□□□□□ -0.04
PTCD3-220ENST00000627371 ZNF705FA8MVS1 300 aaPredicted RBP14.82□□□□□ -0.04
PTCD3-220ENST00000627371 MRPL53Q96EL3 112 aaKnown RBP14.82□□□□□ -0.04
PTCD3-220ENST00000627371 HYLS1Q96M11 299 aa14.82□□□□□ -0.04
PTCD3-220ENST00000627371 ZNF471Q9BX82 626 aaPredicted RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 115.2 ms