RNA–Protein interactions for RNA: ENST00000599680.1

IRF3-224, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-224ENST00000599680 SPART-AS1P0CW21 52 aa10.31□□□□□ -0.76
IRF3-224ENST00000599680 RHOBP62745 196 aa10.31□□□□□ -0.76
IRF3-224ENST00000599680 HIST1H1AQ02539 215 aaPredicted RBP10.31□□□□□ -0.76
IRF3-224ENST00000599680 LCN15Q6UWW0 184 aa10.31□□□□□ -0.76
IRF3-224ENST00000599680 ZNF767PQ75MW2 155 aa10.31□□□□□ -0.76
IRF3-224ENST00000599680 OR1L4Q8NGR5 311 aa10.31□□□□□ -0.76
IRF3-224ENST00000599680 IGF2BP2-AS1Q96M15 143 aa10.31□□□□□ -0.76
IRF3-224ENST00000599680 C11orf1Q9H5F2 150 aa10.31□□□□□ -0.76
IRF3-224ENST00000599680 DEFB131BA0A096LNP1 70 aa10.3□□□□□ -0.76
IRF3-224ENST00000599680 IGSF23A1L1A6 192 aa10.3□□□□□ -0.76
IRF3-224ENST00000599680 CXCL2P19875 107 aa10.3□□□□□ -0.76
IRF3-224ENST00000599680 CXCL3P19876 107 aa10.3□□□□□ -0.76
IRF3-224ENST00000599680 DEFA1P59665 94 aa10.3□□□□□ -0.76
IRF3-224ENST00000599680 DEFA3P59666 94 aa10.3□□□□□ -0.76
IRF3-224ENST00000599680 PSG3Q16557 428 aa10.3□□□□□ -0.76
IRF3-224ENST00000599680 ATP6V1FQ16864 119 aa10.3□□□□□ -0.76
IRF3-224ENST00000599680 SPINK13Q1W4C9 94 aa10.3□□□□□ -0.76
IRF3-224ENST00000599680 RRN3P1Q2M238 152 aa10.3□□□□□ -0.76
IRF3-224ENST00000599680 C12orf74Q32Q52 190 aa10.3□□□□□ -0.76
IRF3-224ENST00000599680 MIC13Q5XKP0 118 aa10.3□□□□□ -0.76
IRF3-224ENST00000599680 TMEM252Q8N6L7 170 aa10.3□□□□□ -0.76
IRF3-224ENST00000599680 OR11H7Q8NGC8 314 aa10.3□□□□□ -0.76
IRF3-224ENST00000599680 PFDN5Q99471 154 aa10.3□□□□□ -0.76
IRF3-224ENST00000599680 SLC50A1Q9BRV3 221 aa10.3□□□□□ -0.76
IRF3-224ENST00000599680 DNAJC4Q9NNZ3 241 aa10.3□□□□□ -0.76
IRF3-224ENST00000599680 IGHV4-4A0A075B6R2 117 aa10.29□□□□□ -0.76
IRF3-224ENST00000599680 LOC102723971A0A1B0GUV8 181 aa10.29□□□□□ -0.76
IRF3-224ENST00000599680 A8MTW9 85 aa10.29□□□□□ -0.76
IRF3-224ENST00000599680 INMT-MINDY4F8WBC2 141 aa10.29□□□□□ -0.76
IRF3-224ENST00000599680 M0R2Z0 102 aa10.29□□□□□ -0.76
IRF3-224ENST00000599680 SIX6O95475 246 aa10.29□□□□□ -0.76
IRF3-224ENST00000599680 FGF7P21781 194 aa10.29□□□□□ -0.76
IRF3-224ENST00000599680 AMTNQ6UX39 209 aa10.29□□□□□ -0.76
IRF3-224ENST00000599680 C1orf158Q8N1D5 194 aa10.29□□□□□ -0.76
IRF3-224ENST00000599680 RPUSD4Q96CM3 377 aaKnown RBP10.29□□□□□ -0.76
IRF3-224ENST00000599680 APLNQ9ULZ1 77 aa10.29□□□□□ -0.76
IRF3-224ENST00000599680 WDR83OSQ9Y284 106 aa10.29□□□□□ -0.76
IRF3-224ENST00000599680 BOLA2-SMG1P6H3BVE0 249 aa10.28□□□□□ -0.76
IRF3-224ENST00000599680 SNRPCP09234 159 aaKnown RBP10.28□□□□□ -0.76
IRF3-224ENST00000599680 CYCSP99999 105 aaKnown RBP10.28□□□□□ -0.76
IRF3-224ENST00000599680 IL15RAQ13261 267 aa10.28□□□□□ -0.76
IRF3-224ENST00000599680 OPCMLQ14982 345 aa10.28□□□□□ -0.76
IRF3-224ENST00000599680 VWC2Q2TAL6 325 aa10.28□□□□□ -0.76
IRF3-224ENST00000599680 OR8A1Q8NGG7 326 aa10.28□□□□□ -0.76
IRF3-224ENST00000599680 TMEM37Q8WXS4 190 aa10.28□□□□□ -0.76
IRF3-224ENST00000599680 RNF126Q9BV68 326 aa10.28□□□□□ -0.76
IRF3-224ENST00000599680 SLC25A31Q9H0C2 315 aa10.28□□□□□ -0.76
IRF3-224ENST00000599680 SLC39A9Q9NUM3 307 aa10.28□□□□□ -0.76
IRF3-224ENST00000599680 PXMP4Q9Y6I8 212 aa10.28□□□□□ -0.76
IRF3-224ENST00000599680 E5RGE8 158 aa10.27□□□□□ -0.77
IRF3-224ENST00000599680 MRPS12O15235 138 aaKnown RBP10.27□□□□□ -0.77
IRF3-224ENST00000599680 SSNA1O43805 119 aa10.27□□□□□ -0.77
IRF3-224ENST00000599680 RPL29P47914 159 aaKnown RBP10.27□□□□□ -0.77
IRF3-224ENST00000599680 B2MP61769 119 aa10.27□□□□□ -0.77
IRF3-224ENST00000599680 PRR20EP86478 221 aa10.27□□□□□ -0.77
IRF3-224ENST00000599680 PRR20CP86479 221 aa10.27□□□□□ -0.77
IRF3-224ENST00000599680 PRR20DP86480 221 aa10.27□□□□□ -0.77
IRF3-224ENST00000599680 PRR20BP86481 221 aa10.27□□□□□ -0.77
IRF3-224ENST00000599680 PRR20AP86496 221 aa10.27□□□□□ -0.77
IRF3-224ENST00000599680 IFITM3Q01628 133 aa10.27□□□□□ -0.77
IRF3-224ENST00000599680 LRRC37A5PQ49AS3 106 aa10.27□□□□□ -0.77
IRF3-224ENST00000599680 FAM222AQ5U5X8 452 aa10.27□□□□□ -0.77
IRF3-224ENST00000599680 BAP18Q8IXM2 172 aa10.27□□□□□ -0.77
IRF3-224ENST00000599680 RPP25LQ8N5L8 163 aaKnown RBP10.27□□□□□ -0.77
IRF3-224ENST00000599680 NIPSNAP3BQ9BS92 247 aa10.27□□□□□ -0.77
IRF3-224ENST00000599680 NMES1Q9C002 83 aa10.27□□□□□ -0.77
IRF3-224ENST00000599680 ZNF331Q9NQX6 463 aaPredicted RBP10.27□□□□□ -0.77
IRF3-224ENST00000599680 BATF3Q9NR55 127 aa10.27□□□□□ -0.77
IRF3-224ENST00000599680 HYDINQ4G0P3 5121 aa10.27□□□□□ -0.77
IRF3-224ENST00000599680 H3BTX0 84 aa10.26□□□□□ -0.77
IRF3-224ENST00000599680 MPDU1O75352 247 aa10.26□□□□□ -0.77
IRF3-224ENST00000599680 GUK1Q16774 197 aa10.26□□□□□ -0.77
IRF3-224ENST00000599680 MORN5Q5VZ52 161 aa10.26□□□□□ -0.77
IRF3-224ENST00000599680 OR10J6PQ8NGY7 276 aa10.26□□□□□ -0.77
IRF3-224ENST00000599680 NDUFAF3Q9BU61 184 aa10.26□□□□□ -0.77
IRF3-224ENST00000599680 DKK2Q9UBU2 259 aa10.26□□□□□ -0.77
IRF3-224ENST00000599680 YTHDF2Q9Y5A9 579 aaKnown RBP10.26□□□□□ -0.77
IRF3-224ENST00000599680 TRAV12-2A0A075B6T6 113 aa10.25□□□□□ -0.77
IRF3-224ENST00000599680 PRB4P10163 310 aaPredicted RBP10.25□□□□□ -0.77
IRF3-224ENST00000599680 HTN3P15516 51 aa10.25□□□□□ -0.77
IRF3-224ENST00000599680 DAD1P61803 113 aa10.25□□□□□ -0.77
IRF3-224ENST00000599680 NHLH2Q02577 135 aa10.25□□□□□ -0.77
IRF3-224ENST00000599680 OR5C1Q8NGR4 320 aa10.25□□□□□ -0.77
IRF3-224ENST00000599680 TRAV5A0A0B4J249 113 aa10.24□□□□□ -0.77
IRF3-224ENST00000599680 ZNF705GA8MUZ8 300 aaPredicted RBP10.24□□□□□ -0.77
IRF3-224ENST00000599680 SLC17A3O00476 420 aa10.24□□□□□ -0.77
IRF3-224ENST00000599680 CRXO43186 299 aaPredicted RBP10.24□□□□□ -0.77
IRF3-224ENST00000599680 PET100P0DJ07 73 aa10.24□□□□□ -0.77
IRF3-224ENST00000599680 IGLC2P0DOY2 106 aa10.24□□□□□ -0.77
IRF3-224ENST00000599680 TMEM256Q8N2U0 113 aa10.24□□□□□ -0.77
IRF3-224ENST00000599680 LINC01587Q99440 93 aa10.24□□□□□ -0.77
IRF3-224ENST00000599680 MARVELD1Q9BSK0 173 aa10.24□□□□□ -0.77
IRF3-224ENST00000599680 OR5AC2Q9NZP5 309 aa10.24□□□□□ -0.77
IRF3-224ENST00000599680 H3BQ15 152 aa10.23□□□□□ -0.77
IRF3-224ENST00000599680 HTN1P15515 57 aa10.23□□□□□ -0.77
IRF3-224ENST00000599680 TSPOP30536 169 aa10.23□□□□□ -0.77
IRF3-224ENST00000599680 CDKN1BP46527 198 aa10.23□□□□□ -0.77
IRF3-224ENST00000599680 CLINT1Q14677 625 aa10.23□□□□□ -0.77
IRF3-224ENST00000599680 THAP6Q8TBB0 222 aa10.23□□□□□ -0.77
IRF3-224ENST00000599680 CHAC2Q8WUX2 184 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms