RNA–Protein interactions for RNA: ENST00000621245.4

CPNE3-210, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-210ENST00000621245 BPIFCQ8NFQ6 507 aa8.07□□□□□ -1.12
CPNE3-210ENST00000621245 CIB3Q96Q77 187 aaPredicted RBP8.07□□□□□ -1.12
CPNE3-210ENST00000621245 SHANK2-AS3Q9BTD1 123 aa8.07□□□□□ -1.12
CPNE3-210ENST00000621245 TMEM147Q9BVK8 224 aa8.07□□□□□ -1.12
CPNE3-210ENST00000621245 SLC45A2Q9UMX9 530 aa8.07□□□□□ -1.12
CPNE3-210ENST00000621245 STRAPQ9Y3F4 350 aaKnown RBP8.07□□□□□ -1.12
CPNE3-210ENST00000621245 MRPS12O15235 138 aaKnown RBP8.06□□□□□ -1.12
CPNE3-210ENST00000621245 NDUFB6O95139 128 aa8.06□□□□□ -1.12
CPNE3-210ENST00000621245 METTL15P1P0C7V9 234 aa8.06□□□□□ -1.12
CPNE3-210ENST00000621245 LINC00869P0C866 280 aa8.06□□□□□ -1.12
CPNE3-210ENST00000621245 MALP21145 153 aa8.06□□□□□ -1.12
CPNE3-210ENST00000621245 MEOX2P50222 304 aa8.06□□□□□ -1.12
CPNE3-210ENST00000621245 SLC38A11Q08AI6 406 aa8.06□□□□□ -1.12
CPNE3-210ENST00000621245 RRN3P1Q2M238 152 aa8.06□□□□□ -1.12
CPNE3-210ENST00000621245 SPATA31B1PQ5VZV4 182 aa8.06□□□□□ -1.12
CPNE3-210ENST00000621245 PATE2Q6UY27 113 aa8.06□□□□□ -1.12
CPNE3-210ENST00000621245 TMEM144Q7Z5S9 345 aa8.06□□□□□ -1.12
CPNE3-210ENST00000621245 UBE2DNLQ8IWF7 75 aa8.06□□□□□ -1.12
CPNE3-210ENST00000621245 PSENENQ9NZ42 101 aa8.06□□□□□ -1.12
CPNE3-210ENST00000621245 DAD1P61803 113 aa8.05□□□□□ -1.12
CPNE3-210ENST00000621245 LGALS9BQ3B8N2 356 aa8.05□□□□□ -1.12
CPNE3-210ENST00000621245 MORN5Q5VZ52 161 aa8.05□□□□□ -1.12
CPNE3-210ENST00000621245 TMEM14EPQ6UXP3 125 aa8.05□□□□□ -1.12
CPNE3-210ENST00000621245 ZNF575Q86XF7 245 aa8.05□□□□□ -1.12
CPNE3-210ENST00000621245 ZNF738Q8NE65 137 aa8.05□□□□□ -1.12
CPNE3-210ENST00000621245 TMEM208Q9BTX3 173 aa8.05□□□□□ -1.12
CPNE3-210ENST00000621245 PARD6GQ9BYG4 376 aaPredicted RBP8.05□□□□□ -1.12
CPNE3-210ENST00000621245 HIGD1AQ9Y241 93 aa8.05□□□□□ -1.12
CPNE3-210ENST00000621245 RCL1Q9Y2P8 373 aaKnown RBP8.05□□□□□ -1.12
CPNE3-210ENST00000621245 H3BTX0 84 aa8.04□□□□□ -1.12
CPNE3-210ENST00000621245 BOLA2-SMG1P6H3BVE0 249 aa8.04□□□□□ -1.12
CPNE3-210ENST00000621245 CCSO14618 274 aa8.04□□□□□ -1.12
CPNE3-210ENST00000621245 CFDP00746 253 aaPredicted RBP8.04□□□□□ -1.12
CPNE3-210ENST00000621245 INSP01308 110 aa8.04□□□□□ -1.12
CPNE3-210ENST00000621245 IL5P05113 134 aa8.04□□□□□ -1.12
CPNE3-210ENST00000621245 OR5G3P0C626 314 aa8.04□□□□□ -1.12
CPNE3-210ENST00000621245 OR4E1P0C645 316 aa8.04□□□□□ -1.12
CPNE3-210ENST00000621245 S100A5P33763 92 aa8.04□□□□□ -1.12
CPNE3-210ENST00000621245 RPP30P78346 268 aaKnown RBP8.04□□□□□ -1.12
CPNE3-210ENST00000621245 HIST1H1AQ02539 215 aaPredicted RBP8.04□□□□□ -1.12
CPNE3-210ENST00000621245 OXA1LQ15070 435 aa8.04□□□□□ -1.12
CPNE3-210ENST00000621245 ARL6Q9H0F7 186 aa8.04□□□□□ -1.12
CPNE3-210ENST00000621245 A0A087X0K7 114 aa8.03□□□□□ -1.12
CPNE3-210ENST00000621245 PRAC2D3DTV9 90 aa8.03□□□□□ -1.12
CPNE3-210ENST00000621245 SLC17A3O00476 420 aa8.03□□□□□ -1.12
CPNE3-210ENST00000621245 HYPMO75409 117 aa8.03□□□□□ -1.12
CPNE3-210ENST00000621245 DEFB130BP0DP73 79 aa8.03□□□□□ -1.12
CPNE3-210ENST00000621245 DEFB130AP0DP74 79 aa8.03□□□□□ -1.12
CPNE3-210ENST00000621245 CXCL3P19876 107 aa8.03□□□□□ -1.12
CPNE3-210ENST00000621245 PLP1P60201 277 aa8.03□□□□□ -1.12
CPNE3-210ENST00000621245 SAMD13Q5VXD3 122 aa8.03□□□□□ -1.12
CPNE3-210ENST00000621245 OR8A1Q8NGG7 326 aa8.03□□□□□ -1.12
CPNE3-210ENST00000621245 SMIM8Q96KF7 97 aa8.03□□□□□ -1.12
CPNE3-210ENST00000621245 FAM210BQ96KR6 192 aa8.03□□□□□ -1.12
CPNE3-210ENST00000621245 GPR82Q96P67 336 aa8.03□□□□□ -1.12
CPNE3-210ENST00000621245 KRTAP4-5Q9BYR2 181 aa8.03□□□□□ -1.12
CPNE3-210ENST00000621245 PIGBOS1A0A0B4J2F0 54 aa8.02□□□□□ -1.13
CPNE3-210ENST00000621245 TEX48A0A1B0GUV7 120 aa8.02□□□□□ -1.13
CPNE3-210ENST00000621245 DUSP14O95147 198 aaKnown RBP8.02□□□□□ -1.13
CPNE3-210ENST00000621245 IFNA21P01568 189 aa8.02□□□□□ -1.13
CPNE3-210ENST00000621245 RAP2BP61225 183 aa8.02□□□□□ -1.13
CPNE3-210ENST00000621245 DLK1P80370 383 aa8.02□□□□□ -1.13
CPNE3-210ENST00000621245 TRIQKQ629K1 86 aa8.02□□□□□ -1.13
CPNE3-210ENST00000621245 ZBTB8BQ8NAP8 495 aaPredicted RBP8.02□□□□□ -1.13
CPNE3-210ENST00000621245 DEDD2Q8WXF8 326 aa8.02□□□□□ -1.13
CPNE3-210ENST00000621245 MGST2Q99735 147 aa8.02□□□□□ -1.13
CPNE3-210ENST00000621245 ARV1Q9H2C2 271 aa8.02□□□□□ -1.13
CPNE3-210ENST00000621245 K7EPK0 472 aa8.01□□□□□ -1.13
CPNE3-210ENST00000621245 MBPP02686 304 aaPredicted RBP8.01□□□□□ -1.13
CPNE3-210ENST00000621245 IL7P13232 177 aa8.01□□□□□ -1.13
CPNE3-210ENST00000621245 RPL7P18124 248 aaKnown RBP8.01□□□□□ -1.13
CPNE3-210ENST00000621245 RHOBP62745 196 aa8.01□□□□□ -1.13
CPNE3-210ENST00000621245 PSG3Q16557 428 aa8.01□□□□□ -1.13
CPNE3-210ENST00000621245 IAH1Q2TAA2 248 aaPredicted RBP8.01□□□□□ -1.13
CPNE3-210ENST00000621245 SPANXN2Q5MJ10 180 aa8.01□□□□□ -1.13
CPNE3-210ENST00000621245 RPUSD4Q96CM3 377 aaKnown RBP8.01□□□□□ -1.13
CPNE3-210ENST00000621245 HERC1Q15751 4861 aa8.01□□□□□ -1.13
CPNE3-210ENST00000621245 C7orf66A4D0T2 115 aa8□□□□□ -1.13
CPNE3-210ENST00000621245 LYRM9A8MSI8 78 aa8□□□□□ -1.13
CPNE3-210ENST00000621245 AGPAT2O15120 278 aa8□□□□□ -1.13
CPNE3-210ENST00000621245 PLA2G10O15496 165 aa8□□□□□ -1.13
CPNE3-210ENST00000621245 HTN1P15515 57 aa8□□□□□ -1.13
CPNE3-210ENST00000621245 OPCMLQ14982 345 aa8□□□□□ -1.13
CPNE3-210ENST00000621245 RNF212Q495C1 297 aa8□□□□□ -1.13
CPNE3-210ENST00000621245 LINC00305Q7Z4B0 112 aa8□□□□□ -1.13
CPNE3-210ENST00000621245 NUDT10Q8NFP7 164 aa8□□□□□ -1.13
CPNE3-210ENST00000621245 MITD1Q8WV92 249 aa8□□□□□ -1.13
CPNE3-210ENST00000621245 TMEM37Q8WXS4 190 aa8□□□□□ -1.13
CPNE3-210ENST00000621245 NUDT11Q96G61 164 aa8□□□□□ -1.13
CPNE3-210ENST00000621245 LINC01587Q99440 93 aa8□□□□□ -1.13
CPNE3-210ENST00000621245 C1orf43Q9BWL3 253 aa8□□□□□ -1.13
CPNE3-210ENST00000621245 C11orf1Q9H5F2 150 aa8□□□□□ -1.13
CPNE3-210ENST00000621245 GSKIPQ9P0R6 139 aa8□□□□□ -1.13
CPNE3-210ENST00000621245 TRAV5A0A0B4J249 113 aa7.99□□□□□ -1.13
CPNE3-210ENST00000621245 NAP1L6A6NFF2 107 aa7.99□□□□□ -1.13
CPNE3-210ENST00000621245 F5H768 121 aa7.99□□□□□ -1.13
CPNE3-210ENST00000621245 H3BQ15 152 aa7.99□□□□□ -1.13
CPNE3-210ENST00000621245 NUDT3O95989 172 aa7.99□□□□□ -1.13
CPNE3-210ENST00000621245 PLA2G1BP04054 148 aaKnown RBP7.99□□□□□ -1.13
CPNE3-210ENST00000621245 MED14OSP0DP75 135 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms