RNA–Protein interactions for RNA: ENST00000610976.1

U1.40-201, humanhuman

BASIC

Gene U1, Length 164 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.40-201ENST00000610976 PAFAH1B2P68402 229 aa6.74□□□□□ -1.33
U1.40-201ENST00000610976 DEFB136Q30KP8 78 aa6.74□□□□□ -1.33
U1.40-201ENST00000610976 AWAT1Q58HT5 328 aa6.74□□□□□ -1.33
U1.40-201ENST00000610976 C10orf91Q5T1B1 145 aa6.74□□□□□ -1.33
U1.40-201ENST00000610976 C18orf65Q6ZTR6 163 aa6.74□□□□□ -1.33
U1.40-201ENST00000610976 MRPL53Q96EL3 112 aaKnown RBP6.74□□□□□ -1.33
U1.40-201ENST00000610976 SIGLEC8Q9NYZ4 499 aa6.74□□□□□ -1.33
U1.40-201ENST00000610976 EPDR1Q9UM22 224 aa6.74□□□□□ -1.33
U1.40-201ENST00000610976 CARHSP1Q9Y2V2 147 aaKnown RBP6.74□□□□□ -1.33
U1.40-201ENST00000610976 SMAD5-AS1Q9Y6J3 95 aa6.74□□□□□ -1.33
U1.40-201ENST00000610976 ZNF469Q96JG9 3925 aaPredicted RBP6.73□□□□□ -1.33
U1.40-201ENST00000610976 IGHV3-49A0A0A0MS15 119 aa6.73□□□□□ -1.33
U1.40-201ENST00000610976 IGHV3-66A0A0C4DH42 116 aa6.73□□□□□ -1.33
U1.40-201ENST00000610976 FBLL1A6NHQ2 334 aaKnown RBP6.73□□□□□ -1.33
U1.40-201ENST00000610976 ZNF727A8MUV8 499 aa6.73□□□□□ -1.33
U1.40-201ENST00000610976 GGTLC3B5MD39 225 aa6.73□□□□□ -1.33
U1.40-201ENST00000610976 C9JQL5 133 aa6.73□□□□□ -1.33
U1.40-201ENST00000610976 OVOL1O14753 267 aa6.73□□□□□ -1.33
U1.40-201ENST00000610976 NDUFB4O95168 129 aa6.73□□□□□ -1.33
U1.40-201ENST00000610976 FOLR2P14207 255 aa6.73□□□□□ -1.33
U1.40-201ENST00000610976 ID1P41134 155 aa6.73□□□□□ -1.33
U1.40-201ENST00000610976 CNN1P51911 297 aaKnown RBP6.73□□□□□ -1.33
U1.40-201ENST00000610976 CEBPGP53567 150 aa6.73□□□□□ -1.33
U1.40-201ENST00000610976 RPL11P62913 178 aaKnown RBP6.73□□□□□ -1.33
U1.40-201ENST00000610976 SRSF2Q01130 221 aaKnown RBP6.73□□□□□ -1.33
U1.40-201ENST00000610976 NSUN5P1Q3KNT7 163 aa6.73□□□□□ -1.33
U1.40-201ENST00000610976 TCF24Q7RTU0 167 aa6.73□□□□□ -1.33
U1.40-201ENST00000610976 SVBPQ8N300 66 aa6.73□□□□□ -1.33
U1.40-201ENST00000610976 CYB561D1Q8N8Q1 229 aa6.73□□□□□ -1.33
U1.40-201ENST00000610976 TMEM158Q8WZ71 300 aa6.73□□□□□ -1.33
U1.40-201ENST00000610976 DLX4Q92988 240 aaPredicted RBP6.73□□□□□ -1.33
U1.40-201ENST00000610976 NIPSNAP3BQ9BS92 247 aa6.73□□□□□ -1.33
U1.40-201ENST00000610976 ATG101Q9BSB4 218 aa6.73□□□□□ -1.33
U1.40-201ENST00000610976 NRN1Q9NPD7 142 aa6.73□□□□□ -1.33
U1.40-201ENST00000610976 ZNF331Q9NQX6 463 aaPredicted RBP6.73□□□□□ -1.33
U1.40-201ENST00000610976 SONP18583 2426 aaKnown RBP6.72□□□□□ -1.33
U1.40-201ENST00000610976 IGHV3OR16-13A0A075B7E8 117 aa6.72□□□□□ -1.33
U1.40-201ENST00000610976 IGHV3-74A0A0B4J1X5 117 aa6.72□□□□□ -1.33
U1.40-201ENST00000610976 SCO2A0A1W2PP80 73 aa6.72□□□□□ -1.33
U1.40-201ENST00000610976 ADARB2-AS1A8MUL3 147 aa6.72□□□□□ -1.33
U1.40-201ENST00000610976 PEX7O00628 323 aa6.72□□□□□ -1.33
U1.40-201ENST00000610976 AKR1C3P42330 323 aa6.72□□□□□ -1.33
U1.40-201ENST00000610976 TAS2R60P59551 318 aa6.72□□□□□ -1.33
U1.40-201ENST00000610976 PNRC1Q12796 327 aaPredicted RBP6.72□□□□□ -1.33
U1.40-201ENST00000610976 TMEM241Q24JQ0 296 aa6.72□□□□□ -1.33
U1.40-201ENST00000610976 FAM90A2PQ658T7 463 aa6.72□□□□□ -1.33
U1.40-201ENST00000610976 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.72□□□□□ -1.33
U1.40-201ENST00000610976 DYNLRB2Q8TF09 96 aa6.72□□□□□ -1.33
U1.40-201ENST00000610976 C16orf92Q96LL3 132 aa6.72□□□□□ -1.33
U1.40-201ENST00000610976 C17orf77Q96MU5 243 aa6.72□□□□□ -1.33
U1.40-201ENST00000610976 LINC00052Q96N35 136 aa6.72□□□□□ -1.33
U1.40-201ENST00000610976 CITED1Q99966 193 aa6.72□□□□□ -1.33
U1.40-201ENST00000610976 SMIM7Q9BQ49 75 aa6.72□□□□□ -1.33
U1.40-201ENST00000610976 PARLQ9H300 379 aa6.72□□□□□ -1.33
U1.40-201ENST00000610976 MLXQ9UH92 298 aa6.72□□□□□ -1.33
U1.40-201ENST00000610976 LY96Q9Y6Y9 160 aa6.72□□□□□ -1.33
U1.40-201ENST00000610976 TLN2Q9Y4G6 2542 aa6.72□□□□□ -1.33
U1.40-201ENST00000610976 CELSR1Q9NYQ6 3014 aa6.71□□□□□ -1.34
U1.40-201ENST00000610976 TRAV2A0A0B4J234 112 aa6.71□□□□□ -1.34
U1.40-201ENST00000610976 TRAV25A0A0B4J276 109 aa6.71□□□□□ -1.34
U1.40-201ENST00000610976 H3BTX0 84 aa6.71□□□□□ -1.34
U1.40-201ENST00000610976 ISLRO14498 428 aa6.71□□□□□ -1.34
U1.40-201ENST00000610976 SNAPINO95295 136 aa6.71□□□□□ -1.34
U1.40-201ENST00000610976 APOC3P02656 99 aa6.71□□□□□ -1.34
U1.40-201ENST00000610976 PF4P02776 101 aa6.71□□□□□ -1.34
U1.40-201ENST00000610976 TCRAP04437 139 aa6.71□□□□□ -1.34
U1.40-201ENST00000610976 CSN3P07498 182 aa6.71□□□□□ -1.34
U1.40-201ENST00000610976 KRTAP10-3P60369 221 aa6.71□□□□□ -1.34
U1.40-201ENST00000610976 EXOC3-AS1Q8N2X6 119 aa6.71□□□□□ -1.34
U1.40-201ENST00000610976 OR2K2Q8NGT1 345 aa6.71□□□□□ -1.34
U1.40-201ENST00000610976 C2CD4CQ8TF44 421 aa6.71□□□□□ -1.34
U1.40-201ENST00000610976 SMIM12Q96EX1 92 aa6.71□□□□□ -1.34
U1.40-201ENST00000610976 FMC1Q96HJ9 113 aa6.71□□□□□ -1.34
U1.40-201ENST00000610976 DUX3Q96PT4 197 aa6.71□□□□□ -1.34
U1.40-201ENST00000610976 NAT8Q9UHE5 227 aa6.71□□□□□ -1.34
U1.40-201ENST00000610976 FLNBO75369 2602 aaKnown RBP6.71□□□□□ -1.34
U1.40-201ENST00000610976 HIVEP1P15822 2718 aa6.7□□□□□ -1.34
U1.40-201ENST00000610976 TRBV6-1A0A0K0K1D8 114 aa6.7□□□□□ -1.34
U1.40-201ENST00000610976 RBAKDNA6NC62 111 aa6.7□□□□□ -1.34
U1.40-201ENST00000610976 B4DEV8 164 aa6.7□□□□□ -1.34
U1.40-201ENST00000610976 C9JCJ5 164 aa6.7□□□□□ -1.34
U1.40-201ENST00000610976 DNASE2O00115 360 aaPredicted RBP6.7□□□□□ -1.34
U1.40-201ENST00000610976 SLC17A3O00476 420 aa6.7□□□□□ -1.34
U1.40-201ENST00000610976 SNRPCP09234 159 aaKnown RBP6.7□□□□□ -1.34
U1.40-201ENST00000610976 RPL35P42766 123 aaKnown RBP6.7□□□□□ -1.34
U1.40-201ENST00000610976 UBE2G1P62253 170 aa6.7□□□□□ -1.34
U1.40-201ENST00000610976 SNRPD3P62318 126 aaKnown RBP6.7□□□□□ -1.34
U1.40-201ENST00000610976 PSG3Q16557 428 aa6.7□□□□□ -1.34
U1.40-201ENST00000610976 TMEM183BQ1AE95 376 aa6.7□□□□□ -1.34
U1.40-201ENST00000610976 ZNF674Q2M3X9 581 aa6.7□□□□□ -1.34
U1.40-201ENST00000610976 KRTAP24-1Q3LI83 254 aa6.7□□□□□ -1.34
U1.40-201ENST00000610976 RBPMS2Q6ZRY4 209 aaKnown RBP6.7□□□□□ -1.34
U1.40-201ENST00000610976 TMEM75Q8N9X5 138 aa6.7□□□□□ -1.34
U1.40-201ENST00000610976 TVP23CQ96ET8 276 aa6.7□□□□□ -1.34
U1.40-201ENST00000610976 ZNF747Q9BV97 191 aa6.7□□□□□ -1.34
U1.40-201ENST00000610976 BIN3Q9NQY0 253 aa6.7□□□□□ -1.34
U1.40-201ENST00000610976 KLF12Q9Y4X4 402 aa6.7□□□□□ -1.34
U1.40-201ENST00000610976 FN1P02751 2386 aaKnown RBP6.7□□□□□ -1.34
U1.40-201ENST00000610976 SVEP1Q4LDE5 3571 aa6.69□□□□□ -1.34
U1.40-201ENST00000610976 DIRC3C9JPN6 131 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms