RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 SPAG8Q99932 426 aaPredicted RBP6.39□□□□□ -1.39
SGMS1-211ENST00000626236 OR51M1Q9H341 326 aa6.39□□□□□ -1.39
SGMS1-211ENST00000626236 NRN1Q9NPD7 142 aa6.39□□□□□ -1.39
SGMS1-211ENST00000626236 TMEM14CQ9P0S9 112 aa6.39□□□□□ -1.39
SGMS1-211ENST00000626236 A0A087X0K7 114 aa6.38□□□□□ -1.39
SGMS1-211ENST00000626236 A0A1B0GV50 99 aa6.38□□□□□ -1.39
SGMS1-211ENST00000626236 MAP1LC3B2A6NCE7 125 aa6.38□□□□□ -1.39
SGMS1-211ENST00000626236 OR4C46A6NHA9 309 aa6.38□□□□□ -1.39
SGMS1-211ENST00000626236 ZNF705EA8MWA4 302 aaPredicted RBP6.38□□□□□ -1.39
SGMS1-211ENST00000626236 H3BQ15 152 aa6.38□□□□□ -1.39
SGMS1-211ENST00000626236 CXorf1O96002 111 aa6.38□□□□□ -1.39
SGMS1-211ENST00000626236 H2AFB1P0C5Y9 115 aa6.38□□□□□ -1.39
SGMS1-211ENST00000626236 KRTAP10-11P60412 298 aa6.38□□□□□ -1.39
SGMS1-211ENST00000626236 PQLC2Q6ZP29 291 aa6.38□□□□□ -1.39
SGMS1-211ENST00000626236 IQCF2Q8IXL9 164 aa6.38□□□□□ -1.39
SGMS1-211ENST00000626236 LRRC20Q8TCA0 184 aa6.38□□□□□ -1.39
SGMS1-211ENST00000626236 DCANP1Q8TF63 244 aa6.38□□□□□ -1.39
SGMS1-211ENST00000626236 SFT2D1Q8WV19 159 aa6.38□□□□□ -1.39
SGMS1-211ENST00000626236 RNF141Q8WVD5 230 aa6.38□□□□□ -1.39
SGMS1-211ENST00000626236 FXYD5Q96DB9 178 aa6.38□□□□□ -1.39
SGMS1-211ENST00000626236 C16orf92Q96LL3 132 aa6.38□□□□□ -1.39
SGMS1-211ENST00000626236 C17orf77Q96MU5 243 aa6.38□□□□□ -1.39
SGMS1-211ENST00000626236 MAP1LC3BQ9GZQ8 125 aa6.38□□□□□ -1.39
SGMS1-211ENST00000626236 HRH4Q9H3N8 390 aa6.38□□□□□ -1.39
SGMS1-211ENST00000626236 ZNF586Q9NXT0 402 aa6.38□□□□□ -1.39
SGMS1-211ENST00000626236 DNAH3Q8TD57 4116 aa6.37□□□□□ -1.39
SGMS1-211ENST00000626236 TRBV19A0A075B6N1 114 aa6.37□□□□□ -1.39
SGMS1-211ENST00000626236 TRAV2A0A0B4J234 112 aa6.37□□□□□ -1.39
SGMS1-211ENST00000626236 K7EQG2 157 aa6.37□□□□□ -1.39
SGMS1-211ENST00000626236 SLC17A3O00476 420 aa6.37□□□□□ -1.39
SGMS1-211ENST00000626236 IFNA7P01567 189 aa6.37□□□□□ -1.39
SGMS1-211ENST00000626236 HIST1H1EP10412 219 aaKnown RBP6.37□□□□□ -1.39
SGMS1-211ENST00000626236 GCHFRP30047 84 aa6.37□□□□□ -1.39
SGMS1-211ENST00000626236 MEOX2P50222 304 aa6.37□□□□□ -1.39
SGMS1-211ENST00000626236 EGFEM1PQ0D2K5 195 aa6.37□□□□□ -1.39
SGMS1-211ENST00000626236 GUK1Q16774 197 aa6.37□□□□□ -1.39
SGMS1-211ENST00000626236 FAM24BQ8N5W8 94 aa6.37□□□□□ -1.39
SGMS1-211ENST00000626236 ZNF680Q8NEM1 530 aa6.37□□□□□ -1.39
SGMS1-211ENST00000626236 PRR25Q96S07 402 aa6.37□□□□□ -1.39
SGMS1-211ENST00000626236 TMPRSS5Q9H3S3 457 aa6.37□□□□□ -1.39
SGMS1-211ENST00000626236 ZMAT5Q9UDW3 170 aaKnown RBP6.37□□□□□ -1.39
SGMS1-211ENST00000626236 UBQLN2Q9UHD9 624 aa6.37□□□□□ -1.39
SGMS1-211ENST00000626236 ZNF256Q9Y2P7 627 aaPredicted RBP6.37□□□□□ -1.39
SGMS1-211ENST00000626236 LOC100996750A0A140TA64 210 aa6.36□□□□□ -1.39
SGMS1-211ENST00000626236 SOCS3O14543 225 aa6.36□□□□□ -1.39
SGMS1-211ENST00000626236 CD7P09564 240 aa6.36□□□□□ -1.39
SGMS1-211ENST00000626236 NBEAP1P0C6P0 100 aa6.36□□□□□ -1.39
SGMS1-211ENST00000626236 ZNF688P0C7X2 276 aa6.36□□□□□ -1.39
SGMS1-211ENST00000626236 ID1P41134 155 aa6.36□□□□□ -1.39
SGMS1-211ENST00000626236 CD81P60033 236 aa6.36□□□□□ -1.39
SGMS1-211ENST00000626236 SNRPD3P62318 126 aaKnown RBP6.36□□□□□ -1.39
SGMS1-211ENST00000626236 BEAN1Q3B7T3 259 aa6.36□□□□□ -1.39
SGMS1-211ENST00000626236 SAMD13Q5VXD3 122 aa6.36□□□□□ -1.39
SGMS1-211ENST00000626236 IGFL4Q6B9Z1 124 aa6.36□□□□□ -1.39
SGMS1-211ENST00000626236 GTSCR1Q86UQ5 136 aa6.36□□□□□ -1.39
SGMS1-211ENST00000626236 RNF182Q8N6D2 247 aa6.36□□□□□ -1.39
SGMS1-211ENST00000626236 MBD3L1Q8WWY6 194 aa6.36□□□□□ -1.39
SGMS1-211ENST00000626236 SAT2Q96F10 170 aaPredicted RBP6.36□□□□□ -1.39
SGMS1-211ENST00000626236 LINC00052Q96N35 136 aa6.36□□□□□ -1.39
SGMS1-211ENST00000626236 SLC50A1Q9BRV3 221 aa6.36□□□□□ -1.39
SGMS1-211ENST00000626236 KRTAP4-6Q9BYQ5 205 aa6.36□□□□□ -1.39
SGMS1-211ENST00000626236 MRPL18Q9H0U6 180 aaKnown RBP6.36□□□□□ -1.39
SGMS1-211ENST00000626236 TMEM167BQ9NRX6 74 aa6.36□□□□□ -1.39
SGMS1-211ENST00000626236 TRAV8-2A0A0B4J237 113 aa6.35□□□□□ -1.39
SGMS1-211ENST00000626236 TMEM238LA0A1B0GVL6 79 aa6.35□□□□□ -1.39
SGMS1-211ENST00000626236 TEX46H3BTG2 121 aa6.35□□□□□ -1.39
SGMS1-211ENST00000626236 ISLRO14498 428 aa6.35□□□□□ -1.39
SGMS1-211ENST00000626236 ZNF253O75346 499 aa6.35□□□□□ -1.39
SGMS1-211ENST00000626236 NDUFB4O95168 129 aa6.35□□□□□ -1.39
SGMS1-211ENST00000626236 HLA-DMBP28068 263 aa6.35□□□□□ -1.39
SGMS1-211ENST00000626236 PSMB3P49720 205 aa6.35□□□□□ -1.39
SGMS1-211ENST00000626236 RANP62826 216 aaKnown RBP6.35□□□□□ -1.39
SGMS1-211ENST00000626236 BLOC1S1P78537 153 aa6.35□□□□□ -1.39
SGMS1-211ENST00000626236 PSG9Q00887 426 aa6.35□□□□□ -1.39
SGMS1-211ENST00000626236 PDE6HQ13956 83 aa6.35□□□□□ -1.39
SGMS1-211ENST00000626236 ODF3L2Q3SX64 289 aa6.35□□□□□ -1.39
SGMS1-211ENST00000626236 PSMG4Q5JS54 123 aa6.35□□□□□ -1.39
SGMS1-211ENST00000626236 EXOC3-AS1Q8N2X6 119 aa6.35□□□□□ -1.39
SGMS1-211ENST00000626236 SUN5Q8TC36 379 aa6.35□□□□□ -1.39
SGMS1-211ENST00000626236 PCNPQ8WW12 178 aaKnown RBP6.35□□□□□ -1.39
SGMS1-211ENST00000626236 C20orf173Q96LM9 149 aa6.35□□□□□ -1.39
SGMS1-211ENST00000626236 MAP6D1Q9H9H5 199 aa6.35□□□□□ -1.39
SGMS1-211ENST00000626236 ZNF331Q9NQX6 463 aaPredicted RBP6.35□□□□□ -1.39
SGMS1-211ENST00000626236 OR11H12B2RN74 326 aa6.34□□□□□ -1.39
SGMS1-211ENST00000626236 HBE1P02100 147 aa6.34□□□□□ -1.39
SGMS1-211ENST00000626236 PRB4P10163 310 aaPredicted RBP6.34□□□□□ -1.39
SGMS1-211ENST00000626236 DEFB131AP59861 70 aa6.34□□□□□ -1.39
SGMS1-211ENST00000626236 UBE2G2P60604 165 aa6.34□□□□□ -1.39
SGMS1-211ENST00000626236 IFITM2Q01629 132 aa6.34□□□□□ -1.39
SGMS1-211ENST00000626236 ZNF124Q15973 351 aa6.34□□□□□ -1.39
SGMS1-211ENST00000626236 KPRPQ5T749 579 aaPredicted RBP6.34□□□□□ -1.39
SGMS1-211ENST00000626236 APRG1Q8IVJ8 170 aa6.34□□□□□ -1.39
SGMS1-211ENST00000626236 ZNF738Q8NE65 137 aa6.34□□□□□ -1.39
SGMS1-211ENST00000626236 WFDC10AQ9H1F0 79 aa6.34□□□□□ -1.39
SGMS1-211ENST00000626236 Q9H3A6 140 aa6.34□□□□□ -1.39
SGMS1-211ENST00000626236 AAMDCQ9H7C9 122 aa6.34□□□□□ -1.39
SGMS1-211ENST00000626236 TRAV1-1A0A0B4J248 108 aa6.33□□□□□ -1.4
SGMS1-211ENST00000626236 ZNF705FA8MVS1 300 aaPredicted RBP6.33□□□□□ -1.4
SGMS1-211ENST00000626236 PRB2P02812 416 aaPredicted RBP6.33□□□□□ -1.4
SGMS1-211ENST00000626236 CMC4P56277 68 aaPredicted RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms