RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 XCL2Q9UBD3 114 aa4.66□□□□□ -1.66
TCF4-249ENST00000625716 HLA-DRB4X5D2U9 266 aa4.66□□□□□ -1.66
TCF4-249ENST00000625716 FAM24AA6NFZ4 105 aa4.65□□□□□ -1.67
TCF4-249ENST00000625716 INMT-MINDY4F8WBC2 141 aa4.65□□□□□ -1.67
TCF4-249ENST00000625716 H3BRN7 92 aa4.65□□□□□ -1.67
TCF4-249ENST00000625716 AGPAT2O15120 278 aa4.65□□□□□ -1.67
TCF4-249ENST00000625716 DEFB4AO15263 64 aa4.65□□□□□ -1.67
TCF4-249ENST00000625716 COX7A2P2O60397 106 aa4.65□□□□□ -1.67
TCF4-249ENST00000625716 CST7O76096 145 aa4.65□□□□□ -1.67
TCF4-249ENST00000625716 C4BPBP20851 252 aa4.65□□□□□ -1.67
TCF4-249ENST00000625716 S100A11P31949 105 aa4.65□□□□□ -1.67
TCF4-249ENST00000625716 CAMLGP49069 296 aa4.65□□□□□ -1.67
TCF4-249ENST00000625716 SULT1A1P50225 295 aa4.65□□□□□ -1.67
TCF4-249ENST00000625716 PLP1P60201 277 aa4.65□□□□□ -1.67
TCF4-249ENST00000625716 CYCSP99999 105 aaKnown RBP4.65□□□□□ -1.67
TCF4-249ENST00000625716 EWSR1Q01844 656 aaKnown RBP eCLIP4.65□□□□□ -1.67
TCF4-249ENST00000625716 BAXQ07812 192 aa4.65□□□□□ -1.67
TCF4-249ENST00000625716 RAB32Q13637 225 aa4.65□□□□□ -1.67
TCF4-249ENST00000625716 C10orf113Q5VZT2 155 aa4.65□□□□□ -1.67
TCF4-249ENST00000625716 NRARPQ7Z6K4 114 aa4.65□□□□□ -1.67
TCF4-249ENST00000625716 SCRT1Q9BWW7 348 aa4.65□□□□□ -1.67
TCF4-249ENST00000625716 ARV1Q9H2C2 271 aa4.65□□□□□ -1.67
TCF4-249ENST00000625716 LYRM2Q9NU23 88 aaPredicted RBP4.65□□□□□ -1.67
TCF4-249ENST00000625716 UQCC1Q9NVA1 299 aa4.65□□□□□ -1.67
TCF4-249ENST00000625716 PPP1R14DQ9NXH3 145 aa4.65□□□□□ -1.67
TCF4-249ENST00000625716 STAB2Q8WWQ8 2551 aa4.64□□□□□ -1.67
TCF4-249ENST00000625716 IGHV3OR16-12A0A075B7B8 117 aa4.64□□□□□ -1.67
TCF4-249ENST00000625716 IGHV4-28A0A0C4DH34 117 aa4.64□□□□□ -1.67
TCF4-249ENST00000625716 SOCS3O14543 225 aa4.64□□□□□ -1.67
TCF4-249ENST00000625716 SSNA1O43805 119 aa4.64□□□□□ -1.67
TCF4-249ENST00000625716 DUSP14O95147 198 aaKnown RBP4.64□□□□□ -1.67
TCF4-249ENST00000625716 GIG44P09565 113 aaPredicted RBP4.64□□□□□ -1.67
TCF4-249ENST00000625716 PTTG1IPP53801 180 aa4.64□□□□□ -1.67
TCF4-249ENST00000625716 FXYD7P58549 80 aa4.64□□□□□ -1.67
TCF4-249ENST00000625716 NANOS2P60321 138 aaKnown RBP4.64□□□□□ -1.67
TCF4-249ENST00000625716 PSG9Q00887 426 aa4.64□□□□□ -1.67
TCF4-249ENST00000625716 ARL16Q0P5N6 197 aa4.64□□□□□ -1.67
TCF4-249ENST00000625716 ATP6V1FQ16864 119 aa4.64□□□□□ -1.67
TCF4-249ENST00000625716 GDF5OSQ5U4N7 250 aa4.64□□□□□ -1.67
TCF4-249ENST00000625716 FAM78BQ5VT40 261 aa4.64□□□□□ -1.67
TCF4-249ENST00000625716 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.64□□□□□ -1.67
TCF4-249ENST00000625716 LINC00305Q7Z4B0 112 aa4.64□□□□□ -1.67
TCF4-249ENST00000625716 BPIFA4PQ86YQ2 179 aa4.64□□□□□ -1.67
TCF4-249ENST00000625716 OR1L4Q8NGR5 311 aa4.64□□□□□ -1.67
TCF4-249ENST00000625716 PHLDA1Q8WV24 401 aaPredicted RBP4.64□□□□□ -1.67
TCF4-249ENST00000625716 UHRF2Q96PU4 802 aa4.64□□□□□ -1.67
TCF4-249ENST00000625716 MGST2Q99735 147 aa4.64□□□□□ -1.67
TCF4-249ENST00000625716 SLC25A31Q9H0C2 315 aa4.64□□□□□ -1.67
TCF4-249ENST00000625716 DNAJC4Q9NNZ3 241 aa4.64□□□□□ -1.67
TCF4-249ENST00000625716 GOLT1BQ9Y3E0 138 aa4.64□□□□□ -1.67
TCF4-249ENST00000625716 A0A0J9YX75 114 aa4.63□□□□□ -1.67
TCF4-249ENST00000625716 UBE2L5PA0A1B0GUS4 154 aa4.63□□□□□ -1.67
TCF4-249ENST00000625716 TMEM189A5PLL7 270 aa4.63□□□□□ -1.67
TCF4-249ENST00000625716 SMIM9A6NGZ8 99 aa4.63□□□□□ -1.67
TCF4-249ENST00000625716 ZNF705EA8MWA4 302 aaPredicted RBP4.63□□□□□ -1.67
TCF4-249ENST00000625716 C11orf94C9JXX5 98 aa4.63□□□□□ -1.67
TCF4-249ENST00000625716 E5RGE8 158 aa4.63□□□□□ -1.67
TCF4-249ENST00000625716 F6UB75 175 aa4.63□□□□□ -1.67
TCF4-249ENST00000625716 SIX6O95475 246 aa4.63□□□□□ -1.67
TCF4-249ENST00000625716 LY6G6CO95867 125 aa4.63□□□□□ -1.67
TCF4-249ENST00000625716 FGF7P21781 194 aa4.63□□□□□ -1.67
TCF4-249ENST00000625716 DEFB1P60022 68 aa4.63□□□□□ -1.67
TCF4-249ENST00000625716 RHOBP62745 196 aa4.63□□□□□ -1.67
TCF4-249ENST00000625716 IFITM3Q01628 133 aa4.63□□□□□ -1.67
TCF4-249ENST00000625716 LRRC37A5PQ49AS3 106 aa4.63□□□□□ -1.67
TCF4-249ENST00000625716 PATE2Q6UY27 113 aa4.63□□□□□ -1.67
TCF4-249ENST00000625716 TMEM252Q8N6L7 170 aa4.63□□□□□ -1.67
TCF4-249ENST00000625716 Q8NAQ8 132 aa4.63□□□□□ -1.67
TCF4-249ENST00000625716 CSNK1G2-AS1Q8NCQ2 148 aa4.63□□□□□ -1.67
TCF4-249ENST00000625716 ZNF738Q8NE65 137 aa4.63□□□□□ -1.67
TCF4-249ENST00000625716 C2CD4CQ8TF44 421 aa4.63□□□□□ -1.67
TCF4-249ENST00000625716 PFDN5Q99471 154 aa4.63□□□□□ -1.67
TCF4-249ENST00000625716 MARVELD1Q9BSK0 173 aa4.63□□□□□ -1.67
TCF4-249ENST00000625716 TMEM208Q9BTX3 173 aa4.63□□□□□ -1.67
TCF4-249ENST00000625716 NMES1Q9C002 83 aa4.63□□□□□ -1.67
TCF4-249ENST00000625716 HRH4Q9H3N8 390 aa4.63□□□□□ -1.67
TCF4-249ENST00000625716 A0A087X0K7 114 aa4.62□□□□□ -1.67
TCF4-249ENST00000625716 IGSF23A1L1A6 192 aa4.62□□□□□ -1.67
TCF4-249ENST00000625716 MPDU1O75352 247 aa4.62□□□□□ -1.67
TCF4-249ENST00000625716 HBE1P02100 147 aa4.62□□□□□ -1.67
TCF4-249ENST00000625716 AMBPP02760 352 aa4.62□□□□□ -1.67
TCF4-249ENST00000625716 PET100P0DJ07 73 aa4.62□□□□□ -1.67
TCF4-249ENST00000625716 RBMY1A1P0DJD3 496 aaKnown RBP4.62□□□□□ -1.67
TCF4-249ENST00000625716 RBMY1CP0DJD4 496 aa4.62□□□□□ -1.67
TCF4-249ENST00000625716 CXCL2P19875 107 aa4.62□□□□□ -1.67
TCF4-249ENST00000625716 HLA-DMBP28068 263 aa4.62□□□□□ -1.67
TCF4-249ENST00000625716 RPL29P47914 159 aaKnown RBP4.62□□□□□ -1.67
TCF4-249ENST00000625716 EMP1P54849 157 aa4.62□□□□□ -1.67
TCF4-249ENST00000625716 B2MP61769 119 aa4.62□□□□□ -1.67
TCF4-249ENST00000625716 HIST1H1AQ02539 215 aaPredicted RBP4.62□□□□□ -1.67
TCF4-249ENST00000625716 IL15RAQ13261 267 aa4.62□□□□□ -1.67
TCF4-249ENST00000625716 RBMY1FQ15415 496 aaKnown RBP4.62□□□□□ -1.67
TCF4-249ENST00000625716 PSG3Q16557 428 aa4.62□□□□□ -1.67
TCF4-249ENST00000625716 VWC2Q2TAL6 325 aa4.62□□□□□ -1.67
TCF4-249ENST00000625716 GAGE13Q4V321 117 aa4.62□□□□□ -1.67
TCF4-249ENST00000625716 MIC13Q5XKP0 118 aa4.62□□□□□ -1.67
TCF4-249ENST00000625716 LCN15Q6UWW0 184 aa4.62□□□□□ -1.67
TCF4-249ENST00000625716 RNF182Q8N6D2 247 aa4.62□□□□□ -1.67
TCF4-249ENST00000625716 ZNF709Q8N972 641 aa4.62□□□□□ -1.67
TCF4-249ENST00000625716 OR5C1Q8NGR4 320 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms