RNA–Protein interactions for RNA: ENST00000608957.5

LINC00539-204, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 869 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-204ENST00000608957 ZNF506Q5JVG8 444 aa8.66□□□□□ -1.02
LINC00539-204ENST00000608957 LCN12Q6JVE5 192 aa8.66□□□□□ -1.02
LINC00539-204ENST00000608957 STXBP6Q8NFX7 210 aa8.66□□□□□ -1.02
LINC00539-204ENST00000608957 OR2K2Q8NGT1 345 aa8.66□□□□□ -1.02
LINC00539-204ENST00000608957 ZNF503Q96F45 646 aa8.66□□□□□ -1.02
LINC00539-204ENST00000608957 RCHY1Q96PM5 261 aa8.66□□□□□ -1.02
LINC00539-204ENST00000608957 TM2D3Q9BRN9 247 aa8.66□□□□□ -1.02
LINC00539-204ENST00000608957 EIF5A2Q9GZV4 153 aaKnown RBP8.66□□□□□ -1.02
LINC00539-204ENST00000608957 WFDC10AQ9H1F0 79 aa8.66□□□□□ -1.02
LINC00539-204ENST00000608957 TREM1Q9NP99 234 aa8.66□□□□□ -1.02
LINC00539-204ENST00000608957 TMEM167BQ9NRX6 74 aa8.66□□□□□ -1.02
LINC00539-204ENST00000608957 MLXQ9UH92 298 aa8.66□□□□□ -1.02
LINC00539-204ENST00000608957 A8MWP6 167 aa8.65□□□□□ -1.02
LINC00539-204ENST00000608957 NDUFA4O00483 81 aa8.65□□□□□ -1.02
LINC00539-204ENST00000608957 CD5P06127 495 aa8.65□□□□□ -1.02
LINC00539-204ENST00000608957 CD7P09564 240 aa8.65□□□□□ -1.02
LINC00539-204ENST00000608957 CBLN1P23435 193 aa8.65□□□□□ -1.02
LINC00539-204ENST00000608957 UBE2L3P68036 154 aaKnown RBP8.65□□□□□ -1.02
LINC00539-204ENST00000608957 ICAM4Q14773 271 aa8.65□□□□□ -1.02
LINC00539-204ENST00000608957 TM4SF20Q53R12 229 aa8.65□□□□□ -1.02
LINC00539-204ENST00000608957 NARS2Q96I59 477 aaKnown RBP8.65□□□□□ -1.02
LINC00539-204ENST00000608957 RARRES2Q99969 163 aa8.65□□□□□ -1.02
LINC00539-204ENST00000608957 PAXXQ9BUH6 204 aa8.65□□□□□ -1.02
LINC00539-204ENST00000608957 SMDT1Q9H4I9 107 aa8.65□□□□□ -1.02
LINC00539-204ENST00000608957 RNF24Q9Y225 148 aa8.65□□□□□ -1.02
LINC00539-204ENST00000608957 IGHV3OR16-8A0A075B7F1 116 aa8.64□□□□□ -1.03
LINC00539-204ENST00000608957 ZNF98A6NK75 572 aa8.64□□□□□ -1.03
LINC00539-204ENST00000608957 OR10J4P0C629 311 aa8.64□□□□□ -1.03
LINC00539-204ENST00000608957 PYYP10082 97 aa8.64□□□□□ -1.03
LINC00539-204ENST00000608957 LEMD1Q68G75 181 aa8.64□□□□□ -1.03
LINC00539-204ENST00000608957 SUN5Q8TC36 379 aa8.64□□□□□ -1.03
LINC00539-204ENST00000608957 RXFP4Q8TDU9 374 aa8.64□□□□□ -1.03
LINC00539-204ENST00000608957 DYNLRB2Q8TF09 96 aa8.64□□□□□ -1.03
LINC00539-204ENST00000608957 TMEM190Q8WZ59 177 aa8.64□□□□□ -1.03
LINC00539-204ENST00000608957 FXYD5Q96DB9 178 aa8.64□□□□□ -1.03
LINC00539-204ENST00000608957 METTL26Q96S19 204 aa8.64□□□□□ -1.03
LINC00539-204ENST00000608957 OR51M1Q9H341 326 aa8.64□□□□□ -1.03
LINC00539-204ENST00000608957 TMEM14CQ9P0S9 112 aa8.64□□□□□ -1.03
LINC00539-204ENST00000608957 VAX2Q9UIW0 290 aa8.64□□□□□ -1.03
LINC00539-204ENST00000608957 ARL2-SNX15V9GYD0 113 aa8.64□□□□□ -1.03
LINC00539-204ENST00000608957 KMT2CQ8NEZ4 4911 aaKnown RBP8.63□□□□□ -1.03
LINC00539-204ENST00000608957 ZNF320A2RRD8 509 aa8.63□□□□□ -1.03
LINC00539-204ENST00000608957 C9JQL5 133 aa8.63□□□□□ -1.03
LINC00539-204ENST00000608957 PAGE4O60829 102 aa8.63□□□□□ -1.03
LINC00539-204ENST00000608957 S100A1P23297 94 aa8.63□□□□□ -1.03
LINC00539-204ENST00000608957 CD81P60033 236 aa8.63□□□□□ -1.03
LINC00539-204ENST00000608957 UBE2G2P60604 165 aa8.63□□□□□ -1.03
LINC00539-204ENST00000608957 FAM106AQ4KMX7 169 aa8.63□□□□□ -1.03
LINC00539-204ENST00000608957 LINC00322Q6ZN03 302 aaPredicted RBP8.63□□□□□ -1.03
LINC00539-204ENST00000608957 BPIFA4PQ86YQ2 179 aa8.63□□□□□ -1.03
LINC00539-204ENST00000608957 TMEM61Q8N0U2 210 aa8.63□□□□□ -1.03
LINC00539-204ENST00000608957 C20orf24Q9BUV8 137 aa8.63□□□□□ -1.03
LINC00539-204ENST00000608957 TMEM218A2RU14 115 aa8.62□□□□□ -1.03
LINC00539-204ENST00000608957 RBMY1BA6NDE4 496 aaKnown RBP8.62□□□□□ -1.03
LINC00539-204ENST00000608957 RBMY1EA6NEQ0 496 aaKnown RBP8.62□□□□□ -1.03
LINC00539-204ENST00000608957 FAM74A7A6NL05 159 aa8.62□□□□□ -1.03
LINC00539-204ENST00000608957 KRBOX1C9JBD0 128 aa8.62□□□□□ -1.03
LINC00539-204ENST00000608957 NDUFS6O75380 124 aaKnown RBP8.62□□□□□ -1.03
LINC00539-204ENST00000608957 SRP19P09132 144 aaKnown RBP8.62□□□□□ -1.03
LINC00539-204ENST00000608957 SFTA3P0C7M3 94 aa8.62□□□□□ -1.03
LINC00539-204ENST00000608957 RBMY1DP0C7P1 496 aaKnown RBP8.62□□□□□ -1.03
LINC00539-204ENST00000608957 RPL7P18124 248 aaKnown RBP8.62□□□□□ -1.03
LINC00539-204ENST00000608957 CRYBB3P26998 211 aa8.62□□□□□ -1.03
LINC00539-204ENST00000608957 MEF2BQ02080 365 aaPredicted RBP8.62□□□□□ -1.03
LINC00539-204ENST00000608957 GTSCR1Q86UQ5 136 aa8.62□□□□□ -1.03
LINC00539-204ENST00000608957 DEFB125Q8N687 156 aa8.62□□□□□ -1.03
LINC00539-204ENST00000608957 LINC00052Q96N35 136 aa8.62□□□□□ -1.03
LINC00539-204ENST00000608957 YTHDF2Q9Y5A9 579 aaKnown RBP8.62□□□□□ -1.03
LINC00539-204ENST00000608957 C11orf94C9JXX5 98 aa8.61□□□□□ -1.03
LINC00539-204ENST00000608957 MRPS12O15235 138 aaKnown RBP8.61□□□□□ -1.03
LINC00539-204ENST00000608957 ZNF207O43670 478 aaKnown RBP8.61□□□□□ -1.03
LINC00539-204ENST00000608957 IGLC2P0DOY2 106 aa8.61□□□□□ -1.03
LINC00539-204ENST00000608957 NPPCP23582 126 aa8.61□□□□□ -1.03
LINC00539-204ENST00000608957 ATP5G3P48201 142 aa8.61□□□□□ -1.03
LINC00539-204ENST00000608957 GUCA2BQ16661 112 aa8.61□□□□□ -1.03
LINC00539-204ENST00000608957 CST9LP1Q5W188 147 aa8.61□□□□□ -1.03
LINC00539-204ENST00000608957 TXNDC17Q9BRA2 123 aa8.61□□□□□ -1.03
LINC00539-204ENST00000608957 SLC35B3Q9H1N7 401 aa8.61□□□□□ -1.03
LINC00539-204ENST00000608957 ZMAT4Q9H898 229 aa8.61□□□□□ -1.03
LINC00539-204ENST00000608957 RETNQ9HD89 108 aa8.61□□□□□ -1.03
LINC00539-204ENST00000608957 U3KQE9 123 aa8.61□□□□□ -1.03
LINC00539-204ENST00000608957 A0A1W2PRE2 83 aa8.6□□□□□ -1.03
LINC00539-204ENST00000608957 BUB3O43684 328 aa8.6□□□□□ -1.03
LINC00539-204ENST00000608957 HIST1H1EP10412 219 aaKnown RBP8.6□□□□□ -1.03
LINC00539-204ENST00000608957 ADCYAP1P18509 176 aa8.6□□□□□ -1.03
LINC00539-204ENST00000608957 C1orf194Q5T5A4 169 aa8.6□□□□□ -1.03
LINC00539-204ENST00000608957 OR8I2Q8N0Y5 310 aa8.6□□□□□ -1.03
LINC00539-204ENST00000608957 CYB561D1Q8N8Q1 229 aa8.6□□□□□ -1.03
LINC00539-204ENST00000608957 BLNKQ8WV28 456 aa8.6□□□□□ -1.03
LINC00539-204ENST00000608957 TUBA4BQ9H853 241 aa8.6□□□□□ -1.03
LINC00539-204ENST00000608957 SRD5A3Q9H8P0 318 aa8.6□□□□□ -1.03
LINC00539-204ENST00000608957 DAZ1Q9NQZ3 744 aaKnown RBP8.6□□□□□ -1.03
LINC00539-204ENST00000608957 UFC1Q9Y3C8 167 aa8.6□□□□□ -1.03
LINC00539-204ENST00000608957 CSMD3Q7Z407 3707 aa8.59□□□□□ -1.03
LINC00539-204ENST00000608957 IGHV3-49A0A0A0MS15 119 aa8.59□□□□□ -1.03
LINC00539-204ENST00000608957 IGHV3-66A0A0C4DH42 116 aa8.59□□□□□ -1.03
LINC00539-204ENST00000608957 OR11H12B2RN74 326 aa8.59□□□□□ -1.03
LINC00539-204ENST00000608957 GGTLC3B5MD39 225 aa8.59□□□□□ -1.03
LINC00539-204ENST00000608957 F6UZH7 168 aa8.59□□□□□ -1.03
LINC00539-204ENST00000608957 F8W036 122 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms