RNA–Protein interactions for RNA: ENST00000620996.4

VTA1-205, Transcript of vesicle trafficking 1, humanhuman

TSL 3 BASIC

Gene VTA1, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-205ENST00000620996 FXYD5Q96DB9 178 aa7.8□□□□□ -1.16
VTA1-205ENST00000620996 RNF125Q96EQ8 232 aa7.8□□□□□ -1.16
VTA1-205ENST00000620996 SLC25A39Q9BZJ4 359 aaPredicted RBP7.8□□□□□ -1.16
VTA1-205ENST00000620996 PGPA6NDG6 321 aa7.8□□□□□ -1.16
VTA1-205ENST00000620996 NBEAP1P0C6P0 100 aa7.8□□□□□ -1.16
VTA1-205ENST00000620996 EGR2P11161 476 aaPredicted RBP7.8□□□□□ -1.16
VTA1-205ENST00000620996 LINC01356Q8N9X3 169 aa7.8□□□□□ -1.16
VTA1-205ENST00000620996 STXBP6Q8NFX7 210 aa7.8□□□□□ -1.16
VTA1-205ENST00000620996 SERTAD4Q9NUC0 356 aa7.8□□□□□ -1.16
VTA1-205ENST00000620996 CSPG4Q6UVK1 2322 aa7.79□□□□□ -1.16
VTA1-205ENST00000620996 A0A1W2PRE2 83 aa7.79□□□□□ -1.16
VTA1-205ENST00000620996 SCGB2A1O75556 95 aa7.79□□□□□ -1.16
VTA1-205ENST00000620996 TMEM183BQ1AE95 376 aa7.79□□□□□ -1.16
VTA1-205ENST00000620996 C5orf56Q8N8D9 126 aa7.79□□□□□ -1.16
VTA1-205ENST00000620996 SGMS2Q8NHU3 365 aa7.79□□□□□ -1.16
VTA1-205ENST00000620996 SFRP2Q96HF1 295 aa7.79□□□□□ -1.16
VTA1-205ENST00000620996 CNN1P51911 297 aaKnown RBP7.79□□□□□ -1.16
VTA1-205ENST00000620996 KRTDAPP60985 99 aa7.79□□□□□ -1.16
VTA1-205ENST00000620996 ANAPC16Q96DE5 110 aa7.79□□□□□ -1.16
VTA1-205ENST00000620996 LAMTOR2Q9Y2Q5 125 aa7.79□□□□□ -1.16
VTA1-205ENST00000620996 DOPEY2Q9Y3R5 2298 aa7.79□□□□□ -1.16
VTA1-205ENST00000620996 SLC17A3O00476 420 aa7.79□□□□□ -1.16
VTA1-205ENST00000620996 UBE2G1P62253 170 aa7.79□□□□□ -1.16
VTA1-205ENST00000620996 KCNIP4Q6PIL6 250 aa7.79□□□□□ -1.16
VTA1-205ENST00000620996 OR10G8Q8NGN5 311 aa7.79□□□□□ -1.16
VTA1-205ENST00000620996 ORAOV1Q8WV07 137 aa7.79□□□□□ -1.16
VTA1-205ENST00000620996 CLEC19AQ6UXS0 136 aa7.78□□□□□ -1.16
VTA1-205ENST00000620996 ZNF329Q86UD4 541 aa7.78□□□□□ -1.16
VTA1-205ENST00000620996 COX11Q9Y6N1 276 aa7.78□□□□□ -1.16
VTA1-205ENST00000620996 TRAV30A0A087WSZ9 112 aa7.78□□□□□ -1.16
VTA1-205ENST00000620996 PEX7O00628 323 aa7.78□□□□□ -1.16
VTA1-205ENST00000620996 TOMM40O96008 361 aa7.78□□□□□ -1.16
VTA1-205ENST00000620996 BCL6BQ8N143 479 aaPredicted RBP7.78□□□□□ -1.16
VTA1-205ENST00000620996 FAM110DQ8TAY7 271 aaPredicted RBP7.78□□□□□ -1.16
VTA1-205ENST00000620996 CLEC3BP05452 202 aa7.77□□□□□ -1.16
VTA1-205ENST00000620996 DEFB113Q30KQ7 82 aa7.77□□□□□ -1.16
VTA1-205ENST00000620996 EXOC3-AS1Q8N2X6 119 aa7.77□□□□□ -1.16
VTA1-205ENST00000620996 ZNF491Q8N8L2 437 aa7.77□□□□□ -1.16
VTA1-205ENST00000620996 OR4F17Q8NGA8 305 aa7.77□□□□□ -1.16
VTA1-205ENST00000620996 CMTM2Q8TAZ6 248 aa7.77□□□□□ -1.16
VTA1-205ENST00000620996 C11orf52Q96A22 123 aa7.77□□□□□ -1.16
VTA1-205ENST00000620996 Q96MF0 132 aa7.77□□□□□ -1.16
VTA1-205ENST00000620996 CHRDL1Q9BU40 450 aa7.77□□□□□ -1.16
VTA1-205ENST00000620996 ZFHX3Q15911 3703 aa7.77□□□□□ -1.16
VTA1-205ENST00000620996 IGHV3OR16-13A0A075B7E8 117 aa7.77□□□□□ -1.17
VTA1-205ENST00000620996 IGHV3-74A0A0B4J1X5 117 aa7.77□□□□□ -1.17
VTA1-205ENST00000620996 TRAV41A0A0B4J266 112 aa7.77□□□□□ -1.17
VTA1-205ENST00000620996 K7EN84 100 aa7.77□□□□□ -1.17
VTA1-205ENST00000620996 RNASE7Q9H1E1 156 aaKnown RBP7.77□□□□□ -1.17
VTA1-205ENST00000620996 Q9H3A6 140 aa7.77□□□□□ -1.17
VTA1-205ENST00000620996 TMEM242Q9NWH2 141 aa7.77□□□□□ -1.17
VTA1-205ENST00000620996 IGHV3-66A0A0C4DH42 116 aa7.77□□□□□ -1.17
VTA1-205ENST00000620996 SERTM2A0A1B0GWG4 89 aa7.77□□□□□ -1.17
VTA1-205ENST00000620996 K7ERU9 68 aa7.77□□□□□ -1.17
VTA1-205ENST00000620996 SPINK4O60575 86 aa7.77□□□□□ -1.17
VTA1-205ENST00000620996 GP9P14770 177 aa7.77□□□□□ -1.17
VTA1-205ENST00000620996 SCGB2A2Q13296 93 aa7.77□□□□□ -1.17
VTA1-205ENST00000620996 SPATA45Q537H7 98 aa7.77□□□□□ -1.17
VTA1-205ENST00000620996 BPIFA4PQ86YQ2 179 aa7.77□□□□□ -1.17
VTA1-205ENST00000620996 PIFOQ8TCI5 191 aa7.77□□□□□ -1.17
VTA1-205ENST00000620996 ARL2-SNX15V9GYD0 113 aa7.77□□□□□ -1.17
VTA1-205ENST00000620996 IGHV3-49A0A0A0MS15 119 aa7.76□□□□□ -1.17
VTA1-205ENST00000620996 SMAD7O15105 426 aaKnown RBP7.76□□□□□ -1.17
VTA1-205ENST00000620996 ZNF207O43670 478 aaKnown RBP7.76□□□□□ -1.17
VTA1-205ENST00000620996 TRGV3P03979 118 aa7.76□□□□□ -1.17
VTA1-205ENST00000620996 TCL1AP56279 114 aa7.76□□□□□ -1.17
VTA1-205ENST00000620996 BLCAPP62952 87 aa7.76□□□□□ -1.17
VTA1-205ENST00000620996 TP73-AS1Q9UF72 201 aa7.76□□□□□ -1.17
VTA1-205ENST00000620996 RPL15P61313 204 aaKnown RBP7.76□□□□□ -1.17
VTA1-205ENST00000620996 SMAGPQ0VAQ4 97 aa7.76□□□□□ -1.17
VTA1-205ENST00000620996 BAGE2Q86Y30 109 aa7.76□□□□□ -1.17
VTA1-205ENST00000620996 SMIM12Q96EX1 92 aa7.76□□□□□ -1.17
VTA1-205ENST00000620996 C17orf77Q96MU5 243 aa7.76□□□□□ -1.17
VTA1-205ENST00000620996 SAMD10Q9BYL1 202 aa7.76□□□□□ -1.17
VTA1-205ENST00000620996 ISLRO14498 428 aa7.76□□□□□ -1.17
VTA1-205ENST00000620996 AMY1AP04745 511 aa7.76□□□□□ -1.17
VTA1-205ENST00000620996 TPPP2P59282 170 aa7.76□□□□□ -1.17
VTA1-205ENST00000620996 PLP1P60201 277 aa7.76□□□□□ -1.17
VTA1-205ENST00000620996 DEFB112Q30KQ8 113 aa7.76□□□□□ -1.17
VTA1-205ENST00000620996 Q6ZWC4 215 aa7.76□□□□□ -1.17
VTA1-205ENST00000620996 OR8I2Q8N0Y5 310 aa7.76□□□□□ -1.17
VTA1-205ENST00000620996 OR1N2Q8NGR9 330 aa7.76□□□□□ -1.17
VTA1-205ENST00000620996 SHANK2-AS3Q9BTD1 123 aa7.76□□□□□ -1.17
VTA1-205ENST00000620996 SRD5A3Q9H8P0 318 aa7.76□□□□□ -1.17
VTA1-205ENST00000620996 ZNF586Q9NXT0 402 aa7.76□□□□□ -1.17
VTA1-205ENST00000620996 MRPL27Q9P0M9 148 aaKnown RBP7.76□□□□□ -1.17
VTA1-205ENST00000620996 ZANQ9Y493 2812 aa7.75□□□□□ -1.17
VTA1-205ENST00000620996 IGHV3-11P01762 117 aa7.75□□□□□ -1.17
VTA1-205ENST00000620996 IGHV4-59P01825 116 aa7.75□□□□□ -1.17
VTA1-205ENST00000620996 ATP5G2Q06055 141 aa7.75□□□□□ -1.17
VTA1-205ENST00000620996 SAMD13Q5VXD3 122 aa7.75□□□□□ -1.17
VTA1-205ENST00000620996 LCNL1Q6ZST4 164 aa7.75□□□□□ -1.17
VTA1-205ENST00000620996 EEF1AKMT3Q96AZ1 226 aa7.75□□□□□ -1.17
VTA1-205ENST00000620996 RABAC1Q9UI14 185 aa7.75□□□□□ -1.17
VTA1-205ENST00000620996 EPDR1Q9UM22 224 aa7.75□□□□□ -1.17
VTA1-205ENST00000620996 C9JCJ5 164 aa7.75□□□□□ -1.17
VTA1-205ENST00000620996 F8W735 103 aaPredicted RBP7.75□□□□□ -1.17
VTA1-205ENST00000620996 H3BRN7 92 aa7.75□□□□□ -1.17
VTA1-205ENST00000620996 J3QKU1 62 aa7.75□□□□□ -1.17
VTA1-205ENST00000620996 PFN1P07737 140 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms