RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 C11orf52Q96A22 123 aa17.76■□□□□ 0.43
SYMPK-212ENST00000598896 NKX6-2Q9C056 277 aaPredicted RBP17.76■□□□□ 0.43
SYMPK-212ENST00000598896 UFC1Q9Y3C8 167 aa17.76■□□□□ 0.43
SYMPK-212ENST00000598896 TSSC4Q9Y5U2 329 aaPredicted RBP17.76■□□□□ 0.43
SYMPK-212ENST00000598896 PGPA6NDG6 321 aa17.75■□□□□ 0.43
SYMPK-212ENST00000598896 A8MWP6 167 aa17.75■□□□□ 0.43
SYMPK-212ENST00000598896 LGALS9O00182 355 aa17.75■□□□□ 0.43
SYMPK-212ENST00000598896 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.75■□□□□ 0.43
SYMPK-212ENST00000598896 GPR82Q96P67 336 aa17.75■□□□□ 0.43
SYMPK-212ENST00000598896 JMJD1CQ15652 2540 aa17.75■□□□□ 0.43
SYMPK-212ENST00000598896 ZNF674Q2M3X9 581 aa17.75■□□□□ 0.43
SYMPK-212ENST00000598896 C1QL4Q86Z23 238 aa17.75■□□□□ 0.43
SYMPK-212ENST00000598896 RHPN1-AS1Q9BWJ2 59 aa17.75■□□□□ 0.43
SYMPK-212ENST00000598896 SMPXQ9UHP9 88 aa17.75■□□□□ 0.43
SYMPK-212ENST00000598896 ATF4P18848 351 aaPredicted RBP17.74■□□□□ 0.43
SYMPK-212ENST00000598896 PDE6HQ13956 83 aa17.74■□□□□ 0.43
SYMPK-212ENST00000598896 RAX2Q96IS3 184 aa17.74■□□□□ 0.43
SYMPK-212ENST00000598896 A0A087X0K7 114 aa17.73■□□□□ 0.43
SYMPK-212ENST00000598896 CHEK1O14757 476 aa17.73■□□□□ 0.43
SYMPK-212ENST00000598896 GALR1P47211 349 aa17.73■□□□□ 0.43
SYMPK-212ENST00000598896 GNG5P63218 68 aa17.73■□□□□ 0.43
SYMPK-212ENST00000598896 DPF1Q92782 380 aa17.73■□□□□ 0.43
SYMPK-212ENST00000598896 SELENOKQ9Y6D0 94 aa17.73■□□□□ 0.43
SYMPK-212ENST00000598896 ZNF727A8MUV8 499 aa17.73■□□□□ 0.43
SYMPK-212ENST00000598896 ATRAIDQ6UW56 229 aa17.73■□□□□ 0.43
SYMPK-212ENST00000598896 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.73■□□□□ 0.43
SYMPK-212ENST00000598896 SMIM7Q9BQ49 75 aa17.73■□□□□ 0.43
SYMPK-212ENST00000598896 OTORQ9NRC9 128 aa17.73■□□□□ 0.43
SYMPK-212ENST00000598896 A0A1W2PS18 150 aa17.72■□□□□ 0.43
SYMPK-212ENST00000598896 ZNF785A8K8V0 405 aa17.72■□□□□ 0.43
SYMPK-212ENST00000598896 ADARB2-AS1A8MUL3 147 aa17.72■□□□□ 0.43
SYMPK-212ENST00000598896 SVBPQ8N300 66 aa17.72■□□□□ 0.43
SYMPK-212ENST00000598896 C2CD4CQ8TF44 421 aa17.72■□□□□ 0.43
SYMPK-212ENST00000598896 SLC25A5P05141 298 aaKnown RBP17.71■□□□□ 0.43
SYMPK-212ENST00000598896 FHL3Q13643 280 aa17.71■□□□□ 0.43
SYMPK-212ENST00000598896 TRBV20OR9-2A0A075B6H5 130 aa17.71■□□□□ 0.43
SYMPK-212ENST00000598896 IGFL4Q6B9Z1 124 aa17.71■□□□□ 0.43
SYMPK-212ENST00000598896 LYPD1Q8N2G4 141 aa17.71■□□□□ 0.43
SYMPK-212ENST00000598896 C5orf17Q8NAS9 161 aa17.71■□□□□ 0.43
SYMPK-212ENST00000598896 DLX4Q92988 240 aaPredicted RBP17.71■□□□□ 0.43
SYMPK-212ENST00000598896 GRAMD2BQ96HH9 432 aa17.71■□□□□ 0.43
SYMPK-212ENST00000598896 NIPSNAP3BQ9BS92 247 aa17.71■□□□□ 0.43
SYMPK-212ENST00000598896 EPDR1Q9UM22 224 aa17.71■□□□□ 0.43
SYMPK-212ENST00000598896 PRB4P10163 310 aaPredicted RBP17.7■□□□□ 0.42
SYMPK-212ENST00000598896 A0A1B0GUS0 222 aa17.69■□□□□ 0.42
SYMPK-212ENST00000598896 C2orf70A6NJV1 201 aa17.69■□□□□ 0.42
SYMPK-212ENST00000598896 M0R3E3 92 aa17.69■□□□□ 0.42
SYMPK-212ENST00000598896 PEX7O00628 323 aa17.69■□□□□ 0.42
SYMPK-212ENST00000598896 RPL35P42766 123 aaKnown RBP17.69■□□□□ 0.42
SYMPK-212ENST00000598896 LINC00479Q96M42 142 aa17.69■□□□□ 0.42
SYMPK-212ENST00000598896 ZNF331Q9NQX6 463 aaPredicted RBP17.69■□□□□ 0.42
SYMPK-212ENST00000598896 RPH3ALQ9UNE2 315 aa17.69■□□□□ 0.42
SYMPK-212ENST00000598896 CCL24O00175 119 aa17.69■□□□□ 0.42
SYMPK-212ENST00000598896 ZNF253O75346 499 aa17.69■□□□□ 0.42
SYMPK-212ENST00000598896 SCO1O75880 301 aa17.69■□□□□ 0.42
SYMPK-212ENST00000598896 CBLN1P23435 193 aa17.69■□□□□ 0.42
SYMPK-212ENST00000598896 ADAMTSL5Q6ZMM2 481 aa17.69■□□□□ 0.42
SYMPK-212ENST00000598896 TCEAL7Q9BRU2 100 aa17.69■□□□□ 0.42
SYMPK-212ENST00000598896 HLA-DMBP28068 263 aa17.68■□□□□ 0.42
SYMPK-212ENST00000598896 FAM74A3Q4VXF1 159 aa17.68■□□□□ 0.42
SYMPK-212ENST00000598896 TCRAP04437 139 aa17.67■□□□□ 0.42
SYMPK-212ENST00000598896 PSG9Q00887 426 aa17.67■□□□□ 0.42
SYMPK-212ENST00000598896 CLRN3Q8NCR9 226 aa17.67■□□□□ 0.42
SYMPK-212ENST00000598896 HIST1H2BAQ96A08 127 aa17.67■□□□□ 0.42
SYMPK-212ENST00000598896 AAMDCQ9H7C9 122 aa17.67■□□□□ 0.42
SYMPK-212ENST00000598896 PGPEP1LA6NFU8 196 aa17.67■□□□□ 0.42
SYMPK-212ENST00000598896 AWAT1Q58HT5 328 aa17.67■□□□□ 0.42
SYMPK-212ENST00000598896 OR9G4Q8NGQ1 327 aa17.67■□□□□ 0.42
SYMPK-212ENST00000598896 ATG101Q9BSB4 218 aa17.67■□□□□ 0.42
SYMPK-212ENST00000598896 SDF2L1Q9HCN8 221 aa17.67■□□□□ 0.42
SYMPK-212ENST00000598896 SNAPINO95295 136 aa17.66■□□□□ 0.42
SYMPK-212ENST00000598896 FOLR2P14207 255 aa17.66■□□□□ 0.42
SYMPK-212ENST00000598896 FOXL1Q12952 345 aa17.66■□□□□ 0.42
SYMPK-212ENST00000598896 NSUN5P1Q3KNT7 163 aa17.66■□□□□ 0.42
SYMPK-212ENST00000598896 CMTM2Q8TAZ6 248 aa17.66■□□□□ 0.42
SYMPK-212ENST00000598896 NAT8Q9UHE5 227 aa17.66■□□□□ 0.42
SYMPK-212ENST00000598896 TRAV8-2A0A0B4J237 113 aa17.65■□□□□ 0.42
SYMPK-212ENST00000598896 TRAV34A0A0B4J273 112 aa17.65■□□□□ 0.42
SYMPK-212ENST00000598896 HELTA6NFD8 242 aa17.65■□□□□ 0.42
SYMPK-212ENST00000598896 AKR1C3P42330 323 aa17.65■□□□□ 0.42
SYMPK-212ENST00000598896 TMEM241Q24JQ0 296 aa17.65■□□□□ 0.42
SYMPK-212ENST00000598896 RNF182Q8N6D2 247 aa17.65■□□□□ 0.42
SYMPK-212ENST00000598896 TVP23CQ96ET8 276 aa17.65■□□□□ 0.42
SYMPK-212ENST00000598896 IGKV3-7A0A075B6H7 116 aa17.65■□□□□ 0.42
SYMPK-212ENST00000598896 M0R036 132 aa17.65■□□□□ 0.42
SYMPK-212ENST00000598896 RPL11P62913 178 aaKnown RBP17.65■□□□□ 0.42
SYMPK-212ENST00000598896 TCF24Q7RTU0 167 aa17.65■□□□□ 0.42
SYMPK-212ENST00000598896 SLC50A1Q9BRV3 221 aa17.65■□□□□ 0.42
SYMPK-212ENST00000598896 MLXQ9UH92 298 aa17.65■□□□□ 0.42
SYMPK-212ENST00000598896 ISLRO14498 428 aa17.64■□□□□ 0.41
SYMPK-212ENST00000598896 MEOX2P50222 304 aa17.64■□□□□ 0.41
SYMPK-212ENST00000598896 SGK494Q96LW2 274 aa17.64■□□□□ 0.41
SYMPK-212ENST00000598896 NRN1Q9NPD7 142 aa17.64■□□□□ 0.41
SYMPK-212ENST00000598896 AURKAIP1Q9NWT8 199 aaPredicted RBP17.64■□□□□ 0.41
SYMPK-212ENST00000598896 SOCS3O14543 225 aa17.63■□□□□ 0.41
SYMPK-212ENST00000598896 NDUFA11Q86Y39 141 aa17.63■□□□□ 0.41
SYMPK-212ENST00000598896 PEMTQ9UBM1 199 aa17.63■□□□□ 0.41
SYMPK-212ENST00000598896 TENM1Q9UKZ4 2725 aa17.63■□□□□ 0.41
SYMPK-212ENST00000598896 BMI1P35226 326 aa17.63■□□□□ 0.41
SYMPK-212ENST00000598896 CNN1P51911 297 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms