RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 C2orf82Q6UX34 121 aa9.14□□□□□ -0.95
CCDC144B-208ENST00000618081 SNHG12Q9BXW3 62 aa9.14□□□□□ -0.95
CCDC144B-208ENST00000618081 IGKV1-9A0A0C4DH69 117 aa9.14□□□□□ -0.95
CCDC144B-208ENST00000618081 PSPNO60542 156 aa9.14□□□□□ -0.95
CCDC144B-208ENST00000618081 DEFB130BP0DP73 79 aa9.14□□□□□ -0.95
CCDC144B-208ENST00000618081 DEFB130AP0DP74 79 aa9.14□□□□□ -0.95
CCDC144B-208ENST00000618081 ZMAT4Q9H898 229 aa9.14□□□□□ -0.95
CCDC144B-208ENST00000618081 SIGLEC9Q9Y336 463 aa9.14□□□□□ -0.95
CCDC144B-208ENST00000618081 TET2Q6N021 2002 aaPredicted RBP9.14□□□□□ -0.95
CCDC144B-208ENST00000618081 CHAC1Q9BUX1 264 aa9.14□□□□□ -0.95
CCDC144B-208ENST00000618081 FAM208BQ5VWN6 2430 aa9.14□□□□□ -0.95
CCDC144B-208ENST00000618081 PCNX3Q9H6A9 2034 aa9.14□□□□□ -0.95
CCDC144B-208ENST00000618081 CGB3P0DN86 165 aa9.14□□□□□ -0.95
CCDC144B-208ENST00000618081 PRIMA1Q86XR5 153 aa9.14□□□□□ -0.95
CCDC144B-208ENST00000618081 GAGE2BQ13066 116 aa9.13□□□□□ -0.95
CCDC144B-208ENST00000618081 LYZL1Q6UWQ5 148 aa9.13□□□□□ -0.95
CCDC144B-208ENST00000618081 F5H768 121 aa9.13□□□□□ -0.95
CCDC144B-208ENST00000618081 F8VVB4 439 aa9.13□□□□□ -0.95
CCDC144B-208ENST00000618081 F8VWA3 439 aa9.13□□□□□ -0.95
CCDC144B-208ENST00000618081 H3BMM0 161 aa9.13□□□□□ -0.95
CCDC144B-208ENST00000618081 TRAV8-1A0A0A6YYK1 113 aa9.13□□□□□ -0.95
CCDC144B-208ENST00000618081 ZNF319Q9P2F9 582 aa9.13□□□□□ -0.95
CCDC144B-208ENST00000618081 ID3Q02535 119 aa9.13□□□□□ -0.95
CCDC144B-208ENST00000618081 TRPT1Q86TN4 253 aaKnown RBP9.13□□□□□ -0.95
CCDC144B-208ENST00000618081 TRAV13-1A0A0B4J241 112 aa9.13□□□□□ -0.95
CCDC144B-208ENST00000618081 TRAV5A0A0B4J249 113 aa9.13□□□□□ -0.95
CCDC144B-208ENST00000618081 TNFRSF6BO95407 300 aa9.13□□□□□ -0.95
CCDC144B-208ENST00000618081 C1QL4Q86Z23 238 aa9.13□□□□□ -0.95
CCDC144B-208ENST00000618081 TMEM126AQ9H061 195 aa9.13□□□□□ -0.95
CCDC144B-208ENST00000618081 TRBV25-1A0A075B6N4 114 aa9.13□□□□□ -0.95
CCDC144B-208ENST00000618081 NCR2O95944 276 aa9.13□□□□□ -0.95
CCDC144B-208ENST00000618081 A0A0A6YYD4 124 aa9.12□□□□□ -0.95
CCDC144B-208ENST00000618081 THAP8Q8NA92 274 aa9.12□□□□□ -0.95
CCDC144B-208ENST00000618081 WDR83OSQ9Y284 106 aa9.12□□□□□ -0.95
CCDC144B-208ENST00000618081 C14orf178Q8N769 122 aaPredicted RBP9.12□□□□□ -0.95
CCDC144B-208ENST00000618081 BPESC1Q9GZL8 116 aa9.12□□□□□ -0.95
CCDC144B-208ENST00000618081 FNDC10F2Z333 226 aa9.12□□□□□ -0.95
CCDC144B-208ENST00000618081 HIST1H2BKO60814 126 aa9.12□□□□□ -0.95
CCDC144B-208ENST00000618081 HIST1H2BJP06899 126 aa9.12□□□□□ -0.95
CCDC144B-208ENST00000618081 CRYGSP22914 178 aa9.12□□□□□ -0.95
CCDC144B-208ENST00000618081 HIST1H2BOP23527 126 aa9.12□□□□□ -0.95
CCDC144B-208ENST00000618081 HIST1H2BBP33778 126 aa9.12□□□□□ -0.95
CCDC144B-208ENST00000618081 HIST1H2BDP58876 126 aa9.12□□□□□ -0.95
CCDC144B-208ENST00000618081 HIST1H2BCP62807 126 aa9.12□□□□□ -0.95
CCDC144B-208ENST00000618081 HIST2H2BEQ16778 126 aa9.12□□□□□ -0.95
CCDC144B-208ENST00000618081 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.12□□□□□ -0.95
CCDC144B-208ENST00000618081 LY6G5BQ8NDX9 201 aa9.12□□□□□ -0.95
CCDC144B-208ENST00000618081 HIST1H2BHQ93079 126 aa9.12□□□□□ -0.95
CCDC144B-208ENST00000618081 HIST1H2BNQ99877 126 aa9.12□□□□□ -0.95
CCDC144B-208ENST00000618081 HIST1H2BMQ99879 126 aa9.12□□□□□ -0.95
CCDC144B-208ENST00000618081 TCRAP04437 139 aa9.12□□□□□ -0.95
CCDC144B-208ENST00000618081 MSMBP08118 114 aa9.12□□□□□ -0.95
CCDC144B-208ENST00000618081 RHPN1-AS1Q9BWJ2 59 aa9.12□□□□□ -0.95
CCDC144B-208ENST00000618081 RHODO00212 210 aa9.12□□□□□ -0.95
CCDC144B-208ENST00000618081 CSRP3P50461 194 aa9.12□□□□□ -0.95
CCDC144B-208ENST00000618081 LIME1Q9H400 295 aa9.12□□□□□ -0.95
CCDC144B-208ENST00000618081 NUP35Q8NFH5 326 aa9.11□□□□□ -0.95
CCDC144B-208ENST00000618081 AGMATQ9BSE5 352 aa9.11□□□□□ -0.95
CCDC144B-208ENST00000618081 MCRIP2Q9BUT9 160 aaKnown RBP9.11□□□□□ -0.95
CCDC144B-208ENST00000618081 PKIGQ9Y2B9 76 aa9.11□□□□□ -0.95
CCDC144B-208ENST00000618081 SELENOKQ9Y6D0 94 aa9.11□□□□□ -0.95
CCDC144B-208ENST00000618081 KLF17Q5JT82 389 aaPredicted RBP9.11□□□□□ -0.95
CCDC144B-208ENST00000618081 ESDP10768 282 aa9.11□□□□□ -0.95
CCDC144B-208ENST00000618081 Q5PR19 223 aa9.11□□□□□ -0.95
CCDC144B-208ENST00000618081 TRAV1-1A0A0B4J248 108 aa9.11□□□□□ -0.95
CCDC144B-208ENST00000618081 LINC01619G3V211 115 aa9.11□□□□□ -0.95
CCDC144B-208ENST00000618081 CGB7P0DN87 165 aa9.11□□□□□ -0.95
CCDC144B-208ENST00000618081 LHFPL4Q7Z7J7 247 aa9.11□□□□□ -0.95
CCDC144B-208ENST00000618081 ZNF329Q86UD4 541 aa9.11□□□□□ -0.95
CCDC144B-208ENST00000618081 MBD3L4A6NDZ8 208 aaPredicted RBP9.11□□□□□ -0.95
CCDC144B-208ENST00000618081 MBD3L3A6NE82 208 aaPredicted RBP9.11□□□□□ -0.95
CCDC144B-208ENST00000618081 MBD3L5A6NJ08 208 aaPredicted RBP9.11□□□□□ -0.95
CCDC144B-208ENST00000618081 MBD3L2Q8NHZ7 208 aaPredicted RBP9.11□□□□□ -0.95
CCDC144B-208ENST00000618081 VWCEQ96DN2 955 aa9.11□□□□□ -0.95
CCDC144B-208ENST00000618081 LTBP1Q14766 1721 aa9.11□□□□□ -0.95
CCDC144B-208ENST00000618081 SHISA3A0PJX4 238 aa9.11□□□□□ -0.95
CCDC144B-208ENST00000618081 TBX6O95947 436 aaPredicted RBP9.11□□□□□ -0.95
CCDC144B-208ENST00000618081 SYNJ2BPP57105 145 aa9.11□□□□□ -0.95
CCDC144B-208ENST00000618081 CD177Q8N6Q3 437 aa9.11□□□□□ -0.95
CCDC144B-208ENST00000618081 J3QRE1 110 aa9.1□□□□□ -0.95
CCDC144B-208ENST00000618081 FLVCR1-AS1Q8TAF5 88 aa9.1□□□□□ -0.95
CCDC144B-208ENST00000618081 FGFBP3Q8TAT2 258 aa9.1□□□□□ -0.95
CCDC144B-208ENST00000618081 NDUFAF3Q9BU61 184 aa9.1□□□□□ -0.95
CCDC144B-208ENST00000618081 CT83Q5H943 113 aa9.1□□□□□ -0.95
CCDC144B-208ENST00000618081 GAFA1Q96PS6 74 aa9.1□□□□□ -0.95
CCDC144B-208ENST00000618081 SPXQ9BT56 116 aa9.1□□□□□ -0.95
CCDC144B-208ENST00000618081 IL17RELQ6ZVW7 336 aa9.1□□□□□ -0.95
CCDC144B-208ENST00000618081 PCDH15Q96QU1 1955 aa9.1□□□□□ -0.95
CCDC144B-208ENST00000618081 SSBP2P81877 361 aaPredicted RBP9.1□□□□□ -0.95
CCDC144B-208ENST00000618081 BCL6BQ8N143 479 aaPredicted RBP9.1□□□□□ -0.95
CCDC144B-208ENST00000618081 PAQR4Q8N4S7 273 aaPredicted RBP9.1□□□□□ -0.95
CCDC144B-208ENST00000618081 NEUROG3Q9Y4Z2 214 aa9.1□□□□□ -0.95
CCDC144B-208ENST00000618081 A0A087WWL8 130 aa9.09□□□□□ -0.95
CCDC144B-208ENST00000618081 NDUFB8O95169 186 aa9.09□□□□□ -0.95
CCDC144B-208ENST00000618081 Q8TAT8 98 aa9.09□□□□□ -0.95
CCDC144B-208ENST00000618081 NABP1Q96AH0 204 aa9.09□□□□□ -0.95
CCDC144B-208ENST00000618081 LHBP01229 141 aa9.09□□□□□ -0.95
CCDC144B-208ENST00000618081 INAFM2P0DMQ5 153 aa9.09□□□□□ -0.95
CCDC144B-208ENST00000618081 ZNF114Q8NC26 417 aa9.09□□□□□ -0.95
CCDC144B-208ENST00000618081 MSRB2Q9Y3D2 182 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms