RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 RHEBQ15382 184 aa1.98□□□□□ -2.09
CPNE3-213ENST00000622183 KRTAP13-4Q3LI77 160 aa1.98□□□□□ -2.09
CPNE3-213ENST00000622183 SCGB2B2Q4G0G5 96 aa1.98□□□□□ -2.09
CPNE3-213ENST00000622183 CCSMST1Q4G0I0 132 aa1.98□□□□□ -2.09
CPNE3-213ENST00000622183 GLYATL3Q5SZD4 288 aa1.98□□□□□ -2.09
CPNE3-213ENST00000622183 ZNF705AQ6ZN79 300 aaPredicted RBP1.98□□□□□ -2.09
CPNE3-213ENST00000622183 DYNAPQ8N1N2 210 aa1.98□□□□□ -2.09
CPNE3-213ENST00000622183 ANKRD29Q8N6D5 301 aa1.98□□□□□ -2.09
CPNE3-213ENST00000622183 TSPAN32Q96QS1 320 aa1.98□□□□□ -2.09
CPNE3-213ENST00000622183 TIMM21Q9BVV7 248 aa1.98□□□□□ -2.09
CPNE3-213ENST00000622183 POPDC3Q9HBV1 291 aa1.98□□□□□ -2.09
CPNE3-213ENST00000622183 PRTFDC1Q9NRG1 225 aa1.98□□□□□ -2.09
CPNE3-213ENST00000622183 NAT8Q9UHE5 227 aa1.98□□□□□ -2.09
CPNE3-213ENST00000622183 BOKQ9UMX3 212 aaPredicted RBP1.98□□□□□ -2.09
CPNE3-213ENST00000622183 FUT9Q9Y231 359 aa1.98□□□□□ -2.09
CPNE3-213ENST00000622183 LAMTOR2Q9Y2Q5 125 aa1.98□□□□□ -2.09
CPNE3-213ENST00000622183 PXDNQ92626 1479 aa1.98□□□□□ -2.09
CPNE3-213ENST00000622183 TET3O43151 1660 aa1.98□□□□□ -2.09
CPNE3-213ENST00000622183 ABCC5O15440 1437 aa1.98□□□□□ -2.09
CPNE3-213ENST00000622183 PLXNC1O60486 1568 aa1.98□□□□□ -2.09
CPNE3-213ENST00000622183 SETBP1Q9Y6X0 1596 aa1.98□□□□□ -2.09
CPNE3-213ENST00000622183 URB2Q14146 1524 aaKnown RBP1.97□□□□□ -2.09
CPNE3-213ENST00000622183 ATG2BQ96BY7 2078 aa1.97□□□□□ -2.09
CPNE3-213ENST00000622183 MYO16Q9Y6X6 1858 aa1.97□□□□□ -2.09
CPNE3-213ENST00000622183 NCOA2Q15596 1464 aa1.97□□□□□ -2.09
CPNE3-213ENST00000622183 PRXQ9BXM0 1461 aa1.97□□□□□ -2.09
CPNE3-213ENST00000622183 TRBV20OR9-2A0A075B6H5 130 aa1.97□□□□□ -2.09
CPNE3-213ENST00000622183 DUXBA0A1W2PPF3 345 aa1.97□□□□□ -2.09
CPNE3-213ENST00000622183 ZNF705FA8MVS1 300 aaPredicted RBP1.97□□□□□ -2.09
CPNE3-213ENST00000622183 GNG7O60262 68 aa1.97□□□□□ -2.09
CPNE3-213ENST00000622183 NCR2O95944 276 aa1.97□□□□□ -2.09
CPNE3-213ENST00000622183 SERPINE1P05121 402 aa1.97□□□□□ -2.09
CPNE3-213ENST00000622183 HIST1H1DP16402 221 aaKnown RBP1.97□□□□□ -2.09
CPNE3-213ENST00000622183 GLRXP35754 106 aa1.97□□□□□ -2.09
CPNE3-213ENST00000622183 TMEM258P61165 79 aa1.97□□□□□ -2.09
CPNE3-213ENST00000622183 RPS25P62851 125 aaKnown RBP1.97□□□□□ -2.09
CPNE3-213ENST00000622183 RPL22L1Q6P5R6 122 aaKnown RBP1.97□□□□□ -2.09
CPNE3-213ENST00000622183 GOLT1AQ6ZVE7 132 aa1.97□□□□□ -2.09
CPNE3-213ENST00000622183 SNX29P2Q8IUI4 249 aa1.97□□□□□ -2.09
CPNE3-213ENST00000622183 TCTEX1D1Q8N7M0 179 aa1.97□□□□□ -2.09
CPNE3-213ENST00000622183 NUP35Q8NFH5 326 aa1.97□□□□□ -2.09
CPNE3-213ENST00000622183 OR51A2Q8NGJ7 313 aa1.97□□□□□ -2.09
CPNE3-213ENST00000622183 MBD3L1Q8WWY6 194 aa1.97□□□□□ -2.09
CPNE3-213ENST00000622183 TEX37Q96LM6 180 aa1.97□□□□□ -2.09
CPNE3-213ENST00000622183 HYLS1Q96M11 299 aa1.97□□□□□ -2.09
CPNE3-213ENST00000622183 TP53RKQ96S44 253 aa1.97□□□□□ -2.09
CPNE3-213ENST00000622183 TMEM70Q9BUB7 260 aa1.97□□□□□ -2.09
CPNE3-213ENST00000622183 PBOV1Q9GZY1 135 aa1.97□□□□□ -2.09
CPNE3-213ENST00000622183 RNASE7Q9H1E1 156 aaKnown RBP1.97□□□□□ -2.09
CPNE3-213ENST00000622183 SAR1AQ9NR31 198 aa1.97□□□□□ -2.09
CPNE3-213ENST00000622183 CISHQ9NSE2 258 aa1.97□□□□□ -2.09
CPNE3-213ENST00000622183 BLMP54132 1417 aaPredicted RBP1.97□□□□□ -2.09
CPNE3-213ENST00000622183 MYH8P13535 1937 aa1.97□□□□□ -2.09
CPNE3-213ENST00000622183 TCHHQ07283 1943 aa1.97□□□□□ -2.09
CPNE3-213ENST00000622183 IQGAP2Q13576 1575 aa1.97□□□□□ -2.09
CPNE3-213ENST00000622183 DIP2BQ9P265 1576 aa1.97□□□□□ -2.09
CPNE3-213ENST00000622183 ATP10BO94823 1461 aa1.96□□□□□ -2.1
CPNE3-213ENST00000622183 CDK12Q9NYV4 1490 aaPredicted RBP1.96□□□□□ -2.1
CPNE3-213ENST00000622183 MADDQ8WXG6 1647 aa1.96□□□□□ -2.1
CPNE3-213ENST00000622183 HELZP42694 1942 aaKnown RBP1.96□□□□□ -2.1
CPNE3-213ENST00000622183 IGHV1-18A0A0C4DH31 117 aa1.96□□□□□ -2.1
CPNE3-213ENST00000622183 H7C2G1 150 aa1.96□□□□□ -2.1
CPNE3-213ENST00000622183 J3QKU1 62 aa1.96□□□□□ -2.1
CPNE3-213ENST00000622183 MPC2O95563 127 aa1.96□□□□□ -2.1
CPNE3-213ENST00000622183 C1QAP02745 245 aa1.96□□□□□ -2.1
CPNE3-213ENST00000622183 IGKV1-16P04430 117 aa1.96□□□□□ -2.1
CPNE3-213ENST00000622183 CSN2P05814 226 aa1.96□□□□□ -2.1
CPNE3-213ENST00000622183 TMBIM6P55061 237 aa1.96□□□□□ -2.1
CPNE3-213ENST00000622183 SNRPD2P62316 118 aaKnown RBP1.96□□□□□ -2.1
CPNE3-213ENST00000622183 Q6Q795 121 aa1.96□□□□□ -2.1
CPNE3-213ENST00000622183 ARPINQ7Z6K5 226 aa1.96□□□□□ -2.1
CPNE3-213ENST00000622183 RPP25LQ8N5L8 163 aaKnown RBP1.96□□□□□ -2.1
CPNE3-213ENST00000622183 FAM24BQ8N5W8 94 aa1.96□□□□□ -2.1
CPNE3-213ENST00000622183 OR4S1Q8NGB4 309 aa1.96□□□□□ -2.1
CPNE3-213ENST00000622183 OR52R1Q8NGF1 315 aa1.96□□□□□ -2.1
CPNE3-213ENST00000622183 PP6455Q8WZ26 134 aa1.96□□□□□ -2.1
CPNE3-213ENST00000622183 ISOC1Q96CN7 298 aa1.96□□□□□ -2.1
CPNE3-213ENST00000622183 ERMAPQ96PL5 475 aaPredicted RBP1.96□□□□□ -2.1
CPNE3-213ENST00000622183 LYSMD1Q96S90 227 aa1.96□□□□□ -2.1
CPNE3-213ENST00000622183 MRPL57Q9BQC6 102 aaKnown RBP1.96□□□□□ -2.1
CPNE3-213ENST00000622183 TMEM147Q9BVK8 224 aa1.96□□□□□ -2.1
CPNE3-213ENST00000622183 SPANXDQ9BXN6 97 aa1.96□□□□□ -2.1
CPNE3-213ENST00000622183 MRPL32Q9BYC8 188 aaKnown RBP1.96□□□□□ -2.1
CPNE3-213ENST00000622183 OR8D2Q9GZM6 311 aa1.96□□□□□ -2.1
CPNE3-213ENST00000622183 C20orf27Q9GZN8 174 aa1.96□□□□□ -2.1
CPNE3-213ENST00000622183 RPRMQ9NS64 109 aa1.96□□□□□ -2.1
CPNE3-213ENST00000622183 TNFSF18Q9UNG2 199 aa1.96□□□□□ -2.1
CPNE3-213ENST00000622183 AP4S1Q9Y587 144 aa1.96□□□□□ -2.1
CPNE3-213ENST00000622183 IER3IP1Q9Y5U9 82 aa1.96□□□□□ -2.1
CPNE3-213ENST00000622183 HECW2Q9P2P5 1572 aa1.96□□□□□ -2.1
CPNE3-213ENST00000622183 SPHKAPQ2M3C7 1700 aa1.96□□□□□ -2.1
CPNE3-213ENST00000622183 IFT172Q9UG01 1749 aa1.96□□□□□ -2.1
CPNE3-213ENST00000622183 ANKRD31Q8N7Z5 1873 aa1.96□□□□□ -2.1
CPNE3-213ENST00000622183 BTAF1O14981 1849 aa1.96□□□□□ -2.1
CPNE3-213ENST00000622183 ALPK3Q96L96 1907 aa1.95□□□□□ -2.1
CPNE3-213ENST00000622183 FER1L6Q2WGJ9 1857 aa1.95□□□□□ -2.1
CPNE3-213ENST00000622183 ITSN1Q15811 1721 aa1.95□□□□□ -2.1
CPNE3-213ENST00000622183 CFAP74Q9C0B2 1584 aa1.95□□□□□ -2.1
CPNE3-213ENST00000622183 TRAV26-2A0A0B4J265 109 aa1.95□□□□□ -2.1
CPNE3-213ENST00000622183 PNMA8CA0A1B0GUJ8 204 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms