RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 CD28P10747 220 aa14.28□□□□□ -0.12
SEMA6C-210ENST00000621728 GALR1P47211 349 aa14.28□□□□□ -0.12
SEMA6C-210ENST00000621728 SSTP61278 116 aa14.28□□□□□ -0.12
SEMA6C-210ENST00000621728 RELQ04864 619 aaPredicted RBP14.28□□□□□ -0.12
SEMA6C-210ENST00000621728 KCNIP4Q6PIL6 250 aa14.28□□□□□ -0.12
SEMA6C-210ENST00000621728 UBE2E2Q96LR5 201 aa14.28□□□□□ -0.12
SEMA6C-210ENST00000621728 TMEM167BQ9NRX6 74 aa14.28□□□□□ -0.12
SEMA6C-210ENST00000621728 C2CD3Q4AC94 2353 aa14.28□□□□□ -0.12
SEMA6C-210ENST00000621728 IGHV3-49A0A0A0MS15 119 aa14.27□□□□□ -0.12
SEMA6C-210ENST00000621728 HIST1H2BKO60814 126 aa14.27□□□□□ -0.12
SEMA6C-210ENST00000621728 HIST1H2BJP06899 126 aa14.27□□□□□ -0.12
SEMA6C-210ENST00000621728 LGALS1P09382 135 aaKnown RBP14.27□□□□□ -0.12
SEMA6C-210ENST00000621728 HIST1H2BOP23527 126 aa14.27□□□□□ -0.12
SEMA6C-210ENST00000621728 HIST1H2BBP33778 126 aa14.27□□□□□ -0.12
SEMA6C-210ENST00000621728 HIST1H2BDP58876 126 aa14.27□□□□□ -0.12
SEMA6C-210ENST00000621728 TAS2R45P59539 299 aa14.27□□□□□ -0.12
SEMA6C-210ENST00000621728 HIST1H2BCP62807 126 aa14.27□□□□□ -0.12
SEMA6C-210ENST00000621728 HIST2H2BEQ16778 126 aa14.27□□□□□ -0.12
SEMA6C-210ENST00000621728 DEFB136Q30KP8 78 aa14.27□□□□□ -0.12
SEMA6C-210ENST00000621728 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.27□□□□□ -0.12
SEMA6C-210ENST00000621728 HIST1H2BHQ93079 126 aa14.27□□□□□ -0.12
SEMA6C-210ENST00000621728 HIST1H2BNQ99877 126 aa14.27□□□□□ -0.12
SEMA6C-210ENST00000621728 HIST1H2BMQ99879 126 aa14.27□□□□□ -0.12
SEMA6C-210ENST00000621728 SHANK2-AS3Q9BTD1 123 aa14.27□□□□□ -0.12
SEMA6C-210ENST00000621728 LY96Q9Y6Y9 160 aa14.27□□□□□ -0.12
SEMA6C-210ENST00000621728 IGHV3OR16-13A0A075B7E8 117 aa14.27□□□□□ -0.13
SEMA6C-210ENST00000621728 IGHV3-74A0A0B4J1X5 117 aa14.27□□□□□ -0.13
SEMA6C-210ENST00000621728 TRGC2P03986 189 aa14.27□□□□□ -0.13
SEMA6C-210ENST00000621728 C11orf52Q96A22 123 aa14.27□□□□□ -0.13
SEMA6C-210ENST00000621728 RABAC1Q9UI14 185 aa14.27□□□□□ -0.13
SEMA6C-210ENST00000621728 IGHV4OR15-8A0A075B7B6 117 aa14.26□□□□□ -0.13
SEMA6C-210ENST00000621728 A0A087WW49 117 aa14.26□□□□□ -0.13
SEMA6C-210ENST00000621728 IGHV3-66A0A0C4DH42 116 aa14.26□□□□□ -0.13
SEMA6C-210ENST00000621728 H3BTX0 84 aa14.26□□□□□ -0.13
SEMA6C-210ENST00000621728 GGCTO75223 188 aaKnown RBP14.26□□□□□ -0.13
SEMA6C-210ENST00000621728 APOHP02749 345 aaPredicted RBP14.26□□□□□ -0.13
SEMA6C-210ENST00000621728 TYMSP04818 313 aa14.26□□□□□ -0.13
SEMA6C-210ENST00000621728 NPPCP23582 126 aa14.26□□□□□ -0.13
SEMA6C-210ENST00000621728 FAM3BP58499 235 aaPredicted RBP14.26□□□□□ -0.13
SEMA6C-210ENST00000621728 LINC01551Q86U37 167 aa14.26□□□□□ -0.13
SEMA6C-210ENST00000621728 PAXXQ9BUH6 204 aa14.26□□□□□ -0.13
SEMA6C-210ENST00000621728 RNF114Q9Y508 228 aa14.26□□□□□ -0.13
SEMA6C-210ENST00000621728 ATP5G3P48201 142 aa14.25□□□□□ -0.13
SEMA6C-210ENST00000621728 UBE2L3P68036 154 aaKnown RBP14.25□□□□□ -0.13
SEMA6C-210ENST00000621728 PQLC2Q6ZP29 291 aa14.25□□□□□ -0.13
SEMA6C-210ENST00000621728 DUX3Q96PT4 197 aa14.25□□□□□ -0.13
SEMA6C-210ENST00000621728 OR51M1Q9H341 326 aa14.25□□□□□ -0.13
SEMA6C-210ENST00000621728 YTHDF2Q9Y5A9 579 aaKnown RBP14.25□□□□□ -0.13
SEMA6C-210ENST00000621728 PHOX2AO14813 284 aa14.25□□□□□ -0.13
SEMA6C-210ENST00000621728 GATCO43716 136 aaKnown RBP14.25□□□□□ -0.13
SEMA6C-210ENST00000621728 GP9P14770 177 aa14.25□□□□□ -0.13
SEMA6C-210ENST00000621728 NDUFA6P56556 154 aa14.25□□□□□ -0.13
SEMA6C-210ENST00000621728 FXYD5Q96DB9 178 aa14.25□□□□□ -0.13
SEMA6C-210ENST00000621728 JMJD1CQ15652 2540 aa14.24□□□□□ -0.13
SEMA6C-210ENST00000621728 A0A1W2PRX2 142 aa14.24□□□□□ -0.13
SEMA6C-210ENST00000621728 ZNF320A2RRD8 509 aa14.24□□□□□ -0.13
SEMA6C-210ENST00000621728 NDUFA4O00483 81 aa14.24□□□□□ -0.13
SEMA6C-210ENST00000621728 NDUFB4O95168 129 aa14.24□□□□□ -0.13
SEMA6C-210ENST00000621728 EDN2P20800 178 aa14.24□□□□□ -0.13
SEMA6C-210ENST00000621728 FAM209BQ5JX69 171 aa14.24□□□□□ -0.13
SEMA6C-210ENST00000621728 C9JCJ5 164 aa14.23□□□□□ -0.13
SEMA6C-210ENST00000621728 TRGC1P0CF51 173 aa14.23□□□□□ -0.13
SEMA6C-210ENST00000621728 S100A2P29034 98 aa14.23□□□□□ -0.13
SEMA6C-210ENST00000621728 PROK1P58294 105 aa14.23□□□□□ -0.13
SEMA6C-210ENST00000621728 KLHL30-AS1Q8NEE0 82 aa14.23□□□□□ -0.13
SEMA6C-210ENST00000621728 BTF3P20290 206 aaKnown RBP14.23□□□□□ -0.13
SEMA6C-210ENST00000621728 FOXL1Q12952 345 aa14.23□□□□□ -0.13
SEMA6C-210ENST00000621728 BLNKQ8WV28 456 aa14.23□□□□□ -0.13
SEMA6C-210ENST00000621728 CITED2Q99967 270 aaPredicted RBP14.23□□□□□ -0.13
SEMA6C-210ENST00000621728 TRAV9-1A0A075B6T8 112 aa14.22□□□□□ -0.13
SEMA6C-210ENST00000621728 KRTAP10-3P60369 221 aa14.22□□□□□ -0.13
SEMA6C-210ENST00000621728 TMEM190Q8WZ59 177 aa14.22□□□□□ -0.13
SEMA6C-210ENST00000621728 FRZBQ92765 325 aa14.22□□□□□ -0.13
SEMA6C-210ENST00000621728 SELENOKQ9Y6D0 94 aa14.22□□□□□ -0.13
SEMA6C-210ENST00000621728 MRPS12O15235 138 aaKnown RBP14.21□□□□□ -0.13
SEMA6C-210ENST00000621728 RPEL1Q2QD12 228 aa14.21□□□□□ -0.13
SEMA6C-210ENST00000621728 TM4SF20Q53R12 229 aa14.21□□□□□ -0.13
SEMA6C-210ENST00000621728 DNLZQ5SXM8 178 aa14.21□□□□□ -0.13
SEMA6C-210ENST00000621728 C8orf86Q6ZUL3 223 aa14.21□□□□□ -0.13
SEMA6C-210ENST00000621728 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.21□□□□□ -0.13
SEMA6C-210ENST00000621728 C17orf77Q96MU5 243 aa14.21□□□□□ -0.13
SEMA6C-210ENST00000621728 C4orf3Q8WVX3 66 aa14.21□□□□□ -0.14
SEMA6C-210ENST00000621728 METTL26Q96S19 204 aa14.21□□□□□ -0.14
SEMA6C-210ENST00000621728 ZNF586Q9NXT0 402 aa14.21□□□□□ -0.14
SEMA6C-210ENST00000621728 CRYBB3P26998 211 aa14.2□□□□□ -0.14
SEMA6C-210ENST00000621728 HOXD3P31249 432 aaPredicted RBP14.2□□□□□ -0.14
SEMA6C-210ENST00000621728 SLURP1P55000 103 aa14.2□□□□□ -0.14
SEMA6C-210ENST00000621728 SFRP2Q96HF1 295 aa14.2□□□□□ -0.14
SEMA6C-210ENST00000621728 BUB3O43684 328 aa14.19□□□□□ -0.14
SEMA6C-210ENST00000621728 COA6Q5JTJ3 125 aaKnown RBP14.19□□□□□ -0.14
SEMA6C-210ENST00000621728 BPIFA4PQ86YQ2 179 aa14.19□□□□□ -0.14
SEMA6C-210ENST00000621728 HIST3H2BBQ8N257 126 aa14.19□□□□□ -0.14
SEMA6C-210ENST00000621728 OR11H1Q8NG94 326 aa14.19□□□□□ -0.14
SEMA6C-210ENST00000621728 TMEM14CQ9P0S9 112 aa14.19□□□□□ -0.14
SEMA6C-210ENST00000621728 SMAD5-AS1Q9Y6J3 95 aa14.19□□□□□ -0.14
SEMA6C-210ENST00000621728 U3KQE9 123 aa14.19□□□□□ -0.14
SEMA6C-210ENST00000621728 A0A1W2PRE2 83 aa14.19□□□□□ -0.14
SEMA6C-210ENST00000621728 GGTLC3B5MD39 225 aa14.19□□□□□ -0.14
SEMA6C-210ENST00000621728 NBEAP1P0C6P0 100 aa14.19□□□□□ -0.14
SEMA6C-210ENST00000621728 SYNJ2BPP57105 145 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms