RNA–Protein interactions for RNA: ENST00000603731.1

HERPUD2-207, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-207ENST00000603731 TM4SF20Q53R12 229 aa9.69□□□□□ -0.86
HERPUD2-207ENST00000603731 C16orf54Q6UWD8 224 aa9.69□□□□□ -0.86
HERPUD2-207ENST00000603731 REC114Q7Z4M0 266 aa9.69□□□□□ -0.86
HERPUD2-207ENST00000603731 C1QL4Q86Z23 238 aa9.69□□□□□ -0.86
HERPUD2-207ENST00000603731 OR11H1Q8NG94 326 aa9.69□□□□□ -0.86
HERPUD2-207ENST00000603731 CITED2Q99967 270 aaPredicted RBP9.69□□□□□ -0.86
HERPUD2-207ENST00000603731 ELOVL1Q9BW60 279 aa9.69□□□□□ -0.86
HERPUD2-207ENST00000603731 TRBV19A0A075B6N1 114 aa9.68□□□□□ -0.86
HERPUD2-207ENST00000603731 SCO2A0A1W2PP80 73 aa9.68□□□□□ -0.86
HERPUD2-207ENST00000603731 PGPA6NDG6 321 aa9.68□□□□□ -0.86
HERPUD2-207ENST00000603731 ZNF727A8MUV8 499 aa9.68□□□□□ -0.86
HERPUD2-207ENST00000603731 LGALS9O00182 355 aa9.68□□□□□ -0.86
HERPUD2-207ENST00000603731 SLC25A5P05141 298 aaKnown RBP9.68□□□□□ -0.86
HERPUD2-207ENST00000603731 ADCYAP1P18509 176 aa9.68□□□□□ -0.86
HERPUD2-207ENST00000603731 SYNJ2BPP57105 145 aa9.68□□□□□ -0.86
HERPUD2-207ENST00000603731 PSG9Q00887 426 aa9.68□□□□□ -0.86
HERPUD2-207ENST00000603731 ZNF674Q2M3X9 581 aa9.68□□□□□ -0.86
HERPUD2-207ENST00000603731 DEFB136Q30KP8 78 aa9.68□□□□□ -0.86
HERPUD2-207ENST00000603731 C8orf86Q6ZUL3 223 aa9.68□□□□□ -0.86
HERPUD2-207ENST00000603731 RPUSD4Q96CM3 377 aaKnown RBP9.68□□□□□ -0.86
HERPUD2-207ENST00000603731 Q9H3A6 140 aa9.68□□□□□ -0.86
HERPUD2-207ENST00000603731 AAMDCQ9H7C9 122 aa9.68□□□□□ -0.86
HERPUD2-207ENST00000603731 OTORQ9NRC9 128 aa9.68□□□□□ -0.86
HERPUD2-207ENST00000603731 CARHSP1Q9Y2V2 147 aaKnown RBP9.68□□□□□ -0.86
HERPUD2-207ENST00000603731 GGTLC3B5MD39 225 aa9.67□□□□□ -0.86
HERPUD2-207ENST00000603731 M0QZ24 198 aa9.67□□□□□ -0.86
HERPUD2-207ENST00000603731 SLURP1P55000 103 aa9.67□□□□□ -0.86
HERPUD2-207ENST00000603731 FOXL1Q12952 345 aa9.67□□□□□ -0.86
HERPUD2-207ENST00000603731 PDE6HQ13956 83 aa9.67□□□□□ -0.86
HERPUD2-207ENST00000603731 FAM74A3Q4VXF1 159 aa9.67□□□□□ -0.86
HERPUD2-207ENST00000603731 C10orf91Q5T1B1 145 aa9.67□□□□□ -0.86
HERPUD2-207ENST00000603731 FAM90A2PQ658T7 463 aa9.67□□□□□ -0.86
HERPUD2-207ENST00000603731 SIGLEC15Q6ZMC9 328 aa9.67□□□□□ -0.86
HERPUD2-207ENST00000603731 LYPD1Q8N2G4 141 aa9.67□□□□□ -0.86
HERPUD2-207ENST00000603731 SVBPQ8N300 66 aa9.67□□□□□ -0.86
HERPUD2-207ENST00000603731 CMTM2Q8TAZ6 248 aa9.67□□□□□ -0.86
HERPUD2-207ENST00000603731 C17orf77Q96MU5 243 aa9.67□□□□□ -0.86
HERPUD2-207ENST00000603731 TCEAL7Q9BRU2 100 aa9.67□□□□□ -0.86
HERPUD2-207ENST00000603731 RHPN1-AS1Q9BWJ2 59 aa9.67□□□□□ -0.86
HERPUD2-207ENST00000603731 PARLQ9H300 379 aa9.67□□□□□ -0.86
HERPUD2-207ENST00000603731 SMPXQ9UHP9 88 aa9.67□□□□□ -0.86
HERPUD2-207ENST00000603731 A0A087X0K7 114 aa9.66□□□□□ -0.86
HERPUD2-207ENST00000603731 NDUFB4O95168 129 aa9.66□□□□□ -0.86
HERPUD2-207ENST00000603731 AKR1C3P42330 323 aa9.66□□□□□ -0.86
HERPUD2-207ENST00000603731 MEOX2P50222 304 aa9.66□□□□□ -0.86
HERPUD2-207ENST00000603731 KLF5Q13887 457 aaPredicted RBP9.66□□□□□ -0.86
HERPUD2-207ENST00000603731 HIST2H2BDQ6DRA6 164 aa9.66□□□□□ -0.86
HERPUD2-207ENST00000603731 CCDC28AQ8IWP9 274 aa9.66□□□□□ -0.86
HERPUD2-207ENST00000603731 C5orf17Q8NAS9 161 aa9.66□□□□□ -0.86
HERPUD2-207ENST00000603731 GLMPQ8WWB7 406 aa9.66□□□□□ -0.86
HERPUD2-207ENST00000603731 C11orf52Q96A22 123 aa9.66□□□□□ -0.86
HERPUD2-207ENST00000603731 DUX3Q96PT4 197 aa9.66□□□□□ -0.86
HERPUD2-207ENST00000603731 SMIM7Q9BQ49 75 aa9.66□□□□□ -0.86
HERPUD2-207ENST00000603731 NIPSNAP3BQ9BS92 247 aa9.66□□□□□ -0.86
HERPUD2-207ENST00000603731 PEMTQ9UBM1 199 aa9.66□□□□□ -0.86
HERPUD2-207ENST00000603731 RPH3ALQ9UNE2 315 aa9.66□□□□□ -0.86
HERPUD2-207ENST00000603731 SMAD5-AS1Q9Y6J3 95 aa9.66□□□□□ -0.86
HERPUD2-207ENST00000603731 HELTA6NFD8 242 aa9.65□□□□□ -0.86
HERPUD2-207ENST00000603731 A8MWP6 167 aa9.65□□□□□ -0.86
HERPUD2-207ENST00000603731 CCL24O00175 119 aa9.65□□□□□ -0.86
HERPUD2-207ENST00000603731 CHEK1O14757 476 aa9.65□□□□□ -0.86
HERPUD2-207ENST00000603731 ZNF253O75346 499 aa9.65□□□□□ -0.86
HERPUD2-207ENST00000603731 SNAPINO95295 136 aa9.65□□□□□ -0.86
HERPUD2-207ENST00000603731 CNN1P51911 297 aaKnown RBP9.65□□□□□ -0.86
HERPUD2-207ENST00000603731 RPL11P62913 178 aaKnown RBP9.65□□□□□ -0.86
HERPUD2-207ENST00000603731 EXOC3-AS1Q8N2X6 119 aa9.65□□□□□ -0.86
HERPUD2-207ENST00000603731 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.65□□□□□ -0.86
HERPUD2-207ENST00000603731 HIST1H2BAQ96A08 127 aa9.65□□□□□ -0.86
HERPUD2-207ENST00000603731 TVP23CQ96ET8 276 aa9.65□□□□□ -0.86
HERPUD2-207ENST00000603731 SLC50A1Q9BRV3 221 aa9.65□□□□□ -0.86
HERPUD2-207ENST00000603731 EPDR1Q9UM22 224 aa9.65□□□□□ -0.86
HERPUD2-207ENST00000603731 TMEM213A2RRL7 107 aa9.64□□□□□ -0.87
HERPUD2-207ENST00000603731 M0R036 132 aa9.64□□□□□ -0.87
HERPUD2-207ENST00000603731 SLC17A3O00476 420 aa9.64□□□□□ -0.87
HERPUD2-207ENST00000603731 PEX7O00628 323 aa9.64□□□□□ -0.87
HERPUD2-207ENST00000603731 MYCNOSP40205 109 aa9.64□□□□□ -0.87
HERPUD2-207ENST00000603731 CSN1S1P47710 185 aa9.64□□□□□ -0.87
HERPUD2-207ENST00000603731 GUCA2BQ16661 112 aa9.64□□□□□ -0.87
HERPUD2-207ENST00000603731 TMEM241Q24JQ0 296 aa9.64□□□□□ -0.87
HERPUD2-207ENST00000603731 NSUN5P1Q3KNT7 163 aa9.64□□□□□ -0.87
HERPUD2-207ENST00000603731 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.64□□□□□ -0.87
HERPUD2-207ENST00000603731 TCF24Q7RTU0 167 aa9.64□□□□□ -0.87
HERPUD2-207ENST00000603731 NDUFA11Q86Y39 141 aa9.64□□□□□ -0.87
HERPUD2-207ENST00000603731 RAX2Q96IS3 184 aa9.64□□□□□ -0.87
HERPUD2-207ENST00000603731 NAT8Q9UHE5 227 aa9.64□□□□□ -0.87
HERPUD2-207ENST00000603731 C2orf70A6NJV1 201 aa9.63□□□□□ -0.87
HERPUD2-207ENST00000603731 K7EQM0 130 aa9.63□□□□□ -0.87
HERPUD2-207ENST00000603731 GNG5P63218 68 aa9.63□□□□□ -0.87
HERPUD2-207ENST00000603731 ATG101Q9BSB4 218 aa9.63□□□□□ -0.87
HERPUD2-207ENST00000603731 ZNF331Q9NQX6 463 aaPredicted RBP9.63□□□□□ -0.87
HERPUD2-207ENST00000603731 PRELID1Q9Y255 219 aa9.63□□□□□ -0.87
HERPUD2-207ENST00000603731 TRRAPQ9Y4A5 3859 aa9.62□□□□□ -0.87
HERPUD2-207ENST00000603731 S100A9P06702 114 aaKnown RBP9.62□□□□□ -0.87
HERPUD2-207ENST00000603731 FOLR2P14207 255 aa9.62□□□□□ -0.87
HERPUD2-207ENST00000603731 EDN2P20800 178 aa9.62□□□□□ -0.87
HERPUD2-207ENST00000603731 CBLN1P23435 193 aa9.62□□□□□ -0.87
HERPUD2-207ENST00000603731 RPL35P42766 123 aaKnown RBP9.62□□□□□ -0.87
HERPUD2-207ENST00000603731 UBE2G1P62253 170 aa9.62□□□□□ -0.87
HERPUD2-207ENST00000603731 PNRC1Q12796 327 aaPredicted RBP9.62□□□□□ -0.87
HERPUD2-207ENST00000603731 CLRN3Q8NCR9 226 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms