RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 ATP5SQ99766 215 aa6.01□□□□□ -1.45
NEK3-209ENST00000618856 MED28Q9H204 178 aa6.01□□□□□ -1.45
NEK3-209ENST00000618856 PXMP4Q9Y6I8 212 aa6.01□□□□□ -1.45
NEK3-209ENST00000618856 AGRNO00468 2067 aa6□□□□□ -1.45
NEK3-209ENST00000618856 J3QL48 77 aa6□□□□□ -1.45
NEK3-209ENST00000618856 COX7A2P2O60397 106 aa6□□□□□ -1.45
NEK3-209ENST00000618856 ZNF253O75346 499 aa6□□□□□ -1.45
NEK3-209ENST00000618856 CA1P00915 261 aaPredicted RBP6□□□□□ -1.45
NEK3-209ENST00000618856 DEFB1P60022 68 aa6□□□□□ -1.45
NEK3-209ENST00000618856 Q5BKY6 102 aa6□□□□□ -1.45
NEK3-209ENST00000618856 AMTNQ6UX39 209 aa6□□□□□ -1.45
NEK3-209ENST00000618856 BPIFA4PQ86YQ2 179 aa6□□□□□ -1.45
NEK3-209ENST00000618856 ZNF709Q8N972 641 aa6□□□□□ -1.45
NEK3-209ENST00000618856 THAP6Q8TBB0 222 aa6□□□□□ -1.45
NEK3-209ENST00000618856 C16orf92Q96LL3 132 aa6□□□□□ -1.45
NEK3-209ENST00000618856 AQP10Q96PS8 301 aa6□□□□□ -1.45
NEK3-209ENST00000618856 C11orf68Q9H3H3 251 aaKnown RBP6□□□□□ -1.45
NEK3-209ENST00000618856 HRH4Q9H3N8 390 aa6□□□□□ -1.45
NEK3-209ENST00000618856 WFDC1Q9HC57 220 aa6□□□□□ -1.45
NEK3-209ENST00000618856 ZNF331Q9NQX6 463 aaPredicted RBP6□□□□□ -1.45
NEK3-209ENST00000618856 TMEM14CQ9P0S9 112 aa6□□□□□ -1.45
NEK3-209ENST00000618856 X6R8D5 127 aa6□□□□□ -1.45
NEK3-209ENST00000618856 TRAV5A0A0B4J249 113 aa5.99□□□□□ -1.45
NEK3-209ENST00000618856 H3BQ15 152 aa5.99□□□□□ -1.45
NEK3-209ENST00000618856 FGL1Q08830 312 aa5.99□□□□□ -1.45
NEK3-209ENST00000618856 CLINT1Q14677 625 aa5.99□□□□□ -1.45
NEK3-209ENST00000618856 GUK1Q16774 197 aa5.99□□□□□ -1.45
NEK3-209ENST00000618856 GCSAMLQ5JQS6 135 aa5.99□□□□□ -1.45
NEK3-209ENST00000618856 LCN15Q6UWW0 184 aa5.99□□□□□ -1.45
NEK3-209ENST00000618856 ZNF705AQ6ZN79 300 aaPredicted RBP5.99□□□□□ -1.45
NEK3-209ENST00000618856 Q8NAQ8 132 aa5.99□□□□□ -1.45
NEK3-209ENST00000618856 FAM167A-AS1Q96KT0 104 aa5.99□□□□□ -1.45
NEK3-209ENST00000618856 LINC00052Q96N35 136 aa5.99□□□□□ -1.45
NEK3-209ENST00000618856 RARRES2Q99969 163 aa5.99□□□□□ -1.45
NEK3-209ENST00000618856 KCNIP2Q9NS61 270 aa5.99□□□□□ -1.45
NEK3-209ENST00000618856 RPRMQ9NS64 109 aa5.99□□□□□ -1.45
NEK3-209ENST00000618856 A0A0J9YWU9 116 aa5.98□□□□□ -1.45
NEK3-209ENST00000618856 ZNF705FA8MVS1 300 aaPredicted RBP5.98□□□□□ -1.45
NEK3-209ENST00000618856 F6UB75 175 aa5.98□□□□□ -1.45
NEK3-209ENST00000618856 ZNF705DP0CH99 300 aaPredicted RBP5.98□□□□□ -1.45
NEK3-209ENST00000618856 ZNF705BP0CI00 300 aaPredicted RBP5.98□□□□□ -1.45
NEK3-209ENST00000618856 NUTF2P61970 127 aaKnown RBP5.98□□□□□ -1.45
NEK3-209ENST00000618856 PSG3Q16557 428 aa5.98□□□□□ -1.45
NEK3-209ENST00000618856 IGFL4Q6B9Z1 124 aa5.98□□□□□ -1.45
NEK3-209ENST00000618856 RNF182Q8N6D2 247 aa5.98□□□□□ -1.45
NEK3-209ENST00000618856 OR11H2Q8NH07 326 aa5.98□□□□□ -1.45
NEK3-209ENST00000618856 IL17DQ8TAD2 202 aa5.98□□□□□ -1.45
NEK3-209ENST00000618856 NEU1Q99519 415 aa5.98□□□□□ -1.45
NEK3-209ENST00000618856 SLC50A1Q9BRV3 221 aa5.98□□□□□ -1.45
NEK3-209ENST00000618856 C1QTNF4Q9BXJ3 329 aa5.98□□□□□ -1.45
NEK3-209ENST00000618856 ZNF586Q9NXT0 402 aa5.98□□□□□ -1.45
NEK3-209ENST00000618856 CLEC5AQ9NY25 188 aa5.98□□□□□ -1.45
NEK3-209ENST00000618856 DNAH6Q9C0G6 4158 aa5.98□□□□□ -1.45
NEK3-209ENST00000618856 TRBV19A0A075B6N1 114 aa5.97□□□□□ -1.45
NEK3-209ENST00000618856 RNF222A6NCQ9 220 aa5.97□□□□□ -1.45
NEK3-209ENST00000618856 C17orf112F2Z3M2 114 aa5.97□□□□□ -1.45
NEK3-209ENST00000618856 SLC17A3O00476 420 aa5.97□□□□□ -1.45
NEK3-209ENST00000618856 CRXO43186 299 aaPredicted RBP5.97□□□□□ -1.45
NEK3-209ENST00000618856 NDUFB4O95168 129 aa5.97□□□□□ -1.45
NEK3-209ENST00000618856 MIFP14174 115 aa5.97□□□□□ -1.45
NEK3-209ENST00000618856 HLA-DMBP28068 263 aa5.97□□□□□ -1.45
NEK3-209ENST00000618856 CNN1P51911 297 aaKnown RBP5.97□□□□□ -1.45
NEK3-209ENST00000618856 PSG9Q00887 426 aa5.97□□□□□ -1.45
NEK3-209ENST00000618856 PDE6HQ13956 83 aa5.97□□□□□ -1.45
NEK3-209ENST00000618856 FAM78BQ5VT40 261 aa5.97□□□□□ -1.45
NEK3-209ENST00000618856 EBLN2Q6P2I7 272 aa5.97□□□□□ -1.45
NEK3-209ENST00000618856 MIR17HGQ75NE6 70 aa5.97□□□□□ -1.45
NEK3-209ENST00000618856 OR2G3Q8NGZ4 309 aa5.97□□□□□ -1.45
NEK3-209ENST00000618856 MRPL53Q96EL3 112 aaKnown RBP5.97□□□□□ -1.45
NEK3-209ENST00000618856 SLC25A2Q9BXI2 301 aa5.97□□□□□ -1.45
NEK3-209ENST00000618856 MRPL32Q9BYC8 188 aaKnown RBP5.97□□□□□ -1.45
NEK3-209ENST00000618856 TNFSF18Q9UNG2 199 aa5.97□□□□□ -1.45
NEK3-209ENST00000618856 FUT9Q9Y231 359 aa5.97□□□□□ -1.45
NEK3-209ENST00000618856 TIMM9Q9Y5J7 89 aa5.97□□□□□ -1.45
NEK3-209ENST00000618856 DUSP14O95147 198 aaKnown RBP5.96□□□□□ -1.46
NEK3-209ENST00000618856 RBMY1A1P0DJD3 496 aaKnown RBP5.96□□□□□ -1.46
NEK3-209ENST00000618856 RBMY1CP0DJD4 496 aa5.96□□□□□ -1.46
NEK3-209ENST00000618856 HIST1H1EP10412 219 aaKnown RBP5.96□□□□□ -1.46
NEK3-209ENST00000618856 RBMY1FQ15415 496 aaKnown RBP5.96□□□□□ -1.46
NEK3-209ENST00000618856 OR8A1Q8NGG7 326 aa5.96□□□□□ -1.46
NEK3-209ENST00000618856 FXYD5Q96DB9 178 aa5.96□□□□□ -1.46
NEK3-209ENST00000618856 ZNF503Q96F45 646 aa5.96□□□□□ -1.46
NEK3-209ENST00000618856 SMIM3Q9BZL3 60 aa5.96□□□□□ -1.46
NEK3-209ENST00000618856 SLC35B3Q9H1N7 401 aa5.96□□□□□ -1.46
NEK3-209ENST00000618856 XCL2Q9UBD3 114 aa5.96□□□□□ -1.46
NEK3-209ENST00000618856 IGHV4-28A0A0C4DH34 117 aa5.95□□□□□ -1.46
NEK3-209ENST00000618856 SMIM9A6NGZ8 99 aa5.95□□□□□ -1.46
NEK3-209ENST00000618856 PRAC2D3DTV9 90 aa5.95□□□□□ -1.46
NEK3-209ENST00000618856 IFNA5P01569 189 aa5.95□□□□□ -1.46
NEK3-209ENST00000618856 AMBPP02760 352 aa5.95□□□□□ -1.46
NEK3-209ENST00000618856 PYYP10082 97 aa5.95□□□□□ -1.46
NEK3-209ENST00000618856 ZNF266Q14584 549 aa5.95□□□□□ -1.46
NEK3-209ENST00000618856 C1orf158Q8N1D5 194 aa5.95□□□□□ -1.46
NEK3-209ENST00000618856 OR2T35Q8NGX2 323 aa5.95□□□□□ -1.46
NEK3-209ENST00000618856 SCGB1C1Q8TD33 95 aa5.95□□□□□ -1.46
NEK3-209ENST00000618856 RPUSD4Q96CM3 377 aaKnown RBP5.95□□□□□ -1.46
NEK3-209ENST00000618856 IGF2BP2-AS1Q96M15 143 aa5.95□□□□□ -1.46
NEK3-209ENST00000618856 PSMG3Q9BT73 122 aaPredicted RBP5.95□□□□□ -1.46
NEK3-209ENST00000618856 RFNGQ9Y644 331 aa5.95□□□□□ -1.46
NEK3-209ENST00000618856 DNAH2Q9P225 4427 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms