RNA–Protein interactions for RNA: ENST00000600879.5

HIF3A-219, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-219ENST00000600879 AGPAT2O15120 278 aa7.1□□□□□ -1.27
HIF3A-219ENST00000600879 TOMM40O96008 361 aa7.1□□□□□ -1.27
HIF3A-219ENST00000600879 IGKV1-17P01599 117 aa7.1□□□□□ -1.27
HIF3A-219ENST00000600879 PSG1P11464 419 aa7.1□□□□□ -1.27
HIF3A-219ENST00000600879 YPEL3P61236 119 aaPredicted RBP7.1□□□□□ -1.27
HIF3A-219ENST00000600879 ZNF90Q03938 601 aa7.1□□□□□ -1.27
HIF3A-219ENST00000600879 RAB31Q13636 194 aa7.1□□□□□ -1.27
HIF3A-219ENST00000600879 TMEM41BQ5BJD5 291 aa7.1□□□□□ -1.27
HIF3A-219ENST00000600879 CYP2G1PQ6ZSU1 146 aa7.1□□□□□ -1.27
HIF3A-219ENST00000600879 SCGB1C1Q8TD33 95 aa7.1□□□□□ -1.27
HIF3A-219ENST00000600879 Q8WTZ3 238 aa7.1□□□□□ -1.27
HIF3A-219ENST00000600879 MGST2Q99735 147 aa7.1□□□□□ -1.27
HIF3A-219ENST00000600879 ARPC5LQ9BPX5 153 aa7.1□□□□□ -1.27
HIF3A-219ENST00000600879 WDR61Q9GZS3 305 aaKnown RBP7.1□□□□□ -1.27
HIF3A-219ENST00000600879 VSIRQ9H7M9 311 aa7.1□□□□□ -1.27
HIF3A-219ENST00000600879 XCL2Q9UBD3 114 aa7.1□□□□□ -1.27
HIF3A-219ENST00000600879 PUS1Q9Y606 427 aaKnown RBP eCLIP7.1□□□□□ -1.27
HIF3A-219ENST00000600879 UBR4Q5T4S7 5183 aa7.09□□□□□ -1.27
HIF3A-219ENST00000600879 BORCS7-ASMTA0A0B4J1R7 106 aa7.09□□□□□ -1.27
HIF3A-219ENST00000600879 KANTRA0A1W2PQU2 76 aa7.09□□□□□ -1.27
HIF3A-219ENST00000600879 K7EQG2 157 aa7.09□□□□□ -1.27
HIF3A-219ENST00000600879 TAAR5O14804 337 aa7.09□□□□□ -1.27
HIF3A-219ENST00000600879 MPDU1O75352 247 aa7.09□□□□□ -1.27
HIF3A-219ENST00000600879 RD3LP0DJH9 198 aa7.09□□□□□ -1.27
HIF3A-219ENST00000600879 GATA2P23769 480 aaPredicted RBP7.09□□□□□ -1.27
HIF3A-219ENST00000600879 CAMLGP49069 296 aa7.09□□□□□ -1.27
HIF3A-219ENST00000600879 ZNF266Q14584 549 aa7.09□□□□□ -1.27
HIF3A-219ENST00000600879 LGALSLQ3ZCW2 172 aaPredicted RBP7.09□□□□□ -1.27
HIF3A-219ENST00000600879 TMUB2Q71RG4 321 aa7.09□□□□□ -1.27
HIF3A-219ENST00000600879 ZNF709Q8N972 641 aa7.09□□□□□ -1.27
HIF3A-219ENST00000600879 BPIFCQ8NFQ6 507 aa7.09□□□□□ -1.27
HIF3A-219ENST00000600879 ARL6Q9H0F7 186 aa7.09□□□□□ -1.27
HIF3A-219ENST00000600879 DMBT1Q9UGM3 2413 aaPredicted RBP7.09□□□□□ -1.27
HIF3A-219ENST00000600879 DNAH5Q8TE73 4624 aa7.08□□□□□ -1.28
HIF3A-219ENST00000600879 IGHV3OR16-12A0A075B7B8 117 aa7.08□□□□□ -1.28
HIF3A-219ENST00000600879 TRAV2A0A0B4J234 112 aa7.08□□□□□ -1.28
HIF3A-219ENST00000600879 C17orf112F2Z3M2 114 aa7.08□□□□□ -1.28
HIF3A-219ENST00000600879 BCL2L11O43521 198 aa7.08□□□□□ -1.28
HIF3A-219ENST00000600879 CFDP00746 253 aaPredicted RBP7.08□□□□□ -1.28
HIF3A-219ENST00000600879 IL4P05112 153 aa7.08□□□□□ -1.28
HIF3A-219ENST00000600879 CD5P06127 495 aa7.08□□□□□ -1.28
HIF3A-219ENST00000600879 NKX2-5P52952 324 aaPredicted RBP7.08□□□□□ -1.28
HIF3A-219ENST00000600879 LYZP61626 148 aa7.08□□□□□ -1.28
HIF3A-219ENST00000600879 SELENOTP62341 195 aa7.08□□□□□ -1.28
HIF3A-219ENST00000600879 OPCMLQ14982 345 aa7.08□□□□□ -1.28
HIF3A-219ENST00000600879 MIC13Q5XKP0 118 aa7.08□□□□□ -1.28
HIF3A-219ENST00000600879 RPL7L1Q6DKI1 246 aaKnown RBP7.08□□□□□ -1.28
HIF3A-219ENST00000600879 C9orf62Q8N4C0 152 aa7.08□□□□□ -1.28
HIF3A-219ENST00000600879 HSD17B11Q8NBQ5 300 aa7.08□□□□□ -1.28
HIF3A-219ENST00000600879 OR51G1Q8NGK1 321 aa7.08□□□□□ -1.28
HIF3A-219ENST00000600879 PBDC1Q9BVG4 233 aa7.08□□□□□ -1.28
HIF3A-219ENST00000600879 PARD6GQ9BYG4 376 aaPredicted RBP7.08□□□□□ -1.28
HIF3A-219ENST00000600879 ZFAND3Q9H8U3 227 aa7.08□□□□□ -1.28
HIF3A-219ENST00000600879 SLC45A2Q9UMX9 530 aa7.08□□□□□ -1.28
HIF3A-219ENST00000600879 BOLA2-SMG1P6H3BVE0 249 aa7.07□□□□□ -1.28
HIF3A-219ENST00000600879 LINC00869P0C866 280 aa7.07□□□□□ -1.28
HIF3A-219ENST00000600879 SPART-AS1P0CW21 52 aa7.07□□□□□ -1.28
HIF3A-219ENST00000600879 FXYD7P58549 80 aa7.07□□□□□ -1.28
HIF3A-219ENST00000600879 PSMG4Q5JS54 123 aa7.07□□□□□ -1.28
HIF3A-219ENST00000600879 TMEM182Q6ZP80 229 aaPredicted RBP7.07□□□□□ -1.28
HIF3A-219ENST00000600879 RNF125Q96EQ8 232 aa7.07□□□□□ -1.28
HIF3A-219ENST00000600879 RSG1Q9BU20 258 aa7.07□□□□□ -1.28
HIF3A-219ENST00000600879 ZNF471Q9BX82 626 aaPredicted RBP7.07□□□□□ -1.28
HIF3A-219ENST00000600879 NPCDR1Q9BY65 106 aa7.07□□□□□ -1.28
HIF3A-219ENST00000600879 CYTL1Q9NRR1 136 aa7.07□□□□□ -1.28
HIF3A-219ENST00000600879 KCNIP2Q9NS61 270 aa7.07□□□□□ -1.28
HIF3A-219ENST00000600879 PXMP4Q9Y6I8 212 aa7.07□□□□□ -1.28
HIF3A-219ENST00000600879 HNRNPCP07910 306 aaKnown RBP eCLIP7.06□□□□□ -1.28
HIF3A-219ENST00000600879 OR5G3P0C626 314 aa7.06□□□□□ -1.28
HIF3A-219ENST00000600879 INAFM2P0DMQ5 153 aa7.06□□□□□ -1.28
HIF3A-219ENST00000600879 ORM2P19652 201 aa7.06□□□□□ -1.28
HIF3A-219ENST00000600879 NPPCP23582 126 aa7.06□□□□□ -1.28
HIF3A-219ENST00000600879 ATP6V0CP27449 155 aa7.06□□□□□ -1.28
HIF3A-219ENST00000600879 RPL29P47914 159 aaKnown RBP7.06□□□□□ -1.28
HIF3A-219ENST00000600879 B2MP61769 119 aa7.06□□□□□ -1.28
HIF3A-219ENST00000600879 EIF5AP63241 154 aaKnown RBP7.06□□□□□ -1.28
HIF3A-219ENST00000600879 USF2Q15853 346 aaPredicted RBP7.06□□□□□ -1.28
HIF3A-219ENST00000600879 RNF212Q495C1 297 aa7.06□□□□□ -1.28
HIF3A-219ENST00000600879 TMEM88Q6PEY1 159 aa7.06□□□□□ -1.28
HIF3A-219ENST00000600879 Q6ZRG5 221 aa7.06□□□□□ -1.28
HIF3A-219ENST00000600879 SPATA12Q7Z6I5 190 aa7.06□□□□□ -1.28
HIF3A-219ENST00000600879 OR1B1Q8NGR6 318 aa7.06□□□□□ -1.28
HIF3A-219ENST00000600879 DCANP1Q8TF63 244 aa7.06□□□□□ -1.28
HIF3A-219ENST00000600879 GRAMD2BQ96HH9 432 aa7.06□□□□□ -1.28
HIF3A-219ENST00000600879 METTL26Q96S19 204 aa7.06□□□□□ -1.28
HIF3A-219ENST00000600879 TMEM231Q9H6L2 316 aa7.06□□□□□ -1.28
HIF3A-219ENST00000600879 SLC39A9Q9NUM3 307 aa7.06□□□□□ -1.28
HIF3A-219ENST00000600879 DOK5Q9P104 306 aa7.06□□□□□ -1.28
HIF3A-219ENST00000600879 TIMM9Q9Y5J7 89 aa7.06□□□□□ -1.28
HIF3A-219ENST00000600879 NACAE9PAV3 2078 aa7.05□□□□□ -1.28
HIF3A-219ENST00000600879 HELTA6NFD8 242 aa7.05□□□□□ -1.28
HIF3A-219ENST00000600879 COX7A2P2O60397 106 aa7.05□□□□□ -1.28
HIF3A-219ENST00000600879 HYPMO75409 117 aa7.05□□□□□ -1.28
HIF3A-219ENST00000600879 IGKV3-20P01619 116 aa7.05□□□□□ -1.28
HIF3A-219ENST00000600879 PLP1P60201 277 aa7.05□□□□□ -1.28
HIF3A-219ENST00000600879 FFAR4Q5NUL3 377 aa7.05□□□□□ -1.28
HIF3A-219ENST00000600879 FAM222AQ5U5X8 452 aa7.05□□□□□ -1.28
HIF3A-219ENST00000600879 C6orf223Q8N319 242 aa7.05□□□□□ -1.28
HIF3A-219ENST00000600879 OR1L4Q8NGR5 311 aa7.05□□□□□ -1.28
HIF3A-219ENST00000600879 PPP1R14BQ96C90 147 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms