RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 SRSF1Q07955 248 aaKnown RBP eCLIP10.01□□□□□ -0.81
CDH1-212ENST00000611625 LINC00311Q8N616 119 aa10.01□□□□□ -0.81
CDH1-212ENST00000611625 FAM215AQ9Y5M1 114 aa10.01□□□□□ -0.81
CDH1-212ENST00000611625 IGKCP01834 107 aa10□□□□□ -0.81
CDH1-212ENST00000611625 FXYD7P58549 80 aa10□□□□□ -0.81
CDH1-212ENST00000611625 GUSBP1Q15486 140 aa10□□□□□ -0.81
CDH1-212ENST00000611625 MINOS1Q5TGZ0 78 aa10□□□□□ -0.81
CDH1-212ENST00000611625 AMN1Q8IY45 258 aa10□□□□□ -0.81
CDH1-212ENST00000611625 MINOS1-NBL1R4GNA1 71 aa10□□□□□ -0.81
CDH1-212ENST00000611625 LY6HO94772 140 aa10□□□□□ -0.81
CDH1-212ENST00000611625 PAX1P15863 534 aa10□□□□□ -0.81
CDH1-212ENST00000611625 GLMPQ8WWB7 406 aa10□□□□□ -0.81
CDH1-212ENST00000611625 FAM168AQ92567 244 aa10□□□□□ -0.81
CDH1-212ENST00000611625 TPSG1Q9NRR2 321 aa10□□□□□ -0.81
CDH1-212ENST00000611625 M0R1W7 72 aa10□□□□□ -0.81
CDH1-212ENST00000611625 Q6ZPA2 131 aa10□□□□□ -0.81
CDH1-212ENST00000611625 IGFL3Q6UXB1 125 aa10□□□□□ -0.81
CDH1-212ENST00000611625 C7orf69Q9H7B7 122 aa10□□□□□ -0.81
CDH1-212ENST00000611625 PAX8Q06710 450 aa9.99□□□□□ -0.81
CDH1-212ENST00000611625 LINC00527Q9UJ94 153 aa9.99□□□□□ -0.81
CDH1-212ENST00000611625 IGLV2-14P01704 120 aa9.99□□□□□ -0.81
CDH1-212ENST00000611625 UBE2V1Q13404 147 aa9.99□□□□□ -0.81
CDH1-212ENST00000611625 PDE6HQ13956 83 aa9.99□□□□□ -0.81
CDH1-212ENST00000611625 IGFL4Q6B9Z1 124 aa9.99□□□□□ -0.81
CDH1-212ENST00000611625 TEX43Q6ZNM6 134 aa9.99□□□□□ -0.81
CDH1-212ENST00000611625 DOPEY2Q9Y3R5 2298 aa9.99□□□□□ -0.81
CDH1-212ENST00000611625 A0A1B0GWB2 263 aa9.99□□□□□ -0.81
CDH1-212ENST00000611625 ORMDL2Q53FV1 153 aa9.99□□□□□ -0.81
CDH1-212ENST00000611625 DIAPH2-AS1Q14236 149 aa9.98□□□□□ -0.81
CDH1-212ENST00000611625 FXYD5Q96DB9 178 aa9.98□□□□□ -0.81
CDH1-212ENST00000611625 RAX2Q96IS3 184 aa9.98□□□□□ -0.81
CDH1-212ENST00000611625 LINC01559Q495D7 138 aa9.98□□□□□ -0.81
CDH1-212ENST00000611625 SIGLEC15Q6ZMC9 328 aa9.98□□□□□ -0.81
CDH1-212ENST00000611625 RCHY1Q96PM5 261 aa9.98□□□□□ -0.81
CDH1-212ENST00000611625 DUX5Q96PT3 197 aa9.98□□□□□ -0.81
CDH1-212ENST00000611625 APOMO95445 188 aa9.98□□□□□ -0.81
CDH1-212ENST00000611625 IFI27P40305 119 aaPredicted RBP9.98□□□□□ -0.81
CDH1-212ENST00000611625 SMPXQ9UHP9 88 aa9.98□□□□□ -0.81
CDH1-212ENST00000611625 ARHGAP21Q5T5U3 1957 aa9.98□□□□□ -0.81
CDH1-212ENST00000611625 TRBV19A0A075B6N1 114 aa9.98□□□□□ -0.81
CDH1-212ENST00000611625 PRTN3P24158 256 aa9.98□□□□□ -0.81
CDH1-212ENST00000611625 SMAGPQ0VAQ4 97 aa9.98□□□□□ -0.81
CDH1-212ENST00000611625 ASPHD1Q5U4P2 390 aa9.98□□□□□ -0.81
CDH1-212ENST00000611625 THAP8Q8NA92 274 aa9.98□□□□□ -0.81
CDH1-212ENST00000611625 NAA38Q9BRA0 125 aaKnown RBP9.98□□□□□ -0.81
CDH1-212ENST00000611625 PRR14LQ5THK1 2151 aa9.97□□□□□ -0.81
CDH1-212ENST00000611625 IGHV3OR16-12A0A075B7B8 117 aa9.97□□□□□ -0.81
CDH1-212ENST00000611625 SMKR1H3BMG3 65 aa9.97□□□□□ -0.81
CDH1-212ENST00000611625 OR5A1Q8NGJ0 315 aa9.97□□□□□ -0.81
CDH1-212ENST00000611625 TRAV41A0A0B4J266 112 aa9.97□□□□□ -0.81
CDH1-212ENST00000611625 H7C1H1 209 aa9.97□□□□□ -0.81
CDH1-212ENST00000611625 TMEM75Q8N9X5 138 aa9.97□□□□□ -0.81
CDH1-212ENST00000611625 ZNF256Q9Y2P7 627 aaPredicted RBP9.97□□□□□ -0.81
CDH1-212ENST00000611625 COX11Q9Y6N1 276 aa9.97□□□□□ -0.81
CDH1-212ENST00000611625 SPOCK3Q9BQ16 436 aa9.96□□□□□ -0.81
CDH1-212ENST00000611625 GEMIN7Q9H840 131 aaKnown RBP9.96□□□□□ -0.81
CDH1-212ENST00000611625 ZFHX2Q9C0A1 2572 aaPredicted RBP9.96□□□□□ -0.81
CDH1-212ENST00000611625 OVOL1O14753 267 aa9.96□□□□□ -0.81
CDH1-212ENST00000611625 CD7P09564 240 aa9.96□□□□□ -0.81
CDH1-212ENST00000611625 LAGE3Q14657 143 aa9.96□□□□□ -0.81
CDH1-212ENST00000611625 SAMD13Q5VXD3 122 aa9.96□□□□□ -0.81
CDH1-212ENST00000611625 GTSCR1Q86UQ5 136 aa9.96□□□□□ -0.81
CDH1-212ENST00000611625 CYSLTR1Q9Y271 337 aa9.96□□□□□ -0.81
CDH1-212ENST00000611625 COX6B1P14854 86 aa9.96□□□□□ -0.82
CDH1-212ENST00000611625 ZNF562Q6V9R5 426 aa9.96□□□□□ -0.82
CDH1-212ENST00000611625 MEGF9Q9H1U4 602 aa9.96□□□□□ -0.82
CDH1-212ENST00000611625 SSBP2P81877 361 aaPredicted RBP9.96□□□□□ -0.82
CDH1-212ENST00000611625 SPRNQ5BIV9 151 aa9.96□□□□□ -0.82
CDH1-212ENST00000611625 TMEM219Q86XT9 240 aa9.96□□□□□ -0.82
CDH1-212ENST00000611625 MOB4Q9Y3A3 225 aa9.96□□□□□ -0.82
CDH1-212ENST00000611625 TRAV40A0A0B4J280 105 aa9.95□□□□□ -0.82
CDH1-212ENST00000611625 KIR2DL5BA0A0G2JN68 375 aa9.95□□□□□ -0.82
CDH1-212ENST00000611625 KIR2DL5BA0A0G2JPC4 375 aa9.95□□□□□ -0.82
CDH1-212ENST00000611625 TMEM213A2RRL7 107 aa9.95□□□□□ -0.82
CDH1-212ENST00000611625 ODF3L1Q8IXM7 274 aa9.95□□□□□ -0.82
CDH1-212ENST00000611625 KIR2DL5AQ8N109 375 aa9.95□□□□□ -0.82
CDH1-212ENST00000611625 NPFFR1Q9GZQ6 430 aa9.95□□□□□ -0.82
CDH1-212ENST00000611625 MED12LQ86YW9 2145 aa9.95□□□□□ -0.82
CDH1-212ENST00000611625 ADAMTS9Q9P2N4 1935 aa9.95□□□□□ -0.82
CDH1-212ENST00000611625 IGLL1P15814 213 aa9.95□□□□□ -0.82
CDH1-212ENST00000611625 ZNF418Q8TF45 676 aaPredicted RBP9.95□□□□□ -0.82
CDH1-212ENST00000611625 BEX4Q9NWD9 120 aaPredicted RBP9.95□□□□□ -0.82
CDH1-212ENST00000611625 CHTOPQ9Y3Y2 248 aaKnown RBP9.95□□□□□ -0.82
CDH1-212ENST00000611625 EFNA4P52798 201 aa9.95□□□□□ -0.82
CDH1-212ENST00000611625 PRR30Q53SZ7 412 aaPredicted RBP9.95□□□□□ -0.82
CDH1-212ENST00000611625 C19orf54Q5BKX5 351 aa9.95□□□□□ -0.82
CDH1-212ENST00000611625 NUPR1O60356 82 aa9.95□□□□□ -0.82
CDH1-212ENST00000611625 C9orf139Q6ZV77 190 aa9.95□□□□□ -0.82
CDH1-212ENST00000611625 BCL6BQ8N143 479 aaPredicted RBP9.95□□□□□ -0.82
CDH1-212ENST00000611625 JMJD8Q96S16 334 aa9.95□□□□□ -0.82
CDH1-212ENST00000611625 CD5LO43866 347 aa9.94□□□□□ -0.82
CDH1-212ENST00000611625 LHBP01229 141 aa9.94□□□□□ -0.82
CDH1-212ENST00000611625 IGLC1P0CG04 106 aa9.94□□□□□ -0.82
CDH1-212ENST00000611625 SAMD5Q5TGI4 173 aa9.94□□□□□ -0.82
CDH1-212ENST00000611625 TMEM14CQ9P0S9 112 aa9.94□□□□□ -0.82
CDH1-212ENST00000611625 TNFRSF18Q9Y5U5 241 aa9.94□□□□□ -0.82
CDH1-212ENST00000611625 BDP1A6H8Y1 2624 aa9.94□□□□□ -0.82
CDH1-212ENST00000611625 NPSP0C0P6 89 aa9.94□□□□□ -0.82
CDH1-212ENST00000611625 SPRY4Q9C004 299 aa9.94□□□□□ -0.82
CDH1-212ENST00000611625 SELENOKQ9Y6D0 94 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms