RNA–Protein interactions for RNA: ENST00000600841.1

NOTCH3-205, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-205ENST00000600841 MRPS12O15235 138 aaKnown RBP12.11□□□□□ -0.47
NOTCH3-205ENST00000600841 RLN2P04090 185 aa12.11□□□□□ -0.47
NOTCH3-205ENST00000600841 CXCL2P19875 107 aa12.11□□□□□ -0.47
NOTCH3-205ENST00000600841 CXCL3P19876 107 aa12.11□□□□□ -0.47
NOTCH3-205ENST00000600841 PRR20EP86478 221 aa12.11□□□□□ -0.47
NOTCH3-205ENST00000600841 PRR20CP86479 221 aa12.11□□□□□ -0.47
NOTCH3-205ENST00000600841 PRR20DP86480 221 aa12.11□□□□□ -0.47
NOTCH3-205ENST00000600841 PRR20BP86481 221 aa12.11□□□□□ -0.47
NOTCH3-205ENST00000600841 PRR20AP86496 221 aa12.11□□□□□ -0.47
NOTCH3-205ENST00000600841 ATP6V1FQ16864 119 aa12.11□□□□□ -0.47
NOTCH3-205ENST00000600841 MIC13Q5XKP0 118 aa12.11□□□□□ -0.47
NOTCH3-205ENST00000600841 AMTNQ6UX39 209 aa12.11□□□□□ -0.47
NOTCH3-205ENST00000600841 Q6ZTC4 211 aa12.11□□□□□ -0.47
NOTCH3-205ENST00000600841 BPIFA4PQ86YQ2 179 aa12.11□□□□□ -0.47
NOTCH3-205ENST00000600841 OR1L4Q8NGR5 311 aa12.11□□□□□ -0.47
NOTCH3-205ENST00000600841 NMES1Q9C002 83 aa12.11□□□□□ -0.47
NOTCH3-205ENST00000600841 DNAJC4Q9NNZ3 241 aa12.11□□□□□ -0.47
NOTCH3-205ENST00000600841 CELA1Q9UNI1 258 aa12.11□□□□□ -0.47
NOTCH3-205ENST00000600841 RFNGQ9Y644 331 aa12.11□□□□□ -0.47
NOTCH3-205ENST00000600841 TRAV10A0A0B4J240 114 aa12.1□□□□□ -0.47
NOTCH3-205ENST00000600841 AMBPP02760 352 aa12.1□□□□□ -0.47
NOTCH3-205ENST00000600841 RPL29P47914 159 aaKnown RBP12.1□□□□□ -0.47
NOTCH3-205ENST00000600841 TCTAP57738 103 aa12.1□□□□□ -0.47
NOTCH3-205ENST00000600841 CYCSP99999 105 aaKnown RBP12.1□□□□□ -0.47
NOTCH3-205ENST00000600841 OPCMLQ14982 345 aa12.1□□□□□ -0.47
NOTCH3-205ENST00000600841 PSG3Q16557 428 aa12.1□□□□□ -0.47
NOTCH3-205ENST00000600841 LCN15Q6UWW0 184 aa12.1□□□□□ -0.47
NOTCH3-205ENST00000600841 PFDN5Q99471 154 aa12.1□□□□□ -0.47
NOTCH3-205ENST00000600841 KMT2AQ03164 3969 aa12.1□□□□□ -0.47
NOTCH3-205ENST00000600841 IGLL5B9A064 214 aa12.09□□□□□ -0.47
NOTCH3-205ENST00000600841 E5RGE8 158 aa12.09□□□□□ -0.47
NOTCH3-205ENST00000600841 SSNA1O43805 119 aa12.09□□□□□ -0.47
NOTCH3-205ENST00000600841 PTTG1O95997 202 aa12.09□□□□□ -0.47
NOTCH3-205ENST00000600841 FGF7P21781 194 aa12.09□□□□□ -0.47
NOTCH3-205ENST00000600841 EMP1P54849 157 aa12.09□□□□□ -0.47
NOTCH3-205ENST00000600841 B2MP61769 119 aa12.09□□□□□ -0.47
NOTCH3-205ENST00000600841 C12orf74Q32Q52 190 aa12.09□□□□□ -0.47
NOTCH3-205ENST00000600841 LRRC37A5PQ49AS3 106 aa12.09□□□□□ -0.47
NOTCH3-205ENST00000600841 MORN5Q5VZ52 161 aa12.09□□□□□ -0.47
NOTCH3-205ENST00000600841 C1orf158Q8N1D5 194 aa12.09□□□□□ -0.47
NOTCH3-205ENST00000600841 OR11H7Q8NGC8 314 aa12.09□□□□□ -0.47
NOTCH3-205ENST00000600841 IGF2BP2-AS1Q96M15 143 aa12.09□□□□□ -0.47
NOTCH3-205ENST00000600841 SLC50A1Q9BRV3 221 aa12.09□□□□□ -0.47
NOTCH3-205ENST00000600841 TMEM208Q9BTX3 173 aa12.09□□□□□ -0.47
NOTCH3-205ENST00000600841 SLC25A31Q9H0C2 315 aa12.09□□□□□ -0.47
NOTCH3-205ENST00000600841 SLC39A9Q9NUM3 307 aa12.09□□□□□ -0.47
NOTCH3-205ENST00000600841 EPPK1P58107 5090 aaKnown RBP12.08□□□□□ -0.47
NOTCH3-205ENST00000600841 MPDU1O75352 247 aa12.08□□□□□ -0.48
NOTCH3-205ENST00000600841 HBE1P02100 147 aa12.08□□□□□ -0.48
NOTCH3-205ENST00000600841 SNRPCP09234 159 aaKnown RBP12.08□□□□□ -0.48
NOTCH3-205ENST00000600841 HIST1H1AQ02539 215 aaPredicted RBP12.08□□□□□ -0.48
NOTCH3-205ENST00000600841 SPINK13Q1W4C9 94 aa12.08□□□□□ -0.48
NOTCH3-205ENST00000600841 LGALS9CQ6DKI2 356 aa12.08□□□□□ -0.48
NOTCH3-205ENST00000600841 OR8A1Q8NGG7 326 aa12.08□□□□□ -0.48
NOTCH3-205ENST00000600841 CHAC2Q8WUX2 184 aa12.08□□□□□ -0.48
NOTCH3-205ENST00000600841 ZNF331Q9NQX6 463 aaPredicted RBP12.08□□□□□ -0.48
NOTCH3-205ENST00000600841 OR5AC2Q9NZP5 309 aa12.08□□□□□ -0.48
NOTCH3-205ENST00000600841 PXMP4Q9Y6I8 212 aa12.08□□□□□ -0.48
NOTCH3-205ENST00000600841 BOLA2-SMG1P6H3BVE0 249 aa12.07□□□□□ -0.48
NOTCH3-205ENST00000600841 M0R2Z0 102 aa12.07□□□□□ -0.48
NOTCH3-205ENST00000600841 INSP01308 110 aa12.07□□□□□ -0.48
NOTCH3-205ENST00000600841 SPART-AS1P0CW21 52 aa12.07□□□□□ -0.48
NOTCH3-205ENST00000600841 RHOBP62745 196 aa12.07□□□□□ -0.48
NOTCH3-205ENST00000600841 NHLH2Q02577 135 aa12.07□□□□□ -0.48
NOTCH3-205ENST00000600841 ZNF767PQ75MW2 155 aa12.07□□□□□ -0.48
NOTCH3-205ENST00000600841 OR5C1Q8NGR4 320 aa12.07□□□□□ -0.48
NOTCH3-205ENST00000600841 RPUSD4Q96CM3 377 aaKnown RBP12.07□□□□□ -0.48
NOTCH3-205ENST00000600841 PPP1R14DQ9NXH3 145 aa12.07□□□□□ -0.48
NOTCH3-205ENST00000600841 H0YIZ8 118 aa12.06□□□□□ -0.48
NOTCH3-205ENST00000600841 IGLC2P0DOY2 106 aa12.06□□□□□ -0.48
NOTCH3-205ENST00000600841 H2BFSP57053 126 aa12.06□□□□□ -0.48
NOTCH3-205ENST00000600841 RRN3P1Q2M238 152 aa12.06□□□□□ -0.48
NOTCH3-205ENST00000600841 NPCDR1Q9BY65 106 aa12.06□□□□□ -0.48
NOTCH3-205ENST00000600841 DEFB131BA0A096LNP1 70 aa12.05□□□□□ -0.48
NOTCH3-205ENST00000600841 TRAV5A0A0B4J249 113 aa12.05□□□□□ -0.48
NOTCH3-205ENST00000600841 TEX48A0A1B0GUV7 120 aa12.05□□□□□ -0.48
NOTCH3-205ENST00000600841 LOC102723971A0A1B0GUV8 181 aa12.05□□□□□ -0.48
NOTCH3-205ENST00000600841 H3BTX0 84 aa12.05□□□□□ -0.48
NOTCH3-205ENST00000600841 GUK1Q16774 197 aa12.05□□□□□ -0.48
NOTCH3-205ENST00000600841 THAP6Q8TBB0 222 aa12.05□□□□□ -0.48
NOTCH3-205ENST00000600841 PPP1R1CQ8WVI7 109 aa12.05□□□□□ -0.48
NOTCH3-205ENST00000600841 APLNQ9ULZ1 77 aa12.05□□□□□ -0.48
NOTCH3-205ENST00000600841 VPS13DQ5THJ4 4388 aa12.05□□□□□ -0.48
NOTCH3-205ENST00000600841 IGHV4-4A0A075B6R2 117 aa12.04□□□□□ -0.48
NOTCH3-205ENST00000600841 H3BQ15 152 aa12.04□□□□□ -0.48
NOTCH3-205ENST00000600841 SLC17A3O00476 420 aa12.04□□□□□ -0.48
NOTCH3-205ENST00000600841 CRXO43186 299 aaPredicted RBP12.04□□□□□ -0.48
NOTCH3-205ENST00000600841 PET100P0DJ07 73 aa12.04□□□□□ -0.48
NOTCH3-205ENST00000600841 CLINT1Q14677 625 aa12.04□□□□□ -0.48
NOTCH3-205ENST00000600841 RGS21Q2M5E4 152 aa12.04□□□□□ -0.48
NOTCH3-205ENST00000600841 BAP18Q8IXM2 172 aa12.04□□□□□ -0.48
NOTCH3-205ENST00000600841 RNF126Q9BV68 326 aa12.04□□□□□ -0.48
NOTCH3-205ENST00000600841 DKK2Q9UBU2 259 aa12.04□□□□□ -0.48
NOTCH3-205ENST00000600841 ALG5Q9Y673 324 aa12.04□□□□□ -0.48
NOTCH3-205ENST00000600841 TRAV12-2A0A075B6T6 113 aa12.03□□□□□ -0.48
NOTCH3-205ENST00000600841 PRB4P10163 310 aaPredicted RBP12.03□□□□□ -0.48
NOTCH3-205ENST00000600841 FAM222AQ5U5X8 452 aa12.03□□□□□ -0.48
NOTCH3-205ENST00000600841 OR10J6PQ8NGY7 276 aa12.03□□□□□ -0.48
NOTCH3-205ENST00000600841 SAT2Q96F10 170 aaPredicted RBP12.03□□□□□ -0.48
NOTCH3-205ENST00000600841 NIPSNAP3BQ9BS92 247 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms