RNA–Protein interactions for RNA: ENST00000624071.1

LINC01006-208, Transcript of long intergenic non-protein coding RNA 1006, human

Gene LINC01006, Length 651 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01006-208	ENST00000624071	ATP5S	Q99766	215 aa		13.85	□□□□□ -0.19
LINC01006-208	ENST00000624071	WDR61	Q9GZS3	305 aa	Known RBP	13.85	□□□□□ -0.19
LINC01006-208	ENST00000624071	PMS2P11	Q13670	270 aa		13.84	□□□□□ -0.19
LINC01006-208	ENST00000624071	ZNF709	Q8N972	641 aa		13.84	□□□□□ -0.19
LINC01006-208	ENST00000624071	CSNK1G2-AS1	Q8NCQ2	148 aa		13.84	□□□□□ -0.19
LINC01006-208	ENST00000624071	SLC35B3	Q9H1N7	401 aa		13.84	□□□□□ -0.19
LINC01006-208	ENST00000624071	DNAH7	Q8WXX0	4024 aa		13.84	□□□□□ -0.19
LINC01006-208	ENST00000624071		H3BQ15	152 aa		13.83	□□□□□ -0.2
LINC01006-208	ENST00000624071	SPATA31B1P	Q5VZV4	182 aa		13.83	□□□□□ -0.2
LINC01006-208	ENST00000624071	C1QTNF4	Q9BXJ3	329 aa		13.83	□□□□□ -0.2
LINC01006-208	ENST00000624071	PSG9	Q00887	426 aa		13.82	□□□□□ -0.2
LINC01006-208	ENST00000624071	OXA1L	Q15070	435 aa		13.82	□□□□□ -0.2
LINC01006-208	ENST00000624071	PSG3	Q16557	428 aa		13.82	□□□□□ -0.2
LINC01006-208	ENST00000624071	WFDC1	Q9HC57	220 aa		13.82	□□□□□ -0.2
LINC01006-208	ENST00000624071		X6R8D5	127 aa		13.82	□□□□□ -0.2
LINC01006-208	ENST00000624071	KMT2C	Q8NEZ4	4911 aa	Known RBP	13.81	□□□□□ -0.2
LINC01006-208	ENST00000624071	IGHV4-28	A0A0C4DH34	117 aa		13.81	□□□□□ -0.2
LINC01006-208	ENST00000624071	CXorf65	A6NEN9	183 aa		13.81	□□□□□ -0.2
LINC01006-208	ENST00000624071	SLC17A3	O00476	420 aa		13.81	□□□□□ -0.2
LINC01006-208	ENST00000624071	IFNA5	P01569	189 aa		13.81	□□□□□ -0.2
LINC01006-208	ENST00000624071	IGLC2	P0DOY2	106 aa		13.81	□□□□□ -0.2
LINC01006-208	ENST00000624071	CNN1	P51911	297 aa	Known RBP	13.81	□□□□□ -0.2
LINC01006-208	ENST00000624071		Q5BKY6	102 aa		13.81	□□□□□ -0.2
LINC01006-208	ENST00000624071	LCN15	Q6UWW0	184 aa		13.81	□□□□□ -0.2
LINC01006-208	ENST00000624071	SCGB1C1	Q8TD33	95 aa		13.81	□□□□□ -0.2
LINC01006-208	ENST00000624071	MFF	Q9GZY8	342 aa		13.81	□□□□□ -0.2
LINC01006-208	ENST00000624071	ZNF331	Q9NQX6	463 aa	Predicted RBP	13.81	□□□□□ -0.2
LINC01006-208	ENST00000624071	ZNF705E	A8MWA4	302 aa	Predicted RBP	13.8	□□□□□ -0.2
LINC01006-208	ENST00000624071	C17orf112	F2Z3M2	114 aa		13.8	□□□□□ -0.2
LINC01006-208	ENST00000624071	MIR17HG	Q75NE6	70 aa		13.8	□□□□□ -0.2
LINC01006-208	ENST00000624071		Q8NAQ8	132 aa		13.8	□□□□□ -0.2
LINC01006-208	ENST00000624071	CLUHP3	Q96NS8	147 aa		13.8	□□□□□ -0.2
LINC01006-208	ENST00000624071	IGHV3OR16-12	A0A075B7B8	117 aa		13.79	□□□□□ -0.2
LINC01006-208	ENST00000624071	ZNF705F	A8MVS1	300 aa	Predicted RBP	13.79	□□□□□ -0.2
LINC01006-208	ENST00000624071	DUSP14	O95147	198 aa	Known RBP	13.79	□□□□□ -0.2
LINC01006-208	ENST00000624071	GIP	P09681	153 aa	Predicted RBP	13.79	□□□□□ -0.2
LINC01006-208	ENST00000624071	RBMY1A1	P0DJD3	496 aa	Known RBP	13.79	□□□□□ -0.2
LINC01006-208	ENST00000624071	RBMY1C	P0DJD4	496 aa		13.79	□□□□□ -0.2
LINC01006-208	ENST00000624071	CXCL2	P19875	107 aa		13.79	□□□□□ -0.2
LINC01006-208	ENST00000624071	HIST1H1A	Q02539	215 aa	Predicted RBP	13.79	□□□□□ -0.2
LINC01006-208	ENST00000624071	RBMY1F	Q15415	496 aa	Known RBP	13.79	□□□□□ -0.2
LINC01006-208	ENST00000624071	RPUSD4	Q96CM3	377 aa	Known RBP	13.79	□□□□□ -0.2
LINC01006-208	ENST00000624071	SLC50A1	Q9BRV3	221 aa		13.79	□□□□□ -0.2
LINC01006-208	ENST00000624071	C11orf68	Q9H3H3	251 aa	Known RBP	13.79	□□□□□ -0.2
LINC01006-208	ENST00000624071	HRH4	Q9H3N8	390 aa		13.79	□□□□□ -0.2
LINC01006-208	ENST00000624071	KCNIP2	Q9NS61	270 aa		13.79	□□□□□ -0.2
LINC01006-208	ENST00000624071	ZNF586	Q9NXT0	402 aa		13.79	□□□□□ -0.2
LINC01006-208	ENST00000624071	RFNG	Q9Y644	331 aa		13.79	□□□□□ -0.2
LINC01006-208	ENST00000624071	PYY	P10082	97 aa		13.78	□□□□□ -0.2
LINC01006-208	ENST00000624071	MIF	P14174	115 aa		13.78	□□□□□ -0.2
LINC01006-208	ENST00000624071	NANOS2	P60321	138 aa	Known RBP	13.78	□□□□□ -0.2
LINC01006-208	ENST00000624071	AMTN	Q6UX39	209 aa		13.78	□□□□□ -0.2
LINC01006-208	ENST00000624071	OR8A1	Q8NGG7	326 aa		13.78	□□□□□ -0.2
LINC01006-208	ENST00000624071	SAT2	Q96F10	170 aa	Predicted RBP	13.78	□□□□□ -0.2
LINC01006-208	ENST00000624071	STARD9	Q9P2P6	4700 aa		13.78	□□□□□ -0.2
LINC01006-208	ENST00000624071	RHOB	P62745	196 aa		13.77	□□□□□ -0.21
LINC01006-208	ENST00000624071	FFAR4	Q5NUL3	377 aa		13.77	□□□□□ -0.21
LINC01006-208	ENST00000624071	C11orf45	Q8TAV5	145 aa		13.77	□□□□□ -0.21
LINC01006-208	ENST00000624071	SLC25A2	Q9BXI2	301 aa		13.77	□□□□□ -0.21
LINC01006-208	ENST00000624071		A8MTW9	85 aa		13.76	□□□□□ -0.21
LINC01006-208	ENST00000624071	PRAC2	D3DTV9	90 aa		13.76	□□□□□ -0.21
LINC01006-208	ENST00000624071		M0R2Z0	102 aa		13.76	□□□□□ -0.21
LINC01006-208	ENST00000624071	GUK1	Q16774	197 aa		13.76	□□□□□ -0.21
LINC01006-208	ENST00000624071	SPINK13	Q1W4C9	94 aa		13.76	□□□□□ -0.21
LINC01006-208	ENST00000624071	BLNK	Q8WV28	456 aa		13.76	□□□□□ -0.21
LINC01006-208	ENST00000624071	FAM167A-AS1	Q96KT0	104 aa		13.76	□□□□□ -0.21
LINC01006-208	ENST00000624071	TMEM14C	Q9P0S9	112 aa		13.76	□□□□□ -0.21
LINC01006-208	ENST00000624071	EIF3G	O75821	320 aa	Known RBP eCLIP	13.75	□□□□□ -0.21
LINC01006-208	ENST00000624071	HIST1H1E	P10412	219 aa	Known RBP	13.75	□□□□□ -0.21
LINC01006-208	ENST00000624071	ZNF705A	Q6ZN79	300 aa	Predicted RBP	13.75	□□□□□ -0.21
LINC01006-208	ENST00000624071	C1orf158	Q8N1D5	194 aa		13.75	□□□□□ -0.21
LINC01006-208	ENST00000624071	AQP10	Q96PS8	301 aa		13.75	□□□□□ -0.21
LINC01006-208	ENST00000624071	PPP1R14D	Q9NXH3	145 aa		13.75	□□□□□ -0.21
LINC01006-208	ENST00000624071	FUT9	Q9Y231	359 aa		13.75	□□□□□ -0.21
LINC01006-208	ENST00000624071	TRBV19	A0A075B6N1	114 aa		13.74	□□□□□ -0.21
LINC01006-208	ENST00000624071	FXYD6-FXYD2	A0A087WZ82	144 aa		13.74	□□□□□ -0.21
LINC01006-208	ENST00000624071	OR2T35	Q8NGX2	323 aa		13.74	□□□□□ -0.21
LINC01006-208	ENST00000624071	ASB13	Q8WXK3	278 aa		13.74	□□□□□ -0.21
LINC01006-208	ENST00000624071	MRPL32	Q9BYC8	188 aa	Known RBP	13.74	□□□□□ -0.21
LINC01006-208	ENST00000624071	GOLT1B	Q9Y3E0	138 aa		13.74	□□□□□ -0.21
LINC01006-208	ENST00000624071	TIMM9	Q9Y5J7	89 aa		13.74	□□□□□ -0.21
LINC01006-208	ENST00000624071	BOLA2-SMG1P6	H3BVE0	249 aa		13.73	□□□□□ -0.21
LINC01006-208	ENST00000624071	NDUFB4	O95168	129 aa		13.73	□□□□□ -0.21
LINC01006-208	ENST00000624071	CEMP1	Q6PRD7	247 aa	Predicted RBP	13.73	□□□□□ -0.21
LINC01006-208	ENST00000624071	BAP18	Q8IXM2	172 aa		13.73	□□□□□ -0.21
LINC01006-208	ENST00000624071	IGF2BP2-AS1	Q96M15	143 aa		13.73	□□□□□ -0.21
LINC01006-208	ENST00000624071	PARD6G	Q9BYG4	376 aa	Predicted RBP	13.73	□□□□□ -0.21
LINC01006-208	ENST00000624071	OR51M1	Q9H341	326 aa		13.73	□□□□□ -0.21
LINC01006-208	ENST00000624071	TRAV12-2	A0A075B6T6	113 aa		13.72	□□□□□ -0.21
LINC01006-208	ENST00000624071		M0R3E3	92 aa		13.72	□□□□□ -0.21
LINC01006-208	ENST00000624071	CRX	O43186	299 aa	Predicted RBP	13.72	□□□□□ -0.21
LINC01006-208	ENST00000624071	OR10J4	P0C629	311 aa		13.72	□□□□□ -0.21
LINC01006-208	ENST00000624071	EMP1	P54849	157 aa		13.72	□□□□□ -0.21
LINC01006-208	ENST00000624071	EXOC3-AS1	Q8N2X6	119 aa		13.72	□□□□□ -0.21
LINC01006-208	ENST00000624071	OR10J6P	Q8NGY7	276 aa		13.72	□□□□□ -0.21
LINC01006-208	ENST00000624071	PHLDA1	Q8WV24	401 aa	Predicted RBP	13.72	□□□□□ -0.21
LINC01006-208	ENST00000624071	TMEM208	Q9BTX3	173 aa		13.72	□□□□□ -0.21
LINC01006-208	ENST00000624071	PAXX	Q9BUH6	204 aa		13.72	□□□□□ -0.21
LINC01006-208	ENST00000624071	OR7C2	O60412	319 aa		13.71	□□□□□ -0.21
LINC01006-208	ENST00000624071	ZNF253	O75346	499 aa		13.71	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 1701 ms