RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 FAM78BQ5VT40 261 aa12.17□□□□□ -0.46
CBWD3-211ENST00000615061 BPIFA4PQ86YQ2 179 aa12.17□□□□□ -0.46
CBWD3-211ENST00000615061 OR1L4Q8NGR5 311 aa12.17□□□□□ -0.46
CBWD3-211ENST00000615061 PFDN5Q99471 154 aa12.17□□□□□ -0.46
CBWD3-211ENST00000615061 ATP5SQ99766 215 aa12.17□□□□□ -0.46
CBWD3-211ENST00000615061 DEFB4AO15263 64 aa12.16□□□□□ -0.46
CBWD3-211ENST00000615061 ZNF705DP0CH99 300 aaPredicted RBP12.16□□□□□ -0.46
CBWD3-211ENST00000615061 ZNF705BP0CI00 300 aaPredicted RBP12.16□□□□□ -0.46
CBWD3-211ENST00000615061 H3BQ15 152 aa12.15□□□□□ -0.46
CBWD3-211ENST00000615061 SLC17A3O00476 420 aa12.15□□□□□ -0.46
CBWD3-211ENST00000615061 EBLN2Q6P2I7 272 aa12.15□□□□□ -0.46
CBWD3-211ENST00000615061 ZNF709Q8N972 641 aa12.15□□□□□ -0.46
CBWD3-211ENST00000615061 SLC35B3Q9H1N7 401 aa12.15□□□□□ -0.46
CBWD3-211ENST00000615061 WFDC1Q9HC57 220 aa12.15□□□□□ -0.46
CBWD3-211ENST00000615061 IGLC2P0DOY2 106 aa12.15□□□□□ -0.46
CBWD3-211ENST00000615061 SPATA31B1PQ5VZV4 182 aa12.15□□□□□ -0.46
CBWD3-211ENST00000615061 IL17DQ8TAD2 202 aa12.15□□□□□ -0.46
CBWD3-211ENST00000615061 LRRC20Q8TCA0 184 aa12.15□□□□□ -0.46
CBWD3-211ENST00000615061 RNF24Q9Y225 148 aa12.15□□□□□ -0.46
CBWD3-211ENST00000615061 RFNGQ9Y644 331 aa12.15□□□□□ -0.46
CBWD3-211ENST00000615061 NUTF2P61970 127 aaKnown RBP12.14□□□□□ -0.47
CBWD3-211ENST00000615061 TMEM41BQ5BJD5 291 aa12.14□□□□□ -0.47
CBWD3-211ENST00000615061 ZNF738Q8NE65 137 aa12.14□□□□□ -0.47
CBWD3-211ENST00000615061 X6R8D5 127 aa12.14□□□□□ -0.47
CBWD3-211ENST00000615061 RYR2Q92736 4967 aa12.14□□□□□ -0.47
CBWD3-211ENST00000615061 GIPP09681 153 aaPredicted RBP12.13□□□□□ -0.47
CBWD3-211ENST00000615061 LCN15Q6UWW0 184 aa12.13□□□□□ -0.47
CBWD3-211ENST00000615061 ZNF331Q9NQX6 463 aaPredicted RBP12.13□□□□□ -0.47
CBWD3-211ENST00000615061 ZNF705EA8MWA4 302 aaPredicted RBP12.13□□□□□ -0.47
CBWD3-211ENST00000615061 CNN1P51911 297 aaKnown RBP12.13□□□□□ -0.47
CBWD3-211ENST00000615061 PMS2P11Q13670 270 aa12.13□□□□□ -0.47
CBWD3-211ENST00000615061 PSG3Q16557 428 aa12.13□□□□□ -0.47
CBWD3-211ENST00000615061 Q8NAQ8 132 aa12.13□□□□□ -0.47
CBWD3-211ENST00000615061 HRH4Q9H3N8 390 aa12.13□□□□□ -0.47
CBWD3-211ENST00000615061 ZNF705FA8MVS1 300 aaPredicted RBP12.12□□□□□ -0.47
CBWD3-211ENST00000615061 PYYP10082 97 aa12.12□□□□□ -0.47
CBWD3-211ENST00000615061 PSG9Q00887 426 aa12.12□□□□□ -0.47
CBWD3-211ENST00000615061 AMTNQ6UX39 209 aa12.12□□□□□ -0.47
CBWD3-211ENST00000615061 MIR17HGQ75NE6 70 aa12.12□□□□□ -0.47
CBWD3-211ENST00000615061 SAT2Q96F10 170 aaPredicted RBP12.12□□□□□ -0.47
CBWD3-211ENST00000615061 C1QTNF4Q9BXJ3 329 aa12.12□□□□□ -0.47
CBWD3-211ENST00000615061 MFFQ9GZY8 342 aa12.12□□□□□ -0.47
CBWD3-211ENST00000615061 ZNF586Q9NXT0 402 aa12.12□□□□□ -0.47
CBWD3-211ENST00000615061 IGHV4-28A0A0C4DH34 117 aa12.11□□□□□ -0.47
CBWD3-211ENST00000615061 CXCL2P19875 107 aa12.11□□□□□ -0.47
CBWD3-211ENST00000615061 CLUHP3Q96NS8 147 aa12.11□□□□□ -0.47
CBWD3-211ENST00000615061 SLC25A2Q9BXI2 301 aa12.11□□□□□ -0.47
CBWD3-211ENST00000615061 A8MTW9 85 aa12.1□□□□□ -0.47
CBWD3-211ENST00000615061 C17orf112F2Z3M2 114 aa12.1□□□□□ -0.47
CBWD3-211ENST00000615061 IFNA5P01569 189 aa12.1□□□□□ -0.47
CBWD3-211ENST00000615061 RBMY1A1P0DJD3 496 aaKnown RBP12.1□□□□□ -0.47
CBWD3-211ENST00000615061 RBMY1CP0DJD4 496 aa12.1□□□□□ -0.47
CBWD3-211ENST00000615061 HIST1H1AQ02539 215 aaPredicted RBP12.1□□□□□ -0.47
CBWD3-211ENST00000615061 RBMY1FQ15415 496 aaKnown RBP12.1□□□□□ -0.47
CBWD3-211ENST00000615061 SCGB1C1Q8TD33 95 aa12.1□□□□□ -0.47
CBWD3-211ENST00000615061 RPUSD4Q96CM3 377 aaKnown RBP12.1□□□□□ -0.47
CBWD3-211ENST00000615061 FAM167A-AS1Q96KT0 104 aa12.1□□□□□ -0.47
CBWD3-211ENST00000615061 SLC50A1Q9BRV3 221 aa12.1□□□□□ -0.47
CBWD3-211ENST00000615061 C11orf68Q9H3H3 251 aaKnown RBP12.1□□□□□ -0.47
CBWD3-211ENST00000615061 DNAH1Q9P2D7 4330 aa12.1□□□□□ -0.47
CBWD3-211ENST00000615061 HYDINQ4G0P3 5121 aa12.1□□□□□ -0.47
CBWD3-211ENST00000615061 OR8A1Q8NGG7 326 aa12.1□□□□□ -0.47
CBWD3-211ENST00000615061 KCNIP2Q9NS61 270 aa12.1□□□□□ -0.47
CBWD3-211ENST00000615061 IGHV3OR16-12A0A075B7B8 117 aa12.09□□□□□ -0.47
CBWD3-211ENST00000615061 PRAC2D3DTV9 90 aa12.09□□□□□ -0.47
CBWD3-211ENST00000615061 M0R2Z0 102 aa12.09□□□□□ -0.47
CBWD3-211ENST00000615061 EIF3GO75821 320 aaKnown RBP eCLIP12.09□□□□□ -0.47
CBWD3-211ENST00000615061 SPINK13Q1W4C9 94 aa12.09□□□□□ -0.47
CBWD3-211ENST00000615061 FFAR4Q5NUL3 377 aa12.09□□□□□ -0.47
CBWD3-211ENST00000615061 OR2T35Q8NGX2 323 aa12.09□□□□□ -0.47
CBWD3-211ENST00000615061 AQP10Q96PS8 301 aa12.09□□□□□ -0.47
CBWD3-211ENST00000615061 TMEM14CQ9P0S9 112 aa12.09□□□□□ -0.47
CBWD3-211ENST00000615061 TRBV19A0A075B6N1 114 aa12.08□□□□□ -0.48
CBWD3-211ENST00000615061 CXorf65A6NEN9 183 aa12.08□□□□□ -0.48
CBWD3-211ENST00000615061 G3V3Q6 166 aa12.08□□□□□ -0.48
CBWD3-211ENST00000615061 DUSP14O95147 198 aaKnown RBP12.08□□□□□ -0.48
CBWD3-211ENST00000615061 MIFP14174 115 aa12.08□□□□□ -0.48
CBWD3-211ENST00000615061 NANOS2P60321 138 aaKnown RBP12.08□□□□□ -0.48
CBWD3-211ENST00000615061 ZNF705AQ6ZN79 300 aaPredicted RBP12.08□□□□□ -0.48
CBWD3-211ENST00000615061 FXYD6-FXYD2A0A087WZ82 144 aa12.07□□□□□ -0.48
CBWD3-211ENST00000615061 NDUFB4O95168 129 aa12.07□□□□□ -0.48
CBWD3-211ENST00000615061 C1orf158Q8N1D5 194 aa12.07□□□□□ -0.48
CBWD3-211ENST00000615061 BLNKQ8WV28 456 aa12.07□□□□□ -0.48
CBWD3-211ENST00000615061 ASB13Q8WXK3 278 aa12.07□□□□□ -0.48
CBWD3-211ENST00000615061 PARD6GQ9BYG4 376 aaPredicted RBP12.07□□□□□ -0.48
CBWD3-211ENST00000615061 FUT9Q9Y231 359 aa12.07□□□□□ -0.48
CBWD3-211ENST00000615061 ALMS1Q8TCU4 4167 aa12.07□□□□□ -0.48
CBWD3-211ENST00000615061 RNF222A6NCQ9 220 aa12.07□□□□□ -0.48
CBWD3-211ENST00000615061 CRXO43186 299 aaPredicted RBP12.07□□□□□ -0.48
CBWD3-211ENST00000615061 OR10J4P0C629 311 aa12.07□□□□□ -0.48
CBWD3-211ENST00000615061 HIST1H1EP10412 219 aaKnown RBP12.07□□□□□ -0.48
CBWD3-211ENST00000615061 GUK1Q16774 197 aa12.07□□□□□ -0.48
CBWD3-211ENST00000615061 TRAV12-2A0A075B6T6 113 aa12.06□□□□□ -0.48
CBWD3-211ENST00000615061 M0R3E3 92 aa12.06□□□□□ -0.48
CBWD3-211ENST00000615061 RHOBP62745 196 aa12.06□□□□□ -0.48
CBWD3-211ENST00000615061 BAP18Q8IXM2 172 aa12.06□□□□□ -0.48
CBWD3-211ENST00000615061 HSD17B11Q8NBQ5 300 aa12.06□□□□□ -0.48
CBWD3-211ENST00000615061 C11orf45Q8TAV5 145 aa12.06□□□□□ -0.48
CBWD3-211ENST00000615061 ZNF503Q96F45 646 aa12.06□□□□□ -0.48
CBWD3-211ENST00000615061 MRPL32Q9BYC8 188 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms