RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 VAMP3Q15836 100 aa8.68□□□□□ -1.02
POLR2A-209ENST00000617998 CD300EQ496F6 205 aaPredicted RBP8.67□□□□□ -1.02
POLR2A-209ENST00000617998 FAM110AQ9BQ89 295 aa8.67□□□□□ -1.02
POLR2A-209ENST00000617998 ALX4Q9H161 411 aaPredicted RBP8.67□□□□□ -1.02
POLR2A-209ENST00000617998 PSG8Q9UQ74 426 aa8.67□□□□□ -1.02
POLR2A-209ENST00000617998 U3KQK5 164 aa8.67□□□□□ -1.02
POLR2A-209ENST00000617998 DSCAMO60469 2012 aa8.67□□□□□ -1.02
POLR2A-209ENST00000617998 TRBV25-1A0A075B6N4 114 aa8.67□□□□□ -1.02
POLR2A-209ENST00000617998 TMEM50AO95807 157 aa8.67□□□□□ -1.02
POLR2A-209ENST00000617998 ANGP03950 147 aaKnown RBP8.67□□□□□ -1.02
POLR2A-209ENST00000617998 IRF3Q14653 427 aa8.67□□□□□ -1.02
POLR2A-209ENST00000617998 S100A7L2Q5SY68 101 aa8.67□□□□□ -1.02
POLR2A-209ENST00000617998 IGFL4Q6B9Z1 124 aa8.67□□□□□ -1.02
POLR2A-209ENST00000617998 ITGB1BP1O14713 200 aa8.67□□□□□ -1.02
POLR2A-209ENST00000617998 DHRS11Q6UWP2 260 aa8.67□□□□□ -1.02
POLR2A-209ENST00000617998 C1orf159Q96HA4 380 aa8.67□□□□□ -1.02
POLR2A-209ENST00000617998 F8WEM9 126 aa8.67□□□□□ -1.02
POLR2A-209ENST00000617998 RHODO00212 210 aa8.67□□□□□ -1.02
POLR2A-209ENST00000617998 ZNF833PQ6ZTB9 187 aa8.67□□□□□ -1.02
POLR2A-209ENST00000617998 SH2D6Q7Z4S9 175 aa8.67□□□□□ -1.02
POLR2A-209ENST00000617998 CBY1Q9Y3M2 126 aa8.67□□□□□ -1.02
POLR2A-209ENST00000617998 C5orf63A6NC05 138 aa8.67□□□□□ -1.02
POLR2A-209ENST00000617998 DEFB125Q8N687 156 aa8.67□□□□□ -1.02
POLR2A-209ENST00000617998 RBMY1BA6NDE4 496 aaKnown RBP8.66□□□□□ -1.02
POLR2A-209ENST00000617998 RBMY1EA6NEQ0 496 aaKnown RBP8.66□□□□□ -1.02
POLR2A-209ENST00000617998 RBMY1DP0C7P1 496 aaKnown RBP8.66□□□□□ -1.02
POLR2A-209ENST00000617998 RBMY1A1P0DJD3 496 aaKnown RBP8.66□□□□□ -1.02
POLR2A-209ENST00000617998 RBMY1CP0DJD4 496 aa8.66□□□□□ -1.02
POLR2A-209ENST00000617998 CBLN1P23435 193 aa8.66□□□□□ -1.02
POLR2A-209ENST00000617998 C6orf226Q5I0X4 101 aa8.66□□□□□ -1.02
POLR2A-209ENST00000617998 Q6ZWC4 215 aa8.66□□□□□ -1.02
POLR2A-209ENST00000617998 RPP25LQ8N5L8 163 aaKnown RBP8.66□□□□□ -1.02
POLR2A-209ENST00000617998 RAB37Q96AX2 223 aa8.66□□□□□ -1.02
POLR2A-209ENST00000617998 ATP6V0BQ99437 205 aa8.66□□□□□ -1.02
POLR2A-209ENST00000617998 TSC2P49815 1807 aa8.66□□□□□ -1.02
POLR2A-209ENST00000617998 GHRHP01286 108 aa8.66□□□□□ -1.02
POLR2A-209ENST00000617998 TFF3Q07654 80 aa8.66□□□□□ -1.02
POLR2A-209ENST00000617998 C4orf48Q5BLP8 95 aa8.66□□□□□ -1.02
POLR2A-209ENST00000617998 CST9LQ9H4G1 147 aa8.66□□□□□ -1.02
POLR2A-209ENST00000617998 TRAV5A0A0B4J249 113 aa8.66□□□□□ -1.02
POLR2A-209ENST00000617998 OXLD1Q5BKU9 147 aa8.66□□□□□ -1.02
POLR2A-209ENST00000617998 NKAPP1Q8N9T2 125 aa8.66□□□□□ -1.02
POLR2A-209ENST00000617998 IGFBPL1Q8WX77 278 aa8.66□□□□□ -1.02
POLR2A-209ENST00000617998 SMPXQ9UHP9 88 aa8.66□□□□□ -1.02
POLR2A-209ENST00000617998 C1QBP02746 253 aa8.66□□□□□ -1.02
POLR2A-209ENST00000617998 CD74P04233 296 aa8.66□□□□□ -1.02
POLR2A-209ENST00000617998 IGFBP3P17936 291 aaPredicted RBP8.66□□□□□ -1.02
POLR2A-209ENST00000617998 C17orf58Q2M2W7 97 aa8.66□□□□□ -1.02
POLR2A-209ENST00000617998 TTC32Q5I0X7 151 aa8.66□□□□□ -1.02
POLR2A-209ENST00000617998 FOXI2Q6ZQN5 318 aa8.66□□□□□ -1.02
POLR2A-209ENST00000617998 ISOC2Q96AB3 205 aa8.66□□□□□ -1.02
POLR2A-209ENST00000617998 ESM1Q9NQ30 184 aa8.66□□□□□ -1.02
POLR2A-209ENST00000617998 TRAV12-2A0A075B6T6 113 aa8.66□□□□□ -1.02
POLR2A-209ENST00000617998 OR2K2Q8NGT1 345 aa8.66□□□□□ -1.02
POLR2A-209ENST00000617998 ANKHD1Q8IWZ3 2542 aaKnown RBP8.66□□□□□ -1.02
POLR2A-209ENST00000617998 GCSAMLQ5JQS6 135 aa8.65□□□□□ -1.02
POLR2A-209ENST00000617998 PHF3Q92576 2039 aaKnown RBP8.65□□□□□ -1.02
POLR2A-209ENST00000617998 A0A1W2PPI3 338 aa8.65□□□□□ -1.02
POLR2A-209ENST00000617998 TMEM89A2RUT3 159 aa8.65□□□□□ -1.02
POLR2A-209ENST00000617998 H3BMM0 161 aa8.65□□□□□ -1.02
POLR2A-209ENST00000617998 M0R2N4 97 aa8.65□□□□□ -1.02
POLR2A-209ENST00000617998 OTX1P32242 354 aaPredicted RBP8.65□□□□□ -1.02
POLR2A-209ENST00000617998 UBE2WQ96B02 151 aa8.65□□□□□ -1.02
POLR2A-209ENST00000617998 C8orf49Q96NF6 230 aa8.65□□□□□ -1.02
POLR2A-209ENST00000617998 TRAV3A0A0B4J244 114 aa8.65□□□□□ -1.02
POLR2A-209ENST00000617998 PNRC1Q12796 327 aaPredicted RBP8.65□□□□□ -1.02
POLR2A-209ENST00000617998 C7orf71A4D174 169 aa8.65□□□□□ -1.03
POLR2A-209ENST00000617998 NTF4P34130 210 aa8.65□□□□□ -1.03
POLR2A-209ENST00000617998 FREM1Q5H8C1 2179 aa8.65□□□□□ -1.03
POLR2A-209ENST00000617998 SFTA3P0C7M3 94 aa8.65□□□□□ -1.03
POLR2A-209ENST00000617998 C5orf56Q8N8D9 126 aa8.65□□□□□ -1.03
POLR2A-209ENST00000617998 JPT2Q9H910 190 aa8.65□□□□□ -1.03
POLR2A-209ENST00000617998 PYYP10082 97 aa8.64□□□□□ -1.03
POLR2A-209ENST00000617998 SPNP16150 400 aa8.64□□□□□ -1.03
POLR2A-209ENST00000617998 RNF138Q8WVD3 245 aa8.64□□□□□ -1.03
POLR2A-209ENST00000617998 FBLN5Q9UBX5 448 aa8.64□□□□□ -1.03
POLR2A-209ENST00000617998 SCGB3A1Q96QR1 104 aa8.64□□□□□ -1.03
POLR2A-209ENST00000617998 SIRPDQ9H106 197 aa8.64□□□□□ -1.03
POLR2A-209ENST00000617998 GNG5P63218 68 aa8.64□□□□□ -1.03
POLR2A-209ENST00000617998 LINC01006Q8NI28 216 aa8.64□□□□□ -1.03
POLR2A-209ENST00000617998 IGHV1OR15-1A0A075B7D0 117 aa8.64□□□□□ -1.03
POLR2A-209ENST00000617998 A6NDX4 124 aa8.64□□□□□ -1.03
POLR2A-209ENST00000617998 MED13Q9UHV7 2174 aa8.64□□□□□ -1.03
POLR2A-209ENST00000617998 H7C2G1 150 aa8.64□□□□□ -1.03
POLR2A-209ENST00000617998 ANXA2RQ3ZCQ2 193 aa8.64□□□□□ -1.03
POLR2A-209ENST00000617998 C16orf74Q96GX8 76 aa8.64□□□□□ -1.03
POLR2A-209ENST00000617998 AJUBAQ96IF1 538 aa8.64□□□□□ -1.03
POLR2A-209ENST00000617998 NIT2Q9NQR4 276 aa8.64□□□□□ -1.03
POLR2A-209ENST00000617998 TRBV7-9A0A0J9YWB2 115 aa8.63□□□□□ -1.03
POLR2A-209ENST00000617998 LINC00862A6NCI5 91 aa8.63□□□□□ -1.03
POLR2A-209ENST00000617998 LINC00158P58513 81 aa8.63□□□□□ -1.03
POLR2A-209ENST00000617998 RSPO3Q9BXY4 272 aaPredicted RBP8.63□□□□□ -1.03
POLR2A-209ENST00000617998 TMEM191AQ9H0A3 160 aa8.63□□□□□ -1.03
POLR2A-209ENST00000617998 ZFP30Q9Y2G7 519 aa8.63□□□□□ -1.03
POLR2A-209ENST00000617998 C1orf194Q5T5A4 169 aa8.63□□□□□ -1.03
POLR2A-209ENST00000617998 FAM89BQ8N5H3 189 aa8.63□□□□□ -1.03
POLR2A-209ENST00000617998 THAP8Q8NA92 274 aa8.63□□□□□ -1.03
POLR2A-209ENST00000617998 FANCD2OSQ96PS1 177 aa8.63□□□□□ -1.03
POLR2A-209ENST00000617998 ZFYVE26Q68DK2 2539 aa8.63□□□□□ -1.03
POLR2A-209ENST00000617998 COX6CP09669 75 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms