RNA–Protein interactions for RNA: ENST00000597995.1

TRIM28-212, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-212ENST00000597995 FAM25EA8MYX2 175 aa8.85□□□□□ -0.99
TRIM28-212ENST00000597995 MRPS12O15235 138 aaKnown RBP8.85□□□□□ -0.99
TRIM28-212ENST00000597995 HYPMO75409 117 aa8.85□□□□□ -0.99
TRIM28-212ENST00000597995 HTN3P15516 51 aa8.85□□□□□ -0.99
TRIM28-212ENST00000597995 MEOX2P50222 304 aa8.85□□□□□ -0.99
TRIM28-212ENST00000597995 SELENOTP62341 195 aa8.85□□□□□ -0.99
TRIM28-212ENST00000597995 ASAH1Q13510 395 aa8.85□□□□□ -0.99
TRIM28-212ENST00000597995 RRN3P1Q2M238 152 aa8.85□□□□□ -0.99
TRIM28-212ENST00000597995 TEPPQ6URK8 271 aa8.85□□□□□ -0.99
TRIM28-212ENST00000597995 AMTNQ6UX39 209 aa8.85□□□□□ -0.99
TRIM28-212ENST00000597995 C2orf50Q96LR7 162 aa8.85□□□□□ -0.99
TRIM28-212ENST00000597995 GPR82Q96P67 336 aa8.85□□□□□ -0.99
TRIM28-212ENST00000597995 MGST2Q99735 147 aa8.85□□□□□ -0.99
TRIM28-212ENST00000597995 KRTAP4-5Q9BYR2 181 aa8.85□□□□□ -0.99
TRIM28-212ENST00000597995 ARL6Q9H0F7 186 aa8.85□□□□□ -0.99
TRIM28-212ENST00000597995 LSM5Q9Y4Y9 91 aaKnown RBP8.85□□□□□ -0.99
TRIM28-212ENST00000597995 C5orf51A6NDU8 294 aa8.84□□□□□ -0.99
TRIM28-212ENST00000597995 FAM24AA6NFZ4 105 aa8.84□□□□□ -0.99
TRIM28-212ENST00000597995 AGPAT2O15120 278 aa8.84□□□□□ -0.99
TRIM28-212ENST00000597995 OR5G3P0C626 314 aa8.84□□□□□ -0.99
TRIM28-212ENST00000597995 RAP2BP61225 183 aa8.84□□□□□ -0.99
TRIM28-212ENST00000597995 DAD1P61803 113 aa8.84□□□□□ -0.99
TRIM28-212ENST00000597995 ZNF846Q147U1 533 aa8.84□□□□□ -0.99
TRIM28-212ENST00000597995 TMEM88Q6PEY1 159 aa8.84□□□□□ -0.99
TRIM28-212ENST00000597995 RNF182Q8N6D2 247 aa8.84□□□□□ -0.99
TRIM28-212ENST00000597995 S100ZQ8WXG8 99 aa8.84□□□□□ -0.99
TRIM28-212ENST00000597995 GGACTQ9BVM4 153 aa8.84□□□□□ -0.99
TRIM28-212ENST00000597995 ARV1Q9H2C2 271 aa8.84□□□□□ -0.99
TRIM28-212ENST00000597995 RPRMQ9NS64 109 aa8.84□□□□□ -0.99
TRIM28-212ENST00000597995 MGAT4CQ9UBM8 478 aa8.84□□□□□ -0.99
TRIM28-212ENST00000597995 ABCA13Q86UQ4 5058 aa8.83□□□□□ -1
TRIM28-212ENST00000597995 L7N2F9 121 aa8.83□□□□□ -1
TRIM28-212ENST00000597995 UPK1BO75841 260 aa8.83□□□□□ -1
TRIM28-212ENST00000597995 CST7O76096 145 aa8.83□□□□□ -1
TRIM28-212ENST00000597995 PRB4P10163 310 aaPredicted RBP8.83□□□□□ -1
TRIM28-212ENST00000597995 VAMP2P63027 116 aa8.83□□□□□ -1
TRIM28-212ENST00000597995 FGL1Q08830 312 aa8.83□□□□□ -1
TRIM28-212ENST00000597995 RAB32Q13637 225 aa8.83□□□□□ -1
TRIM28-212ENST00000597995 MORN5Q5VZ52 161 aa8.83□□□□□ -1
TRIM28-212ENST00000597995 TMEM37Q8WXS4 190 aa8.83□□□□□ -1
TRIM28-212ENST00000597995 IGF2BP2-AS1Q96M15 143 aa8.83□□□□□ -1
TRIM28-212ENST00000597995 HSPG2P98160 4391 aa8.82□□□□□ -1
TRIM28-212ENST00000597995 A0A087X0K7 114 aa8.82□□□□□ -1
TRIM28-212ENST00000597995 IGSF23A1L1A6 192 aa8.82□□□□□ -1
TRIM28-212ENST00000597995 GOSR2O14653 212 aa8.82□□□□□ -1
TRIM28-212ENST00000597995 CRXO43186 299 aaPredicted RBP8.82□□□□□ -1
TRIM28-212ENST00000597995 CDK2AP2O75956 126 aa8.82□□□□□ -1
TRIM28-212ENST00000597995 RPL7P18124 248 aaKnown RBP8.82□□□□□ -1
TRIM28-212ENST00000597995 CXCL3P19876 107 aa8.82□□□□□ -1
TRIM28-212ENST00000597995 BCAP31P51572 246 aa8.82□□□□□ -1
TRIM28-212ENST00000597995 CNN1P51911 297 aaKnown RBP8.82□□□□□ -1
TRIM28-212ENST00000597995 MZT2BQ6NZ67 158 aa8.82□□□□□ -1
TRIM28-212ENST00000597995 S100A7AQ86SG5 101 aa8.82□□□□□ -1
TRIM28-212ENST00000597995 ZNF546Q86UE3 836 aa8.82□□□□□ -1
TRIM28-212ENST00000597995 LYRM9A8MSI8 78 aa8.81□□□□□ -1
TRIM28-212ENST00000597995 C16orf90A8MZG2 172 aa8.81□□□□□ -1
TRIM28-212ENST00000597995 PRM2P04554 102 aa8.81□□□□□ -1
TRIM28-212ENST00000597995 SNRPCP09234 159 aaKnown RBP8.81□□□□□ -1
TRIM28-212ENST00000597995 CAV2P51636 162 aa8.81□□□□□ -1
TRIM28-212ENST00000597995 B2MP61769 119 aa8.81□□□□□ -1
TRIM28-212ENST00000597995 VWC2Q2TAL6 325 aa8.81□□□□□ -1
TRIM28-212ENST00000597995 LINC00305Q7Z4B0 112 aa8.81□□□□□ -1
TRIM28-212ENST00000597995 TMEM252Q8N6L7 170 aa8.81□□□□□ -1
TRIM28-212ENST00000597995 OR11H7Q8NGC8 314 aa8.81□□□□□ -1
TRIM28-212ENST00000597995 ATG101Q9BSB4 218 aa8.81□□□□□ -1
TRIM28-212ENST00000597995 TMEM208Q9BTX3 173 aa8.81□□□□□ -1
TRIM28-212ENST00000597995 LYRM2Q9NU23 88 aaPredicted RBP8.81□□□□□ -1
TRIM28-212ENST00000597995 PTTG2Q9NZH5 202 aa8.81□□□□□ -1
TRIM28-212ENST00000597995 RNF24Q9Y225 148 aa8.81□□□□□ -1
TRIM28-212ENST00000597995 WDR83OSQ9Y284 106 aa8.81□□□□□ -1
TRIM28-212ENST00000597995 SIX6O95475 246 aa8.8□□□□□ -1
TRIM28-212ENST00000597995 TSPOP30536 169 aa8.8□□□□□ -1
TRIM28-212ENST00000597995 CAMLGP49069 296 aa8.8□□□□□ -1
TRIM28-212ENST00000597995 S100A10P60903 97 aa8.8□□□□□ -1
TRIM28-212ENST00000597995 TNP2Q05952 138 aa8.8□□□□□ -1
TRIM28-212ENST00000597995 PSG3Q16557 428 aa8.8□□□□□ -1
TRIM28-212ENST00000597995 SPINK13Q1W4C9 94 aa8.8□□□□□ -1
TRIM28-212ENST00000597995 PXDC1Q5TGL8 231 aa8.8□□□□□ -1
TRIM28-212ENST00000597995 MIC13Q5XKP0 118 aa8.8□□□□□ -1
TRIM28-212ENST00000597995 NRARPQ7Z6K4 114 aa8.8□□□□□ -1
TRIM28-212ENST00000597995 TRAV5A0A0B4J249 113 aa8.79□□□□□ -1
TRIM28-212ENST00000597995 NBDYA0A0U1RRE5 68 aa8.79□□□□□ -1
TRIM28-212ENST00000597995 M0R2Z0 102 aa8.79□□□□□ -1
TRIM28-212ENST00000597995 DUSP14O95147 198 aaKnown RBP8.79□□□□□ -1
TRIM28-212ENST00000597995 SULT1A1P50225 295 aa8.79□□□□□ -1
TRIM28-212ENST00000597995 OPCMLQ14982 345 aa8.79□□□□□ -1
TRIM28-212ENST00000597995 C6orf223Q8N319 242 aa8.79□□□□□ -1
TRIM28-212ENST00000597995 ZNF738Q8NE65 137 aa8.79□□□□□ -1
TRIM28-212ENST00000597995 ZNRF2Q8NHG8 242 aa8.79□□□□□ -1
TRIM28-212ENST00000597995 ZNF331Q9NQX6 463 aaPredicted RBP8.79□□□□□ -1
TRIM28-212ENST00000597995 UQCC1Q9NVA1 299 aa8.79□□□□□ -1
TRIM28-212ENST00000597995 ZNF705GA8MUZ8 300 aaPredicted RBP8.78□□□□□ -1
TRIM28-212ENST00000597995 H0YIZ8 118 aa8.78□□□□□ -1
TRIM28-212ENST00000597995 H3BQ15 152 aa8.78□□□□□ -1
TRIM28-212ENST00000597995 H3BTX0 84 aa8.78□□□□□ -1
TRIM28-212ENST00000597995 SLC17A3O00476 420 aa8.78□□□□□ -1
TRIM28-212ENST00000597995 COX7A2P2O60397 106 aa8.78□□□□□ -1
TRIM28-212ENST00000597995 INSP01308 110 aa8.78□□□□□ -1
TRIM28-212ENST00000597995 IGLC2P0DOY2 106 aa8.78□□□□□ -1
TRIM28-212ENST00000597995 PVALBP20472 110 aaPredicted RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms