RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 PPP1R1AQ13522 171 aa10.45□□□□□ -0.74
CTSA-216ENST00000607212 TMEM256Q8N2U0 113 aa10.45□□□□□ -0.74
CTSA-216ENST00000607212 LRTM2Q8N967 370 aa10.45□□□□□ -0.74
CTSA-216ENST00000607212 SOSTQ9BQB4 213 aa10.45□□□□□ -0.74
CTSA-216ENST00000607212 SHANK2-AS3Q9BTD1 123 aa10.45□□□□□ -0.74
CTSA-216ENST00000607212 PSENENQ9NZ42 101 aa10.45□□□□□ -0.74
CTSA-216ENST00000607212 DNAH11Q96DT5 4516 aa10.44□□□□□ -0.74
CTSA-216ENST00000607212 CBY3A6NI87 242 aa10.44□□□□□ -0.74
CTSA-216ENST00000607212 TSPOP30536 169 aa10.44□□□□□ -0.74
CTSA-216ENST00000607212 OR5I1Q13606 314 aa10.44□□□□□ -0.74
CTSA-216ENST00000607212 BAK1Q16611 211 aa10.44□□□□□ -0.74
CTSA-216ENST00000607212 TMEM144Q7Z5S9 345 aa10.44□□□□□ -0.74
CTSA-216ENST00000607212 OR8A1Q8NGG7 326 aa10.44□□□□□ -0.74
CTSA-216ENST00000607212 C16orf74Q96GX8 76 aa10.44□□□□□ -0.74
CTSA-216ENST00000607212 C17orf77Q96MU5 243 aa10.44□□□□□ -0.74
CTSA-216ENST00000607212 UHRF2Q96PU4 802 aa10.44□□□□□ -0.74
CTSA-216ENST00000607212 SLC25A21Q9BQT8 299 aaPredicted RBP10.44□□□□□ -0.74
CTSA-216ENST00000607212 TIMM8BQ9Y5J9 83 aaPredicted RBP10.44□□□□□ -0.74
CTSA-216ENST00000607212 PRSS46E5RG02 174 aa10.43□□□□□ -0.74
CTSA-216ENST00000607212 SSSCA1O60232 199 aa10.43□□□□□ -0.74
CTSA-216ENST00000607212 SCGB1D2O95969 90 aa10.43□□□□□ -0.74
CTSA-216ENST00000607212 IL7P13232 177 aa10.43□□□□□ -0.74
CTSA-216ENST00000607212 TAS2R60P59551 318 aa10.43□□□□□ -0.74
CTSA-216ENST00000607212 POLR2GP62487 172 aaKnown RBP eCLIP10.43□□□□□ -0.74
CTSA-216ENST00000607212 PSG3Q16557 428 aa10.43□□□□□ -0.74
CTSA-216ENST00000607212 MAPKAPK5-AS1Q8N8E1 139 aa10.43□□□□□ -0.74
CTSA-216ENST00000607212 ZBTB8BQ8NAP8 495 aaPredicted RBP10.43□□□□□ -0.74
CTSA-216ENST00000607212 ZNRF2Q8NHG8 242 aa10.43□□□□□ -0.74
CTSA-216ENST00000607212 RNF141Q8WVD5 230 aa10.43□□□□□ -0.74
CTSA-216ENST00000607212 KRTAP4-5Q9BYR2 181 aa10.43□□□□□ -0.74
CTSA-216ENST00000607212 ARL6Q9H0F7 186 aa10.43□□□□□ -0.74
CTSA-216ENST00000607212 NOP10Q9NPE3 64 aaKnown RBP10.43□□□□□ -0.74
CTSA-216ENST00000607212 MGAT4CQ9UBM8 478 aa10.43□□□□□ -0.74
CTSA-216ENST00000607212 CDKN1BP46527 198 aa10.42□□□□□ -0.74
CTSA-216ENST00000607212 INPP1P49441 399 aa10.42□□□□□ -0.74
CTSA-216ENST00000607212 SSX7Q7RTT5 188 aa10.42□□□□□ -0.74
CTSA-216ENST00000607212 CCDC28AQ8IWP9 274 aa10.42□□□□□ -0.74
CTSA-216ENST00000607212 RPUSD4Q96CM3 377 aaKnown RBP10.42□□□□□ -0.74
CTSA-216ENST00000607212 LINC00588Q9Y4M8 146 aa10.42□□□□□ -0.74
CTSA-216ENST00000607212 ABCA13Q86UQ4 5058 aa10.42□□□□□ -0.74
CTSA-216ENST00000607212 PKD1P98161 4303 aa10.42□□□□□ -0.74
CTSA-216ENST00000607212 ADAP1O75689 374 aa10.41□□□□□ -0.74
CTSA-216ENST00000607212 SNRPCP09234 159 aaKnown RBP10.41□□□□□ -0.74
CTSA-216ENST00000607212 CXCL3P19876 107 aa10.41□□□□□ -0.74
CTSA-216ENST00000607212 SELENOTP62341 195 aa10.41□□□□□ -0.74
CTSA-216ENST00000607212 ASAH1Q13510 395 aa10.41□□□□□ -0.74
CTSA-216ENST00000607212 OR10J6PQ8NGY7 276 aa10.41□□□□□ -0.74
CTSA-216ENST00000607212 TRIM63Q969Q1 353 aa10.41□□□□□ -0.74
CTSA-216ENST00000607212 GNPNAT1Q96EK6 184 aaPredicted RBP10.41□□□□□ -0.74
CTSA-216ENST00000607212 RNF24Q9Y225 148 aa10.41□□□□□ -0.74
CTSA-216ENST00000607212 A0A0J9YY99 117 aa10.4□□□□□ -0.74
CTSA-216ENST00000607212 PLAC8L1A1L4L8 177 aa10.4□□□□□ -0.74
CTSA-216ENST00000607212 J3KRW8 73 aa10.4□□□□□ -0.74
CTSA-216ENST00000607212 METTL15P1P0C7V9 234 aa10.4□□□□□ -0.74
CTSA-216ENST00000607212 SPATA12Q7Z6I5 190 aa10.4□□□□□ -0.74
CTSA-216ENST00000607212 NRARPQ7Z6K4 114 aa10.4□□□□□ -0.74
CTSA-216ENST00000607212 ARV1Q9H2C2 271 aa10.4□□□□□ -0.74
CTSA-216ENST00000607212 A0A087X0K7 114 aa10.39□□□□□ -0.75
CTSA-216ENST00000607212 H7BYZ3 331 aa10.39□□□□□ -0.75
CTSA-216ENST00000607212 GOSR2O14653 212 aa10.39□□□□□ -0.75
CTSA-216ENST00000607212 CCNKO75909 580 aa10.39□□□□□ -0.75
CTSA-216ENST00000607212 RLN2P04090 185 aa10.39□□□□□ -0.75
CTSA-216ENST00000607212 SLC38A11Q08AI6 406 aa10.39□□□□□ -0.75
CTSA-216ENST00000607212 TTC32Q5I0X7 151 aa10.39□□□□□ -0.75
CTSA-216ENST00000607212 ZNF493Q6ZR52 646 aa10.39□□□□□ -0.75
CTSA-216ENST00000607212 OR10P1Q8NGE3 313 aa10.39□□□□□ -0.75
CTSA-216ENST00000607212 TMEM263Q8WUH6 116 aaKnown RBP10.39□□□□□ -0.75
CTSA-216ENST00000607212 Q9H8V8 135 aa10.39□□□□□ -0.75
CTSA-216ENST00000607212 NPVFQ9HCQ7 196 aa10.39□□□□□ -0.75
CTSA-216ENST00000607212 TRAV26-1A0A087WT03 109 aa10.38□□□□□ -0.75
CTSA-216ENST00000607212 GAGE12BA1L429 117 aa10.38□□□□□ -0.75
CTSA-216ENST00000607212 C9orf170A2RU37 121 aa10.38□□□□□ -0.75
CTSA-216ENST00000607212 PMS2P5A8MQ11 134 aa10.38□□□□□ -0.75
CTSA-216ENST00000607212 SNURFLB1AK76 121 aa10.38□□□□□ -0.75
CTSA-216ENST00000607212 PLA2G10O15496 165 aa10.38□□□□□ -0.75
CTSA-216ENST00000607212 COX7A2P2O60397 106 aa10.38□□□□□ -0.75
CTSA-216ENST00000607212 CDK2AP2O75956 126 aa10.38□□□□□ -0.75
CTSA-216ENST00000607212 GAGE7O76087 117 aa10.38□□□□□ -0.75
CTSA-216ENST00000607212 GAGE12FP0CL80 117 aa10.38□□□□□ -0.75
CTSA-216ENST00000607212 GAGE12GP0CL81 117 aa10.38□□□□□ -0.75
CTSA-216ENST00000607212 GAGE12IP0CL82 117 aa10.38□□□□□ -0.75
CTSA-216ENST00000607212 DLK1P80370 383 aa10.38□□□□□ -0.75
CTSA-216ENST00000607212 TEPPQ6URK8 271 aa10.38□□□□□ -0.75
CTSA-216ENST00000607212 LCN15Q6UWW0 184 aa10.38□□□□□ -0.75
CTSA-216ENST00000607212 AKAP14Q86UN6 197 aa10.38□□□□□ -0.75
CTSA-216ENST00000607212 SLC50A1Q9BRV3 221 aa10.38□□□□□ -0.75
CTSA-216ENST00000607212 PARD6GQ9BYG4 376 aaPredicted RBP10.38□□□□□ -0.75
CTSA-216ENST00000607212 H3BTX0 84 aa10.37□□□□□ -0.75
CTSA-216ENST00000607212 M6PRP20645 277 aa10.37□□□□□ -0.75
CTSA-216ENST00000607212 PLP1P60201 277 aa10.37□□□□□ -0.75
CTSA-216ENST00000607212 UBE2MP61081 183 aaKnown RBP10.37□□□□□ -0.75
CTSA-216ENST00000607212 ID3Q02535 119 aa10.37□□□□□ -0.75
CTSA-216ENST00000607212 LINC00305Q7Z4B0 112 aa10.37□□□□□ -0.75
CTSA-216ENST00000607212 ZNF546Q86UE3 836 aa10.37□□□□□ -0.75
CTSA-216ENST00000607212 SMIM8Q96KF7 97 aa10.37□□□□□ -0.75
CTSA-216ENST00000607212 GSKIPQ9P0R6 139 aa10.37□□□□□ -0.75
CTSA-216ENST00000607212 LINC00854A0A1B0GVQ3 168 aa10.36□□□□□ -0.75
CTSA-216ENST00000607212 CXCL2P19875 107 aa10.36□□□□□ -0.75
CTSA-216ENST00000607212 C4orf46Q504U0 113 aa10.36□□□□□ -0.75
CTSA-216ENST00000607212 TRIQKQ629K1 86 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms