RNA–Protein interactions for RNA: ENST00000617617.4

PDPN-211, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 2,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-211ENST00000617617 C8orf86Q6ZUL3 223 aa8.91□□□□□ -0.98
PDPN-211ENST00000617617 DPF1Q92782 380 aa8.91□□□□□ -0.98
PDPN-211ENST00000617617 TREM1Q9NP99 234 aa8.91□□□□□ -0.98
PDPN-211ENST00000617617 ZNF785A8K8V0 405 aa8.91□□□□□ -0.98
PDPN-211ENST00000617617 SFTA3P0C7M3 94 aa8.91□□□□□ -0.98
PDPN-211ENST00000617617 OR9G4Q8NGQ1 327 aa8.91□□□□□ -0.98
PDPN-211ENST00000617617 HIST1H2BAQ96A08 127 aa8.91□□□□□ -0.98
PDPN-211ENST00000617617 ATF4P18848 351 aaPredicted RBP8.9□□□□□ -0.98
PDPN-211ENST00000617617 TM4SF20Q53R12 229 aa8.9□□□□□ -0.98
PDPN-211ENST00000617617 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.9□□□□□ -0.98
PDPN-211ENST00000617617 RHPN1-AS1Q9BWJ2 59 aa8.9□□□□□ -0.98
PDPN-211ENST00000617617 SERTM2A0A1B0GWG4 89 aa8.9□□□□□ -0.98
PDPN-211ENST00000617617 SOCS3O14543 225 aa8.9□□□□□ -0.98
PDPN-211ENST00000617617 S100A9P06702 114 aaKnown RBP8.9□□□□□ -0.98
PDPN-211ENST00000617617 ADCYAP1P18509 176 aa8.9□□□□□ -0.98
PDPN-211ENST00000617617 ATP5G3P48201 142 aa8.9□□□□□ -0.98
PDPN-211ENST00000617617 SLURP1P55000 103 aa8.9□□□□□ -0.98
PDPN-211ENST00000617617 LINC00469Q8N7U9 141 aa8.9□□□□□ -0.98
PDPN-211ENST00000617617 C5orf17Q8NAS9 161 aa8.9□□□□□ -0.98
PDPN-211ENST00000617617 Q9H3A6 140 aa8.9□□□□□ -0.98
PDPN-211ENST00000617617 ZNF320A2RRD8 509 aa8.9□□□□□ -0.99
PDPN-211ENST00000617617 CBLN1P23435 193 aa8.9□□□□□ -0.99
PDPN-211ENST00000617617 SYNJ2BPP57105 145 aa8.9□□□□□ -0.99
PDPN-211ENST00000617617 ZNF331Q9NQX6 463 aaPredicted RBP8.9□□□□□ -0.99
PDPN-211ENST00000617617 KLF12Q9Y4X4 402 aa8.9□□□□□ -0.99
PDPN-211ENST00000617617 HAX1O00165 279 aa8.89□□□□□ -0.99
PDPN-211ENST00000617617 CSN3P07498 182 aa8.89□□□□□ -0.99
PDPN-211ENST00000617617 UBE2G2P60604 165 aa8.89□□□□□ -0.99
PDPN-211ENST00000617617 CST9LP1Q5W188 147 aa8.89□□□□□ -0.99
PDPN-211ENST00000617617 C2CD4CQ8TF44 421 aa8.89□□□□□ -0.99
PDPN-211ENST00000617617 LY96Q9Y6Y9 160 aa8.89□□□□□ -0.99
PDPN-211ENST00000617617 FBLL1A6NHQ2 334 aaKnown RBP8.89□□□□□ -0.99
PDPN-211ENST00000617617 DEFB136Q30KP8 78 aa8.89□□□□□ -0.99
PDPN-211ENST00000617617 ADAMTSL5Q6ZMM2 481 aa8.89□□□□□ -0.99
PDPN-211ENST00000617617 PRIMA1Q86XR5 153 aa8.89□□□□□ -0.99
PDPN-211ENST00000617617 CYB561D1Q8N8Q1 229 aa8.89□□□□□ -0.99
PDPN-211ENST00000617617 DLX4Q92988 240 aaPredicted RBP8.89□□□□□ -0.99
PDPN-211ENST00000617617 LINC00052Q96N35 136 aa8.89□□□□□ -0.99
PDPN-211ENST00000617617 ZNF747Q9BV97 191 aa8.89□□□□□ -0.99
PDPN-211ENST00000617617 IGHV3OR16-8A0A075B7F1 116 aa8.88□□□□□ -0.99
PDPN-211ENST00000617617 ZNF207O43670 478 aaKnown RBP8.88□□□□□ -0.99
PDPN-211ENST00000617617 KRTAP24-1Q3LI83 254 aa8.88□□□□□ -0.99
PDPN-211ENST00000617617 KHDC1LQ5JSQ8 128 aa8.88□□□□□ -0.99
PDPN-211ENST00000617617 SMIM12Q96EX1 92 aa8.88□□□□□ -0.99
PDPN-211ENST00000617617 EPDR1Q9UM22 224 aa8.88□□□□□ -0.99
PDPN-211ENST00000617617 TRAV25A0A0B4J276 109 aa8.88□□□□□ -0.99
PDPN-211ENST00000617617 PCP4L1A6NKN8 68 aa8.88□□□□□ -0.99
PDPN-211ENST00000617617 C9JCJ5 164 aa8.88□□□□□ -0.99
PDPN-211ENST00000617617 SRSF2Q01130 221 aaKnown RBP8.88□□□□□ -0.99
PDPN-211ENST00000617617 SOHLH1Q5JUK2 328 aa8.88□□□□□ -0.99
PDPN-211ENST00000617617 OR2K2Q8NGT1 345 aa8.88□□□□□ -0.99
PDPN-211ENST00000617617 ATG101Q9BSB4 218 aa8.88□□□□□ -0.99
PDPN-211ENST00000617617 MLXQ9UH92 298 aa8.88□□□□□ -0.99
PDPN-211ENST00000617617 RBAKDNA6NC62 111 aa8.87□□□□□ -0.99
PDPN-211ENST00000617617 M0QZ24 198 aa8.87□□□□□ -0.99
PDPN-211ENST00000617617 SLC17A3O00476 420 aa8.87□□□□□ -0.99
PDPN-211ENST00000617617 FOLR2P14207 255 aa8.87□□□□□ -0.99
PDPN-211ENST00000617617 TAS2R60P59551 318 aa8.87□□□□□ -0.99
PDPN-211ENST00000617617 BLNKQ8WV28 456 aa8.87□□□□□ -0.99
PDPN-211ENST00000617617 AAMDCQ9H7C9 122 aa8.87□□□□□ -0.99
PDPN-211ENST00000617617 NRN1Q9NPD7 142 aa8.87□□□□□ -0.99
PDPN-211ENST00000617617 C2CD3Q4AC94 2353 aa8.87□□□□□ -0.99
PDPN-211ENST00000617617 TRAV8-2A0A0B4J237 113 aa8.87□□□□□ -0.99
PDPN-211ENST00000617617 PEX7O00628 323 aa8.87□□□□□ -0.99
PDPN-211ENST00000617617 SUMO1P63165 101 aaKnown RBP8.87□□□□□ -0.99
PDPN-211ENST00000617617 LURAP1LQ8IV03 231 aa8.87□□□□□ -0.99
PDPN-211ENST00000617617 PGPA6NDG6 321 aa8.86□□□□□ -0.99
PDPN-211ENST00000617617 OVOL1O14753 267 aa8.86□□□□□ -0.99
PDPN-211ENST00000617617 RANP62826 216 aaKnown RBP8.86□□□□□ -0.99
PDPN-211ENST00000617617 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.86□□□□□ -0.99
PDPN-211ENST00000617617 TMEM75Q8N9X5 138 aa8.86□□□□□ -0.99
PDPN-211ENST00000617617 PPP1R14DQ9NXH3 145 aa8.86□□□□□ -0.99
PDPN-211ENST00000617617 SCO2A0A1W2PP80 73 aa8.86□□□□□ -0.99
PDPN-211ENST00000617617 F8W036 122 aa8.86□□□□□ -0.99
PDPN-211ENST00000617617 ISLRO14498 428 aa8.86□□□□□ -0.99
PDPN-211ENST00000617617 TCRAP04437 139 aa8.86□□□□□ -0.99
PDPN-211ENST00000617617 SLC25A5P05141 298 aaKnown RBP8.86□□□□□ -0.99
PDPN-211ENST00000617617 PNRC1Q12796 327 aaPredicted RBP8.86□□□□□ -0.99
PDPN-211ENST00000617617 TMEM183BQ1AE95 376 aa8.86□□□□□ -0.99
PDPN-211ENST00000617617 TCF24Q7RTU0 167 aa8.86□□□□□ -0.99
PDPN-211ENST00000617617 PARLQ9H300 379 aa8.86□□□□□ -0.99
PDPN-211ENST00000617617 LINC00482Q8N8I6 264 aa8.86□□□□□ -0.99
PDPN-211ENST00000617617 DCANP1Q8TF63 244 aa8.86□□□□□ -0.99
PDPN-211ENST00000617617 FMC1Q96HJ9 113 aa8.86□□□□□ -0.99
PDPN-211ENST00000617617 DIRC3C9JPN6 131 aa8.85□□□□□ -0.99
PDPN-211ENST00000617617 IGF2BP2-AS1Q96M15 143 aa8.85□□□□□ -0.99
PDPN-211ENST00000617617 NAT8Q9UHE5 227 aa8.85□□□□□ -0.99
PDPN-211ENST00000617617 TSPAN4O14817 238 aa8.85□□□□□ -0.99
PDPN-211ENST00000617617 EDN2P20800 178 aa8.85□□□□□ -0.99
PDPN-211ENST00000617617 COX8CQ7Z4L0 72 aa8.85□□□□□ -0.99
PDPN-211ENST00000617617 SVBPQ8N300 66 aa8.85□□□□□ -0.99
PDPN-211ENST00000617617 IGHV3-66A0A0C4DH42 116 aa8.84□□□□□ -0.99
PDPN-211ENST00000617617 A0A1W2PRX2 142 aa8.84□□□□□ -0.99
PDPN-211ENST00000617617 K7EQG2 157 aa8.84□□□□□ -0.99
PDPN-211ENST00000617617 DEFB114Q30KQ6 69 aa8.84□□□□□ -0.99
PDPN-211ENST00000617617 EXOC3-AS1Q8N2X6 119 aa8.84□□□□□ -0.99
PDPN-211ENST00000617617 C11orf44Q8N8P7 122 aa8.84□□□□□ -0.99
PDPN-211ENST00000617617 TMEM158Q8WZ71 300 aa8.84□□□□□ -0.99
PDPN-211ENST00000617617 SDF2L1Q9HCN8 221 aa8.84□□□□□ -0.99
PDPN-211ENST00000617617 IGHV3-49A0A0A0MS15 119 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms