RNA–Protein interactions for RNA: ENST00000613424.4

IRF1-211, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best) BASIC

Gene IRF1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-211ENST00000613424 TMEM14CQ9P0S9 112 aa12.21□□□□□ -0.45
IRF1-211ENST00000613424 FUT9Q9Y231 359 aa12.21□□□□□ -0.45
IRF1-211ENST00000613424 H3BMM0 161 aa12.2□□□□□ -0.46
IRF1-211ENST00000613424 HLA-DRB4P13762 266 aa12.2□□□□□ -0.46
IRF1-211ENST00000613424 CXCL2P19875 107 aa12.2□□□□□ -0.46
IRF1-211ENST00000613424 HLA-DMBP28068 263 aa12.2□□□□□ -0.46
IRF1-211ENST00000613424 ACOT6Q3I5F7 207 aaPredicted RBP12.2□□□□□ -0.46
IRF1-211ENST00000613424 LCN15Q6UWW0 184 aa12.2□□□□□ -0.46
IRF1-211ENST00000613424 FOXI2Q6ZQN5 318 aa12.2□□□□□ -0.46
IRF1-211ENST00000613424 KCNRGQ8N5I3 272 aa12.2□□□□□ -0.46
IRF1-211ENST00000613424 SAT2Q96F10 170 aaPredicted RBP12.2□□□□□ -0.46
IRF1-211ENST00000613424 PSMG3Q9BT73 122 aaPredicted RBP12.2□□□□□ -0.46
IRF1-211ENST00000613424 SAV1Q9H4B6 383 aaPredicted RBP12.2□□□□□ -0.46
IRF1-211ENST00000613424 ZNF331Q9NQX6 463 aaPredicted RBP12.2□□□□□ -0.46
IRF1-211ENST00000613424 CYTL1Q9NRR1 136 aa12.2□□□□□ -0.46
IRF1-211ENST00000613424 ZNF586Q9NXT0 402 aa12.2□□□□□ -0.46
IRF1-211ENST00000613424 HLA-DRB4X5D2U9 266 aa12.2□□□□□ -0.46
IRF1-211ENST00000613424 F6UB75 175 aa12.19□□□□□ -0.46
IRF1-211ENST00000613424 SLC17A3O00476 420 aa12.19□□□□□ -0.46
IRF1-211ENST00000613424 JTBO76095 146 aa12.19□□□□□ -0.46
IRF1-211ENST00000613424 PYYP10082 97 aa12.19□□□□□ -0.46
IRF1-211ENST00000613424 HIST1H1EP10412 219 aaKnown RBP12.19□□□□□ -0.46
IRF1-211ENST00000613424 M6PRP20645 277 aa12.19□□□□□ -0.46
IRF1-211ENST00000613424 RHOBP62745 196 aa12.19□□□□□ -0.46
IRF1-211ENST00000613424 ZNF345Q14585 488 aa12.19□□□□□ -0.46
IRF1-211ENST00000613424 GUK1Q16774 197 aa12.19□□□□□ -0.46
IRF1-211ENST00000613424 Q6ZWC4 215 aa12.19□□□□□ -0.46
IRF1-211ENST00000613424 TCTE3Q8IZS6 198 aa12.19□□□□□ -0.46
IRF1-211ENST00000613424 OR2G3Q8NGZ4 309 aa12.19□□□□□ -0.46
IRF1-211ENST00000613424 SH3BGRL3Q9H299 93 aa12.19□□□□□ -0.46
IRF1-211ENST00000613424 OR51M1Q9H341 326 aa12.19□□□□□ -0.46
IRF1-211ENST00000613424 A0A1B0GVG6 124 aa12.18□□□□□ -0.46
IRF1-211ENST00000613424 RAB2AP61019 212 aa12.18□□□□□ -0.46
IRF1-211ENST00000613424 SERF2P84101 59 aa12.18□□□□□ -0.46
IRF1-211ENST00000613424 PSG3Q16557 428 aa12.18□□□□□ -0.46
IRF1-211ENST00000613424 EBLN2Q6P2I7 272 aa12.18□□□□□ -0.46
IRF1-211ENST00000613424 OR10G4Q8NGN3 311 aa12.18□□□□□ -0.46
IRF1-211ENST00000613424 OR10G9Q8NGN4 311 aa12.18□□□□□ -0.46
IRF1-211ENST00000613424 OR10G7Q8NGN6 311 aa12.18□□□□□ -0.46
IRF1-211ENST00000613424 GNPNAT1Q96EK6 184 aaPredicted RBP12.18□□□□□ -0.46
IRF1-211ENST00000613424 OVOL2Q9BRP0 275 aa12.18□□□□□ -0.46
IRF1-211ENST00000613424 SLC50A1Q9BRV3 221 aa12.18□□□□□ -0.46
IRF1-211ENST00000613424 TRBV19A0A075B6N1 114 aa12.17□□□□□ -0.46
IRF1-211ENST00000613424 A0A0D9SG52 128 aa12.17□□□□□ -0.46
IRF1-211ENST00000613424 A0A0J9YX75 114 aa12.17□□□□□ -0.46
IRF1-211ENST00000613424 EIF3GO75821 320 aaKnown RBP eCLIP12.17□□□□□ -0.46
IRF1-211ENST00000613424 CA1P00915 261 aaPredicted RBP12.17□□□□□ -0.46
IRF1-211ENST00000613424 IGKV3-20P01619 116 aa12.17□□□□□ -0.46
IRF1-211ENST00000613424 GIG44P09565 113 aaPredicted RBP12.17□□□□□ -0.46
IRF1-211ENST00000613424 SPP1P10451 314 aa12.17□□□□□ -0.46
IRF1-211ENST00000613424 DEFB135Q30KP9 77 aa12.17□□□□□ -0.46
IRF1-211ENST00000613424 MORN3Q6PF18 240 aaPredicted RBP12.17□□□□□ -0.46
IRF1-211ENST00000613424 ZNF738Q8NE65 137 aa12.17□□□□□ -0.46
IRF1-211ENST00000613424 ARPC5LQ9BPX5 153 aa12.17□□□□□ -0.46
IRF1-211ENST00000613424 PAXXQ9BUH6 204 aa12.17□□□□□ -0.46
IRF1-211ENST00000613424 TENM3Q9P273 2699 aa12.17□□□□□ -0.46
IRF1-211ENST00000613424 A0A1W2PPV4 95 aa12.16□□□□□ -0.46
IRF1-211ENST00000613424 SPRY2O43597 315 aa12.16□□□□□ -0.46
IRF1-211ENST00000613424 NBEAP1P0C6P0 100 aa12.16□□□□□ -0.46
IRF1-211ENST00000613424 FAM122CQ6P4D5 195 aa12.16□□□□□ -0.46
IRF1-211ENST00000613424 AKAP14Q86UN6 197 aa12.16□□□□□ -0.46
IRF1-211ENST00000613424 OR4B1Q8NGF8 309 aa12.16□□□□□ -0.46
IRF1-211ENST00000613424 BLNKQ8WV28 456 aa12.16□□□□□ -0.46
IRF1-211ENST00000613424 RNF141Q8WVD5 230 aa12.16□□□□□ -0.46
IRF1-211ENST00000613424 RNF183Q96D59 192 aa12.16□□□□□ -0.46
IRF1-211ENST00000613424 ZNF503Q96F45 646 aa12.16□□□□□ -0.46
IRF1-211ENST00000613424 TP53TG1Q9Y2A0 90 aa12.16□□□□□ -0.46
IRF1-211ENST00000613424 ZNF705FA8MVS1 300 aaPredicted RBP12.15□□□□□ -0.46
IRF1-211ENST00000613424 OR7C2O60412 319 aa12.15□□□□□ -0.46
IRF1-211ENST00000613424 ZNF253O75346 499 aa12.15□□□□□ -0.46
IRF1-211ENST00000613424 NDUFB4O95168 129 aa12.15□□□□□ -0.46
IRF1-211ENST00000613424 MBP02144 154 aa12.15□□□□□ -0.46
IRF1-211ENST00000613424 OR10J4P0C629 311 aa12.15□□□□□ -0.46
IRF1-211ENST00000613424 ZNF705DP0CH99 300 aaPredicted RBP12.15□□□□□ -0.46
IRF1-211ENST00000613424 ZNF705BP0CI00 300 aaPredicted RBP12.15□□□□□ -0.46
IRF1-211ENST00000613424 PRB4P10163 310 aaPredicted RBP12.15□□□□□ -0.46
IRF1-211ENST00000613424 TAS2R45P59539 299 aa12.15□□□□□ -0.46
IRF1-211ENST00000613424 RPP25LQ8N5L8 163 aaKnown RBP12.15□□□□□ -0.46
IRF1-211ENST00000613424 RPUSD4Q96CM3 377 aaKnown RBP12.15□□□□□ -0.46
IRF1-211ENST00000613424 FXYD5Q96DB9 178 aa12.15□□□□□ -0.46
IRF1-211ENST00000613424 CLUHP3Q96NS8 147 aa12.15□□□□□ -0.46
IRF1-211ENST00000613424 CLEC5AQ9NY25 188 aa12.15□□□□□ -0.46
IRF1-211ENST00000613424 C1QBP02746 253 aa12.14□□□□□ -0.47
IRF1-211ENST00000613424 C4BPBP20851 252 aa12.14□□□□□ -0.47
IRF1-211ENST00000613424 NUTF2P61970 127 aaKnown RBP12.14□□□□□ -0.47
IRF1-211ENST00000613424 PSG9Q00887 426 aa12.14□□□□□ -0.47
IRF1-211ENST00000613424 PDE6HQ13956 83 aa12.14□□□□□ -0.47
IRF1-211ENST00000613424 KHDC3LQ587J8 217 aa12.14□□□□□ -0.47
IRF1-211ENST00000613424 TMUB2Q71RG4 321 aa12.14□□□□□ -0.47
IRF1-211ENST00000613424 KANTRA0A1W2PQU2 76 aa12.13□□□□□ -0.47
IRF1-211ENST00000613424 BCL2L11O43521 198 aa12.13□□□□□ -0.47
IRF1-211ENST00000613424 DUSP14O95147 198 aaKnown RBP12.13□□□□□ -0.47
IRF1-211ENST00000613424 CDC34P49427 236 aaPredicted RBP12.13□□□□□ -0.47
IRF1-211ENST00000613424 CNN1P51911 297 aaKnown RBP12.13□□□□□ -0.47
IRF1-211ENST00000613424 FXYD7P58549 80 aa12.13□□□□□ -0.47
IRF1-211ENST00000613424 CD300CQ08708 224 aa12.13□□□□□ -0.47
IRF1-211ENST00000613424 TMEM41BQ5BJD5 291 aa12.13□□□□□ -0.47
IRF1-211ENST00000613424 OR8A1Q8NGG7 326 aa12.13□□□□□ -0.47
IRF1-211ENST00000613424 A8MTW9 85 aa12.12□□□□□ -0.47
IRF1-211ENST00000613424 PRAC2D3DTV9 90 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms