RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 LYNX1P0DP58 116 aa5.62□□□□□ -1.51
NEDD9-216ENST00000620854 BMI1P35226 326 aa5.62□□□□□ -1.51
NEDD9-216ENST00000620854 MFAP4P55083 255 aa5.62□□□□□ -1.51
NEDD9-216ENST00000620854 OCIAD2Q56VL3 154 aa5.62□□□□□ -1.51
NEDD9-216ENST00000620854 MRPL32Q9BYC8 188 aaKnown RBP5.62□□□□□ -1.51
NEDD9-216ENST00000620854 MRPL36Q9P0J6 103 aaKnown RBP5.62□□□□□ -1.51
NEDD9-216ENST00000620854 PCSK5Q92824 1860 aa5.61□□□□□ -1.51
NEDD9-216ENST00000620854 A0A1B0GUT8 65 aa5.61□□□□□ -1.51
NEDD9-216ENST00000620854 TMEM8BA6NDV4 472 aa5.61□□□□□ -1.51
NEDD9-216ENST00000620854 PSG9Q00887 426 aa5.61□□□□□ -1.51
NEDD9-216ENST00000620854 DIAPH2-AS1Q14236 149 aa5.61□□□□□ -1.51
NEDD9-216ENST00000620854 FAM90A1Q86YD7 464 aa5.61□□□□□ -1.51
NEDD9-216ENST00000620854 TMEM186Q96B77 213 aa5.61□□□□□ -1.51
NEDD9-216ENST00000620854 URB1-AS1Q96HZ7 61 aa5.61□□□□□ -1.51
NEDD9-216ENST00000620854 ZNF414Q96IQ9 312 aa5.61□□□□□ -1.51
NEDD9-216ENST00000620854 C19orf24Q9BVV8 132 aa5.61□□□□□ -1.51
NEDD9-216ENST00000620854 MAP1LC3AQ9H492 121 aa5.61□□□□□ -1.51
NEDD9-216ENST00000620854 PTPRBP23467 1997 aa5.61□□□□□ -1.51
NEDD9-216ENST00000620854 IGHV1-24A0A0C4DH33 117 aa5.61□□□□□ -1.51
NEDD9-216ENST00000620854 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.61□□□□□ -1.51
NEDD9-216ENST00000620854 ITGB1BP1O14713 200 aa5.61□□□□□ -1.51
NEDD9-216ENST00000620854 TOMM40O96008 361 aa5.61□□□□□ -1.51
NEDD9-216ENST00000620854 HERVK_113P61574 105 aa5.61□□□□□ -1.51
NEDD9-216ENST00000620854 BVES-AS1Q5T3Y7 98 aa5.61□□□□□ -1.51
NEDD9-216ENST00000620854 FAM74A4Q5TZK3 123 aa5.61□□□□□ -1.51
NEDD9-216ENST00000620854 CCDC144NLQ6NUI1 221 aa5.61□□□□□ -1.51
NEDD9-216ENST00000620854 CLEC2AQ6UVW9 174 aa5.61□□□□□ -1.51
NEDD9-216ENST00000620854 RBPMS2Q6ZRY4 209 aaKnown RBP5.61□□□□□ -1.51
NEDD9-216ENST00000620854 OSR1Q8TAX0 266 aaPredicted RBP5.61□□□□□ -1.51
NEDD9-216ENST00000620854 DPF1Q92782 380 aa5.61□□□□□ -1.51
NEDD9-216ENST00000620854 FAM167A-AS1Q96KT0 104 aa5.61□□□□□ -1.51
NEDD9-216ENST00000620854 IGHV1-18A0A0C4DH31 117 aa5.61□□□□□ -1.51
NEDD9-216ENST00000620854 PPIFP30405 207 aaKnown RBP5.61□□□□□ -1.51
NEDD9-216ENST00000620854 CD69Q07108 199 aa5.61□□□□□ -1.51
NEDD9-216ENST00000620854 C17orf58Q2M2W7 97 aa5.61□□□□□ -1.51
NEDD9-216ENST00000620854 RUSC1-AS1Q66K80 236 aa5.61□□□□□ -1.51
NEDD9-216ENST00000620854 CIARTQ8N365 385 aaPredicted RBP5.61□□□□□ -1.51
NEDD9-216ENST00000620854 GPR82Q96P67 336 aa5.61□□□□□ -1.51
NEDD9-216ENST00000620854 MEGF9Q9H1U4 602 aa5.61□□□□□ -1.51
NEDD9-216ENST00000620854 CHODLQ9H9P2 273 aa5.61□□□□□ -1.51
NEDD9-216ENST00000620854 MRPL27Q9P0M9 148 aaKnown RBP5.61□□□□□ -1.51
NEDD9-216ENST00000620854 A1L4Q6 167 aa5.6□□□□□ -1.51
NEDD9-216ENST00000620854 M0R381 172 aa5.6□□□□□ -1.51
NEDD9-216ENST00000620854 RNASE2P10153 161 aaKnown RBP5.6□□□□□ -1.51
NEDD9-216ENST00000620854 PRR30Q53SZ7 412 aaPredicted RBP5.6□□□□□ -1.51
NEDD9-216ENST00000620854 PATE2Q6UY27 113 aa5.6□□□□□ -1.51
NEDD9-216ENST00000620854 ZNF329Q86UD4 541 aa5.6□□□□□ -1.51
NEDD9-216ENST00000620854 DDB2Q92466 427 aa5.6□□□□□ -1.51
NEDD9-216ENST00000620854 PRELID3AQ96N28 172 aa5.6□□□□□ -1.51
NEDD9-216ENST00000620854 PHLDA3Q9Y5J5 127 aa5.6□□□□□ -1.51
NEDD9-216ENST00000620854 TRAV30A0A087WSZ9 112 aa5.6□□□□□ -1.51
NEDD9-216ENST00000620854 A0A0G2JNJ9 132 aa5.6□□□□□ -1.51
NEDD9-216ENST00000620854 SRRM5B3KS81 715 aa5.6□□□□□ -1.51
NEDD9-216ENST00000620854 UPK2O00526 184 aa5.6□□□□□ -1.51
NEDD9-216ENST00000620854 PRCDQ00LT1 54 aa5.6□□□□□ -1.51
NEDD9-216ENST00000620854 LY6EQ16553 131 aa5.6□□□□□ -1.51
NEDD9-216ENST00000620854 GTSF1Q8WW33 167 aa5.6□□□□□ -1.51
NEDD9-216ENST00000620854 Q9H3A6 140 aa5.6□□□□□ -1.51
NEDD9-216ENST00000620854 RPP21Q9H633 154 aaKnown RBP5.6□□□□□ -1.51
NEDD9-216ENST00000620854 Q9UFV3 132 aa5.6□□□□□ -1.51
NEDD9-216ENST00000620854 ARHGAP32A7KAX9 2087 aa5.6□□□□□ -1.51
NEDD9-216ENST00000620854 ANKRD11Q6UB99 2663 aaPredicted RBP5.6□□□□□ -1.51
NEDD9-216ENST00000620854 K7EP13 123 aa5.6□□□□□ -1.51
NEDD9-216ENST00000620854 CRXO43186 299 aaPredicted RBP5.6□□□□□ -1.51
NEDD9-216ENST00000620854 MBD6Q96DN6 1003 aa5.6□□□□□ -1.51
NEDD9-216ENST00000620854 SMIM12Q96EX1 92 aa5.6□□□□□ -1.51
NEDD9-216ENST00000620854 LYRM7Q5U5X0 104 aa5.59□□□□□ -1.51
NEDD9-216ENST00000620854 PRSS57Q6UWY2 283 aa5.59□□□□□ -1.51
NEDD9-216ENST00000620854 BEX4Q9NWD9 120 aaPredicted RBP5.59□□□□□ -1.51
NEDD9-216ENST00000620854 EPDR1Q9UM22 224 aa5.59□□□□□ -1.51
NEDD9-216ENST00000620854 ZNF257Q9Y2Q1 563 aa5.59□□□□□ -1.51
NEDD9-216ENST00000620854 MYO9AB2RTY4 2548 aa5.59□□□□□ -1.51
NEDD9-216ENST00000620854 C17orf100A8MU93 164 aa5.59□□□□□ -1.51
NEDD9-216ENST00000620854 H3BUT2 72 aa5.59□□□□□ -1.51
NEDD9-216ENST00000620854 TGFAP01135 160 aa5.59□□□□□ -1.51
NEDD9-216ENST00000620854 WT1-ASQ06250 92 aa5.59□□□□□ -1.51
NEDD9-216ENST00000620854 EXOC3-AS1Q8N2X6 119 aa5.59□□□□□ -1.51
NEDD9-216ENST00000620854 SLC25A15Q9Y619 301 aa5.59□□□□□ -1.51
NEDD9-216ENST00000620854 FAM90A9PA6NNJ1 464 aa5.59□□□□□ -1.51
NEDD9-216ENST00000620854 GPR183P32249 361 aa5.59□□□□□ -1.51
NEDD9-216ENST00000620854 METTL26Q96S19 204 aa5.59□□□□□ -1.51
NEDD9-216ENST00000620854 PEF1Q9UBV8 284 aaKnown RBP5.59□□□□□ -1.51
NEDD9-216ENST00000620854 FAM106CPP0CH98 169 aa5.58□□□□□ -1.52
NEDD9-216ENST00000620854 ATP5J2P56134 94 aa5.58□□□□□ -1.52
NEDD9-216ENST00000620854 FAM106AQ4KMX7 169 aa5.58□□□□□ -1.52
NEDD9-216ENST00000620854 ZNF474Q6S9Z5 364 aaPredicted RBP5.58□□□□□ -1.52
NEDD9-216ENST00000620854 TPSG1Q9NRR2 321 aa5.58□□□□□ -1.52
NEDD9-216ENST00000620854 TNRC6BQ9UPQ9 1833 aaKnown RBP5.58□□□□□ -1.52
NEDD9-216ENST00000620854 FAM231BA6NCW3 169 aa5.58□□□□□ -1.52
NEDD9-216ENST00000620854 GNLYP22749 145 aa5.58□□□□□ -1.52
NEDD9-216ENST00000620854 IGFL2Q6UWQ7 119 aa5.58□□□□□ -1.52
NEDD9-216ENST00000620854 RPRMLQ8N4K4 120 aa5.58□□□□□ -1.52
NEDD9-216ENST00000620854 OR10J6PQ8NGY7 276 aa5.58□□□□□ -1.52
NEDD9-216ENST00000620854 DEFB104AQ8WTQ1 72 aa5.58□□□□□ -1.52
NEDD9-216ENST00000620854 CACNG8Q8WXS5 425 aa5.58□□□□□ -1.52
NEDD9-216ENST00000620854 IGHV3OR16-12A0A075B7B8 117 aa5.58□□□□□ -1.52
NEDD9-216ENST00000620854 OR11H12B2RN74 326 aa5.58□□□□□ -1.52
NEDD9-216ENST00000620854 NCR2O95944 276 aa5.58□□□□□ -1.52
NEDD9-216ENST00000620854 HIST1H1AQ02539 215 aaPredicted RBP5.58□□□□□ -1.52
NEDD9-216ENST00000620854 OR11H1Q8NG94 326 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms