RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 FGL1Q08830 312 aa11.41□□□□□ -0.58
RPS28-203ENST00000600659 Q5BKY6 102 aa11.41□□□□□ -0.58
RPS28-203ENST00000600659 FAM78BQ5VT40 261 aa11.41□□□□□ -0.58
RPS28-203ENST00000600659 Q6ZRG5 221 aa11.41□□□□□ -0.58
RPS28-203ENST00000600659 OR1L4Q8NGR5 311 aa11.41□□□□□ -0.58
RPS28-203ENST00000600659 SAT2Q96F10 170 aaPredicted RBP11.41□□□□□ -0.58
RPS28-203ENST00000600659 SLC35B3Q9H1N7 401 aa11.41□□□□□ -0.58
RPS28-203ENST00000600659 C11orf68Q9H3H3 251 aaKnown RBP11.41□□□□□ -0.58
RPS28-203ENST00000600659 WFDC1Q9HC57 220 aa11.41□□□□□ -0.58
RPS28-203ENST00000600659 RPRMQ9NS64 109 aa11.41□□□□□ -0.58
RPS28-203ENST00000600659 XCL2Q9UBD3 114 aa11.41□□□□□ -0.58
RPS28-203ENST00000600659 IGKV3-20P01619 116 aa11.4□□□□□ -0.58
RPS28-203ENST00000600659 CXCL2P19875 107 aa11.4□□□□□ -0.58
RPS28-203ENST00000600659 RPL12P30050 165 aaKnown RBP11.4□□□□□ -0.58
RPS28-203ENST00000600659 RGS21Q2M5E4 152 aa11.4□□□□□ -0.58
RPS28-203ENST00000600659 SPATA31B1PQ5VZV4 182 aa11.4□□□□□ -0.58
RPS28-203ENST00000600659 S100A7AQ86SG5 101 aa11.4□□□□□ -0.58
RPS28-203ENST00000600659 BPIFA4PQ86YQ2 179 aa11.4□□□□□ -0.58
RPS28-203ENST00000600659 PFDN5Q99471 154 aa11.4□□□□□ -0.58
RPS28-203ENST00000600659 ATP5SQ99766 215 aa11.4□□□□□ -0.58
RPS28-203ENST00000600659 MED28Q9H204 178 aa11.4□□□□□ -0.58
RPS28-203ENST00000600659 ZNF331Q9NQX6 463 aaPredicted RBP11.4□□□□□ -0.58
RPS28-203ENST00000600659 G3V3Q6 166 aa11.39□□□□□ -0.59
RPS28-203ENST00000600659 RBMY1A1P0DJD3 496 aaKnown RBP11.39□□□□□ -0.59
RPS28-203ENST00000600659 RBMY1CP0DJD4 496 aa11.39□□□□□ -0.59
RPS28-203ENST00000600659 PRB4P10163 310 aaPredicted RBP11.39□□□□□ -0.59
RPS28-203ENST00000600659 FXYD7P58549 80 aa11.39□□□□□ -0.59
RPS28-203ENST00000600659 RBMY1FQ15415 496 aaKnown RBP11.39□□□□□ -0.59
RPS28-203ENST00000600659 LCN15Q6UWW0 184 aa11.39□□□□□ -0.59
RPS28-203ENST00000600659 RNF24Q9Y225 148 aa11.39□□□□□ -0.59
RPS28-203ENST00000600659 IGHV4-28A0A0C4DH34 117 aa11.38□□□□□ -0.59
RPS28-203ENST00000600659 H3BTX0 84 aa11.38□□□□□ -0.59
RPS28-203ENST00000600659 DEFB4AO15263 64 aa11.38□□□□□ -0.59
RPS28-203ENST00000600659 ZNF705DP0CH99 300 aaPredicted RBP11.38□□□□□ -0.59
RPS28-203ENST00000600659 ZNF705BP0CI00 300 aaPredicted RBP11.38□□□□□ -0.59
RPS28-203ENST00000600659 CNN1P51911 297 aaKnown RBP11.38□□□□□ -0.59
RPS28-203ENST00000600659 PSG3Q16557 428 aa11.38□□□□□ -0.59
RPS28-203ENST00000600659 ZNF705AQ6ZN79 300 aaPredicted RBP11.38□□□□□ -0.59
RPS28-203ENST00000600659 OR4B1Q8NGF8 309 aa11.38□□□□□ -0.59
RPS28-203ENST00000600659 FAM167A-AS1Q96KT0 104 aa11.38□□□□□ -0.59
RPS28-203ENST00000600659 SMIM3Q9BZL3 60 aa11.38□□□□□ -0.59
RPS28-203ENST00000600659 HRH4Q9H3N8 390 aa11.38□□□□□ -0.59
RPS28-203ENST00000600659 ZNF586Q9NXT0 402 aa11.38□□□□□ -0.59
RPS28-203ENST00000600659 ZNF705FA8MVS1 300 aaPredicted RBP11.37□□□□□ -0.59
RPS28-203ENST00000600659 GIPP09681 153 aaPredicted RBP11.37□□□□□ -0.59
RPS28-203ENST00000600659 NUTF2P61970 127 aaKnown RBP11.37□□□□□ -0.59
RPS28-203ENST00000600659 PSG9Q00887 426 aa11.37□□□□□ -0.59
RPS28-203ENST00000600659 EBLN2Q6P2I7 272 aa11.37□□□□□ -0.59
RPS28-203ENST00000600659 SLC25A2Q9BXI2 301 aa11.37□□□□□ -0.59
RPS28-203ENST00000600659 C1QTNF4Q9BXJ3 329 aa11.37□□□□□ -0.59
RPS28-203ENST00000600659 PARD6GQ9BYG4 376 aaPredicted RBP11.37□□□□□ -0.59
RPS28-203ENST00000600659 RFNGQ9Y644 331 aa11.37□□□□□ -0.59
RPS28-203ENST00000600659 PRAC2D3DTV9 90 aa11.36□□□□□ -0.59
RPS28-203ENST00000600659 CRXO43186 299 aaPredicted RBP11.36□□□□□ -0.59
RPS28-203ENST00000600659 PYYP10082 97 aa11.36□□□□□ -0.59
RPS28-203ENST00000600659 MIFP14174 115 aa11.36□□□□□ -0.59
RPS28-203ENST00000600659 MIR17HGQ75NE6 70 aa11.36□□□□□ -0.59
RPS28-203ENST00000600659 C1orf158Q8N1D5 194 aa11.36□□□□□ -0.59
RPS28-203ENST00000600659 ZNF738Q8NE65 137 aa11.36□□□□□ -0.59
RPS28-203ENST00000600659 OR8A1Q8NGG7 326 aa11.36□□□□□ -0.59
RPS28-203ENST00000600659 SLC50A1Q9BRV3 221 aa11.36□□□□□ -0.59
RPS28-203ENST00000600659 TMEM14CQ9P0S9 112 aa11.36□□□□□ -0.59
RPS28-203ENST00000600659 NDUFB4O95168 129 aa11.35□□□□□ -0.59
RPS28-203ENST00000600659 PMS2P11Q13670 270 aa11.35□□□□□ -0.59
RPS28-203ENST00000600659 AQP10Q96PS8 301 aa11.35□□□□□ -0.59
RPS28-203ENST00000600659 MFFQ9GZY8 342 aa11.35□□□□□ -0.59
RPS28-203ENST00000600659 TRBV19A0A075B6N1 114 aa11.35□□□□□ -0.59
RPS28-203ENST00000600659 RNF222A6NCQ9 220 aa11.35□□□□□ -0.59
RPS28-203ENST00000600659 ZNF253O75346 499 aa11.35□□□□□ -0.59
RPS28-203ENST00000600659 ASB13Q8WXK3 278 aa11.35□□□□□ -0.59
RPS28-203ENST00000600659 RPUSD4Q96CM3 377 aaKnown RBP11.35□□□□□ -0.59
RPS28-203ENST00000600659 ZNF503Q96F45 646 aa11.35□□□□□ -0.59
RPS28-203ENST00000600659 NEU1Q99519 415 aa11.35□□□□□ -0.59
RPS28-203ENST00000600659 KCNIP2Q9NS61 270 aa11.35□□□□□ -0.59
RPS28-203ENST00000600659 DUSP14O95147 198 aaKnown RBP11.34□□□□□ -0.59
RPS28-203ENST00000600659 HIST1H1EP10412 219 aaKnown RBP11.34□□□□□ -0.59
RPS28-203ENST00000600659 NANOS2P60321 138 aaKnown RBP11.34□□□□□ -0.59
RPS28-203ENST00000600659 GUK1Q16774 197 aa11.34□□□□□ -0.59
RPS28-203ENST00000600659 LRRC20Q8TCA0 184 aa11.34□□□□□ -0.59
RPS28-203ENST00000600659 CELA1Q9UNI1 258 aa11.34□□□□□ -0.59
RPS28-203ENST00000600659 LCE6AA0A183 80 aa11.33□□□□□ -0.6
RPS28-203ENST00000600659 C17orf112F2Z3M2 114 aa11.33□□□□□ -0.6
RPS28-203ENST00000600659 M0R2Z0 102 aa11.33□□□□□ -0.6
RPS28-203ENST00000600659 HIST1H1AQ02539 215 aaPredicted RBP11.33□□□□□ -0.6
RPS28-203ENST00000600659 SPINK13Q1W4C9 94 aa11.33□□□□□ -0.6
RPS28-203ENST00000600659 MRPL32Q9BYC8 188 aaKnown RBP11.33□□□□□ -0.6
RPS28-203ENST00000600659 FUT9Q9Y231 359 aa11.33□□□□□ -0.6
RPS28-203ENST00000600659 VPS13DQ5THJ4 4388 aa11.32□□□□□ -0.6
RPS28-203ENST00000600659 CXorf65A6NEN9 183 aa11.32□□□□□ -0.6
RPS28-203ENST00000600659 M0R3E3 92 aa11.32□□□□□ -0.6
RPS28-203ENST00000600659 IFNA5P01569 189 aa11.32□□□□□ -0.6
RPS28-203ENST00000600659 FFAR4Q5NUL3 377 aa11.32□□□□□ -0.6
RPS28-203ENST00000600659 C11orf45Q8TAV5 145 aa11.32□□□□□ -0.6
RPS28-203ENST00000600659 FXYD5Q96DB9 178 aa11.32□□□□□ -0.6
RPS28-203ENST00000600659 IGF2BP2-AS1Q96M15 143 aa11.32□□□□□ -0.6
RPS28-203ENST00000600659 TNFSF18Q9UNG2 199 aa11.32□□□□□ -0.6
RPS28-203ENST00000600659 BOLA2-SMG1P6H3BVE0 249 aa11.31□□□□□ -0.6
RPS28-203ENST00000600659 EIF3GO75821 320 aaKnown RBP eCLIP11.31□□□□□ -0.64e-11■■■■■ 28
RPS28-203ENST00000600659 PDE6HQ13956 83 aa11.31□□□□□ -0.6
RPS28-203ENST00000600659 CEMP1Q6PRD7 247 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms