RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, human

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD3-215	ENST00000619322	ZNF257	Q9Y2Q1	563 aa		4.13	□□□□□ -1.75
CBWD3-215	ENST00000619322	PLEC	Q15149	4684 aa	Known RBP	4.12	□□□□□ -1.75
CBWD3-215	ENST00000619322	DIRC3	C9JPN6	131 aa		4.12	□□□□□ -1.75
CBWD3-215	ENST00000619322	NUDT3	O95989	172 aa		4.12	□□□□□ -1.75
CBWD3-215	ENST00000619322	STAG3L3	P0CL85	134 aa		4.12	□□□□□ -1.75
CBWD3-215	ENST00000619322	CD28	P10747	220 aa		4.12	□□□□□ -1.75
CBWD3-215	ENST00000619322	ATP6V0C	P27449	155 aa		4.12	□□□□□ -1.75
CBWD3-215	ENST00000619322	GALR1	P47211	349 aa		4.12	□□□□□ -1.75
CBWD3-215	ENST00000619322	TCL1A	P56279	114 aa		4.12	□□□□□ -1.75
CBWD3-215	ENST00000619322	TMEM14EP	Q6UXP3	125 aa		4.12	□□□□□ -1.75
CBWD3-215	ENST00000619322	BAGE3	Q86Y29	109 aa		4.12	□□□□□ -1.75
CBWD3-215	ENST00000619322	BAGE2	Q86Y30	109 aa		4.12	□□□□□ -1.75
CBWD3-215	ENST00000619322	SMIM20	Q8N5G0	67 aa		4.12	□□□□□ -1.75
CBWD3-215	ENST00000619322	ZNF645	Q8N7E2	425 aa		4.12	□□□□□ -1.75
CBWD3-215	ENST00000619322	SPIN2A	Q99865	258 aa		4.12	□□□□□ -1.75
CBWD3-215	ENST00000619322	SPIN2B	Q9BPZ2	258 aa		4.12	□□□□□ -1.75
CBWD3-215	ENST00000619322	NABP2	Q9BQ15	211 aa		4.12	□□□□□ -1.75
CBWD3-215	ENST00000619322	PSMG3	Q9BT73	122 aa	Predicted RBP	4.12	□□□□□ -1.75
CBWD3-215	ENST00000619322	ZNF586	Q9NXT0	402 aa		4.12	□□□□□ -1.75
CBWD3-215	ENST00000619322	HSPB7	Q9UBY9	170 aa		4.12	□□□□□ -1.75
CBWD3-215	ENST00000619322	MEGF8	Q7Z7M0	2845 aa		4.12	□□□□□ -1.75
CBWD3-215	ENST00000619322		A0A087X0K7	114 aa		4.12	□□□□□ -1.75
CBWD3-215	ENST00000619322		A0A0G2JLM5	398 aa		4.12	□□□□□ -1.75
CBWD3-215	ENST00000619322	GCG	P01275	180 aa		4.12	□□□□□ -1.75
CBWD3-215	ENST00000619322	IGLV2-23	P01705	113 aa		4.12	□□□□□ -1.75
CBWD3-215	ENST00000619322	ZNF266	Q14584	549 aa		4.12	□□□□□ -1.75
CBWD3-215	ENST00000619322	MORN3	Q6PF18	240 aa	Predicted RBP	4.12	□□□□□ -1.75
CBWD3-215	ENST00000619322	ZNF695	Q8IW36	515 aa		4.12	□□□□□ -1.75
CBWD3-215	ENST00000619322	LFNG	Q8NES3	379 aa		4.12	□□□□□ -1.75
CBWD3-215	ENST00000619322	OR1B1	Q8NGR6	318 aa		4.12	□□□□□ -1.75
CBWD3-215	ENST00000619322	RAX2	Q96IS3	184 aa		4.12	□□□□□ -1.75
CBWD3-215	ENST00000619322	PRR25	Q96S07	402 aa		4.12	□□□□□ -1.75
CBWD3-215	ENST00000619322	DERL1	Q9BUN8	251 aa		4.12	□□□□□ -1.75
CBWD3-215	ENST00000619322	MXRA5	Q9NR99	2828 aa		4.12	□□□□□ -1.75
CBWD3-215	ENST00000619322	BORCS7-ASMT	A0A0B4J1R7	106 aa		4.11	□□□□□ -1.75
CBWD3-215	ENST00000619322	PRSS46	E5RG02	174 aa		4.11	□□□□□ -1.75
CBWD3-215	ENST00000619322	NBEAP1	P0C6P0	100 aa		4.11	□□□□□ -1.75
CBWD3-215	ENST00000619322	PSG9	Q00887	426 aa		4.11	□□□□□ -1.75
CBWD3-215	ENST00000619322	ZNF726P1	Q15940	193 aa		4.11	□□□□□ -1.75
CBWD3-215	ENST00000619322	ZNF506	Q5JVG8	444 aa		4.11	□□□□□ -1.75
CBWD3-215	ENST00000619322	TMEM144	Q7Z5S9	345 aa		4.11	□□□□□ -1.75
CBWD3-215	ENST00000619322	NIT1	Q86X76	327 aa		4.11	□□□□□ -1.75
CBWD3-215	ENST00000619322	ZCCHC24	Q8N2G6	241 aa	Known RBP	4.11	□□□□□ -1.75
CBWD3-215	ENST00000619322	OSR1	Q8TAX0	266 aa	Predicted RBP	4.11	□□□□□ -1.75
CBWD3-215	ENST00000619322	CMTM2	Q8TAZ6	248 aa		4.11	□□□□□ -1.75
CBWD3-215	ENST00000619322	MBD3L1	Q8WWY6	194 aa		4.11	□□□□□ -1.75
CBWD3-215	ENST00000619322	RAB40C	Q96S21	281 aa		4.11	□□□□□ -1.75
CBWD3-215	ENST00000619322	FOXA2	Q9Y261	457 aa	Predicted RBP	4.11	□□□□□ -1.75
CBWD3-215	ENST00000619322	TRAPPC1	Q9Y5R8	145 aa		4.11	□□□□□ -1.75
CBWD3-215	ENST00000619322	HERC2	O95714	4834 aa		4.11	□□□□□ -1.75
CBWD3-215	ENST00000619322		A0A087WWC5	75 aa		4.11	□□□□□ -1.75
CBWD3-215	ENST00000619322		K7EP13	123 aa		4.11	□□□□□ -1.75
CBWD3-215	ENST00000619322	CORT	O00230	105 aa		4.11	□□□□□ -1.75
CBWD3-215	ENST00000619322	SLC17A3	O00476	420 aa		4.11	□□□□□ -1.75
CBWD3-215	ENST00000619322	CDIPT	O14735	213 aa		4.11	□□□□□ -1.75
CBWD3-215	ENST00000619322	RBMXL2	O75526	392 aa	Known RBP	4.11	□□□□□ -1.75
CBWD3-215	ENST00000619322	PF4V1	P10720	104 aa		4.11	□□□□□ -1.75
CBWD3-215	ENST00000619322	CKS1B	P61024	79 aa		4.11	□□□□□ -1.75
CBWD3-215	ENST00000619322	PAFAH1B2	P68402	229 aa		4.11	□□□□□ -1.75
CBWD3-215	ENST00000619322	ARL16	Q0P5N6	197 aa		4.11	□□□□□ -1.75
CBWD3-215	ENST00000619322	SFTA2	Q6UW10	78 aa		4.11	□□□□□ -1.75
CBWD3-215	ENST00000619322		Q71RC1	249 aa	Predicted RBP	4.11	□□□□□ -1.75
CBWD3-215	ENST00000619322	ABHD12	Q8N2K0	398 aa		4.11	□□□□□ -1.75
CBWD3-215	ENST00000619322	MUC7	Q8TAX7	377 aa		4.11	□□□□□ -1.75
CBWD3-215	ENST00000619322	RCHY1	Q96PM5	261 aa		4.11	□□□□□ -1.75
CBWD3-215	ENST00000619322	SMIM7	Q9BQ49	75 aa		4.11	□□□□□ -1.75
CBWD3-215	ENST00000619322	LINC00467	Q9BRT7	94 aa		4.11	□□□□□ -1.75
CBWD3-215	ENST00000619322	KIAA1456	Q9P272	454 aa		4.11	□□□□□ -1.75
CBWD3-215	ENST00000619322	TIMM9	Q9Y5J7	89 aa		4.11	□□□□□ -1.75
CBWD3-215	ENST00000619322	hDV102S1	A0JD36	115 aa		4.11	□□□□□ -1.75
CBWD3-215	ENST00000619322	C12orf77	C9JDV5	145 aa		4.11	□□□□□ -1.75
CBWD3-215	ENST00000619322		H7BYZ3	331 aa		4.11	□□□□□ -1.75
CBWD3-215	ENST00000619322	PROP1	O75360	226 aa		4.11	□□□□□ -1.75
CBWD3-215	ENST00000619322	MGST1	P10620	155 aa	Known RBP	4.11	□□□□□ -1.75
CBWD3-215	ENST00000619322	CNN1	P51911	297 aa	Known RBP	4.11	□□□□□ -1.75
CBWD3-215	ENST00000619322	NAV2	Q8IVL1	2488 aa		4.11	□□□□□ -1.75
CBWD3-215	ENST00000619322	OR5AU1	Q8NGC0	362 aa		4.11	□□□□□ -1.75
CBWD3-215	ENST00000619322	IFI27L2	Q9H2X8	130 aa		4.11	□□□□□ -1.75
CBWD3-215	ENST00000619322	LINC01619	G3V211	115 aa		4.1	□□□□□ -1.75
CBWD3-215	ENST00000619322	SSSCA1	O60232	199 aa		4.1	□□□□□ -1.75
CBWD3-215	ENST00000619322	GGCT	O75223	188 aa	Known RBP	4.1	□□□□□ -1.75
CBWD3-215	ENST00000619322	AMT	P48728	403 aa		4.1	□□□□□ -1.75
CBWD3-215	ENST00000619322	TMEM267	Q0VDI3	215 aa	Predicted RBP	4.1	□□□□□ -1.75
CBWD3-215	ENST00000619322	TMEM183B	Q1AE95	376 aa		4.1	□□□□□ -1.75
CBWD3-215	ENST00000619322	C5orf64	Q2M2E5	130 aa		4.1	□□□□□ -1.75
CBWD3-215	ENST00000619322	CASC10	Q5T4H9	136 aa		4.1	□□□□□ -1.75
CBWD3-215	ENST00000619322	LINC01551	Q86U37	167 aa		4.1	□□□□□ -1.75
CBWD3-215	ENST00000619322	OR5C1	Q8NGR4	320 aa		4.1	□□□□□ -1.75
CBWD3-215	ENST00000619322	GNPNAT1	Q96EK6	184 aa	Predicted RBP	4.1	□□□□□ -1.75
CBWD3-215	ENST00000619322	GRAMD2B	Q96HH9	432 aa		4.1	□□□□□ -1.75
CBWD3-215	ENST00000619322	UHRF2	Q96PU4	802 aa		4.1	□□□□□ -1.75
CBWD3-215	ENST00000619322	RBKS	Q9H477	322 aa		4.1	□□□□□ -1.75
CBWD3-215	ENST00000619322	TACC2	O95359	2948 aa		4.1	□□□□□ -1.75
CBWD3-215	ENST00000619322	MDFIC2	A0A1B0GVS7	189 aa		4.1	□□□□□ -1.75
CBWD3-215	ENST00000619322	MT-CO2	P00403	227 aa		4.1	□□□□□ -1.75
CBWD3-215	ENST00000619322	PPBP	P02775	128 aa		4.1	□□□□□ -1.75
CBWD3-215	ENST00000619322	RPL30	P62888	115 aa	Known RBP	4.1	□□□□□ -1.75
CBWD3-215	ENST00000619322	MORN2	Q502X0	79 aa		4.1	□□□□□ -1.75
CBWD3-215	ENST00000619322	LGALS9C	Q6DKI2	356 aa		4.1	□□□□□ -1.75
CBWD3-215	ENST00000619322	HIST2H2BD	Q6DRA6	164 aa		4.1	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms