RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 A0A0J9YX75 114 aa11.09□□□□□ -0.63
LIG1-219ENST00000600055 A0A1B0GVG6 124 aa11.09□□□□□ -0.63
LIG1-219ENST00000600055 H3BQ15 152 aa11.09□□□□□ -0.63
LIG1-219ENST00000600055 PFDN1O60925 122 aa11.09□□□□□ -0.63
LIG1-219ENST00000600055 IGLC2P0DOY2 106 aa11.09□□□□□ -0.63
LIG1-219ENST00000600055 FXYD7P58549 80 aa11.09□□□□□ -0.63
LIG1-219ENST00000600055 FAM78BQ5VT40 261 aa11.09□□□□□ -0.63
LIG1-219ENST00000600055 EBLN2Q6P2I7 272 aa11.09□□□□□ -0.63
LIG1-219ENST00000600055 OR4B1Q8NGF8 309 aa11.09□□□□□ -0.63
LIG1-219ENST00000600055 OR11H2Q8NH07 326 aa11.09□□□□□ -0.63
LIG1-219ENST00000600055 LRRC20Q8TCA0 184 aa11.09□□□□□ -0.63
LIG1-219ENST00000600055 SCGB1C1Q8TD33 95 aa11.09□□□□□ -0.63
LIG1-219ENST00000600055 ST6GAL2Q96JF0 529 aa11.09□□□□□ -0.63
LIG1-219ENST00000600055 RARRES2Q99969 163 aa11.09□□□□□ -0.63
LIG1-219ENST00000600055 HMSDA8MTL9 139 aa11.08□□□□□ -0.64
LIG1-219ENST00000600055 C17orf112F2Z3M2 114 aa11.08□□□□□ -0.64
LIG1-219ENST00000600055 SLC17A3O00476 420 aa11.08□□□□□ -0.64
LIG1-219ENST00000600055 ZNF705DP0CH99 300 aaPredicted RBP11.08□□□□□ -0.64
LIG1-219ENST00000600055 ZNF705BP0CI00 300 aaPredicted RBP11.08□□□□□ -0.64
LIG1-219ENST00000600055 ZFAND6Q6FIF0 208 aa11.08□□□□□ -0.64
LIG1-219ENST00000600055 MIR17HGQ75NE6 70 aa11.08□□□□□ -0.64
LIG1-219ENST00000600055 ZNF738Q8NE65 137 aa11.08□□□□□ -0.64
LIG1-219ENST00000600055 HYLS1Q96M11 299 aa11.08□□□□□ -0.64
LIG1-219ENST00000600055 AQP10Q96PS8 301 aa11.08□□□□□ -0.64
LIG1-219ENST00000600055 XCL2Q9UBD3 114 aa11.08□□□□□ -0.64
LIG1-219ENST00000600055 G3V3Q6 166 aa11.07□□□□□ -0.64
LIG1-219ENST00000600055 C3orf84H3BNL1 204 aa11.07□□□□□ -0.64
LIG1-219ENST00000600055 C1QBP02746 253 aa11.07□□□□□ -0.64
LIG1-219ENST00000600055 PSG3Q16557 428 aa11.07□□□□□ -0.64
LIG1-219ENST00000600055 FFAR4Q5NUL3 377 aa11.07□□□□□ -0.64
LIG1-219ENST00000600055 LCN15Q6UWW0 184 aa11.07□□□□□ -0.64
LIG1-219ENST00000600055 CSNK1G2-AS1Q8NCQ2 148 aa11.07□□□□□ -0.64
LIG1-219ENST00000600055 SLC25A2Q9BXI2 301 aa11.07□□□□□ -0.64
LIG1-219ENST00000600055 PARD6GQ9BYG4 376 aaPredicted RBP11.07□□□□□ -0.64
LIG1-219ENST00000600055 SLC35B3Q9H1N7 401 aa11.07□□□□□ -0.64
LIG1-219ENST00000600055 HRH4Q9H3N8 390 aa11.07□□□□□ -0.64
LIG1-219ENST00000600055 ZNF331Q9NQX6 463 aaPredicted RBP11.07□□□□□ -0.64
LIG1-219ENST00000600055 KCNIP2Q9NS61 270 aa11.07□□□□□ -0.64
LIG1-219ENST00000600055 ZNF586Q9NXT0 402 aa11.07□□□□□ -0.64
LIG1-219ENST00000600055 TNFSF18Q9UNG2 199 aa11.07□□□□□ -0.64
LIG1-219ENST00000600055 A0A0D9SG52 128 aa11.06□□□□□ -0.64
LIG1-219ENST00000600055 SMLR1H3BR10 107 aa11.06□□□□□ -0.64
LIG1-219ENST00000600055 TAAR5O14804 337 aa11.06□□□□□ -0.64
LIG1-219ENST00000600055 PYYP10082 97 aa11.06□□□□□ -0.64
LIG1-219ENST00000600055 CXCL2P19875 107 aa11.06□□□□□ -0.64
LIG1-219ENST00000600055 NUTF2P61970 127 aaKnown RBP11.06□□□□□ -0.64
LIG1-219ENST00000600055 ZNF266Q14584 549 aa11.06□□□□□ -0.64
LIG1-219ENST00000600055 TMEM41BQ5BJD5 291 aa11.06□□□□□ -0.64
LIG1-219ENST00000600055 SAT2Q96F10 170 aaPredicted RBP11.06□□□□□ -0.64
LIG1-219ENST00000600055 FAM167A-AS1Q96KT0 104 aa11.06□□□□□ -0.64
LIG1-219ENST00000600055 MFFQ9GZY8 342 aa11.06□□□□□ -0.64
LIG1-219ENST00000600055 RNF222A6NCQ9 220 aa11.05□□□□□ -0.64
LIG1-219ENST00000600055 ZNF705FA8MVS1 300 aaPredicted RBP11.05□□□□□ -0.64
LIG1-219ENST00000600055 DEFB4AO15263 64 aa11.05□□□□□ -0.64
LIG1-219ENST00000600055 ARPC5O15511 151 aa11.05□□□□□ -0.64
LIG1-219ENST00000600055 CNN1P51911 297 aaKnown RBP11.05□□□□□ -0.64
LIG1-219ENST00000600055 PSG9Q00887 426 aa11.05□□□□□ -0.64
LIG1-219ENST00000600055 ZNF345Q14585 488 aa11.05□□□□□ -0.64
LIG1-219ENST00000600055 ZFP69Q49AA0 526 aa11.05□□□□□ -0.64
LIG1-219ENST00000600055 CASC10Q5T4H9 136 aa11.05□□□□□ -0.64
LIG1-219ENST00000600055 CLUHP3Q96NS8 147 aa11.05□□□□□ -0.64
LIG1-219ENST00000600055 SLC50A1Q9BRV3 221 aa11.05□□□□□ -0.64
LIG1-219ENST00000600055 TMEM14CQ9P0S9 112 aa11.05□□□□□ -0.64
LIG1-219ENST00000600055 TRBV19A0A075B6N1 114 aa11.04□□□□□ -0.64
LIG1-219ENST00000600055 BORCS7-ASMTA0A0B4J1R7 106 aa11.04□□□□□ -0.64
LIG1-219ENST00000600055 A8MTW9 85 aa11.04□□□□□ -0.64
LIG1-219ENST00000600055 EIF3GO75821 320 aaKnown RBP eCLIP11.04□□□□□ -0.64
LIG1-219ENST00000600055 HIST1H1AQ02539 215 aaPredicted RBP11.04□□□□□ -0.64
LIG1-219ENST00000600055 AMTNQ6UX39 209 aa11.04□□□□□ -0.64
LIG1-219ENST00000600055 OR8A1Q8NGG7 326 aa11.04□□□□□ -0.64
LIG1-219ENST00000600055 RPUSD4Q96CM3 377 aaKnown RBP11.04□□□□□ -0.64
LIG1-219ENST00000600055 C1QTNF4Q9BXJ3 329 aa11.04□□□□□ -0.64
LIG1-219ENST00000600055 FUT9Q9Y231 359 aa11.04□□□□□ -0.64
LIG1-219ENST00000600055 X6R8D5 127 aa11.04□□□□□ -0.64
LIG1-219ENST00000600055 ZNF705EA8MWA4 302 aaPredicted RBP11.03□□□□□ -0.64
LIG1-219ENST00000600055 PRAC2D3DTV9 90 aa11.03□□□□□ -0.64
LIG1-219ENST00000600055 DUSP14O95147 198 aaKnown RBP11.03□□□□□ -0.64
LIG1-219ENST00000600055 NDUFB4O95168 129 aa11.03□□□□□ -0.64
LIG1-219ENST00000600055 HIST1H1EP10412 219 aaKnown RBP11.03□□□□□ -0.64
LIG1-219ENST00000600055 GUK1Q16774 197 aa11.03□□□□□ -0.64
LIG1-219ENST00000600055 HSD17B11Q8NBQ5 300 aa11.03□□□□□ -0.64
LIG1-219ENST00000600055 IL17DQ8TAD2 202 aa11.03□□□□□ -0.64
LIG1-219ENST00000600055 BLNKQ8WV28 456 aa11.03□□□□□ -0.64
LIG1-219ENST00000600055 MRPL32Q9BYC8 188 aaKnown RBP11.03□□□□□ -0.64
LIG1-219ENST00000600055 IGHV4-28A0A0C4DH34 117 aa11.02□□□□□ -0.65
LIG1-219ENST00000600055 JTBO76095 146 aa11.02□□□□□ -0.65
LIG1-219ENST00000600055 OR10J4P0C629 311 aa11.02□□□□□ -0.65
LIG1-219ENST00000600055 EIF5AP63241 154 aaKnown RBP11.02□□□□□ -0.65
LIG1-219ENST00000600055 Q8NAQ8 132 aa11.02□□□□□ -0.65
LIG1-219ENST00000600055 OR51M1Q9H341 326 aa11.02□□□□□ -0.65
LIG1-219ENST00000600055 TIMM9Q9Y5J7 89 aa11.02□□□□□ -0.65
LIG1-219ENST00000600055 KANTRA0A1W2PQU2 76 aa11.01□□□□□ -0.65
LIG1-219ENST00000600055 M0R2Z0 102 aa11.01□□□□□ -0.65
LIG1-219ENST00000600055 RBMY1A1P0DJD3 496 aaKnown RBP11.01□□□□□ -0.65
LIG1-219ENST00000600055 RBMY1CP0DJD4 496 aa11.01□□□□□ -0.65
LIG1-219ENST00000600055 ATP6V0CP27449 155 aa11.01□□□□□ -0.65
LIG1-219ENST00000600055 RAB2AP61019 212 aa11.01□□□□□ -0.65
LIG1-219ENST00000600055 RBMY1FQ15415 496 aaKnown RBP11.01□□□□□ -0.65
LIG1-219ENST00000600055 SPINK13Q1W4C9 94 aa11.01□□□□□ -0.65
LIG1-219ENST00000600055 RPL7L1Q6DKI1 246 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms