RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 S100A7AQ86SG5 101 aa10.95□□□□□ -0.66
TGFB1-202ENST00000597453 OR8I2Q8N0Y5 310 aa10.95□□□□□ -0.66
TGFB1-202ENST00000597453 RNF126Q9BV68 326 aa10.95□□□□□ -0.66
TGFB1-202ENST00000597453 SEPSECSQ9HD40 501 aaKnown RBP10.95□□□□□ -0.66
TGFB1-202ENST00000597453 DOK5Q9P104 306 aa10.95□□□□□ -0.66
TGFB1-202ENST00000597453 HIGD1AQ9Y241 93 aa10.95□□□□□ -0.66
TGFB1-202ENST00000597453 FAT2Q9NYQ8 4349 aa10.94□□□□□ -0.66
TGFB1-202ENST00000597453 C11orf94C9JXX5 98 aa10.94□□□□□ -0.66
TGFB1-202ENST00000597453 CAMLGP49069 296 aa10.94□□□□□ -0.66
TGFB1-202ENST00000597453 TCTAP57738 103 aa10.94□□□□□ -0.66
TGFB1-202ENST00000597453 NHLH2Q02577 135 aa10.94□□□□□ -0.66
TGFB1-202ENST00000597453 GPR82Q96P67 336 aa10.94□□□□□ -0.66
TGFB1-202ENST00000597453 SHANK2-AS3Q9BTD1 123 aa10.94□□□□□ -0.66
TGFB1-202ENST00000597453 SCRT1Q9BWW7 348 aa10.94□□□□□ -0.66
TGFB1-202ENST00000597453 SLC25A39Q9BZJ4 359 aaPredicted RBP10.94□□□□□ -0.66
TGFB1-202ENST00000597453 ARL6Q9H0F7 186 aa10.94□□□□□ -0.66
TGFB1-202ENST00000597453 SLC25A32Q9H2D1 315 aa10.94□□□□□ -0.66
TGFB1-202ENST00000597453 SLC25A22Q9H936 323 aa10.94□□□□□ -0.66
TGFB1-202ENST00000597453 DNAH17Q9UFH2 4485 aa10.93□□□□□ -0.66
TGFB1-202ENST00000597453 MPDU1O75352 247 aa10.93□□□□□ -0.66
TGFB1-202ENST00000597453 OR5G3P0C626 314 aa10.93□□□□□ -0.66
TGFB1-202ENST00000597453 GALR1P47211 349 aa10.93□□□□□ -0.66
TGFB1-202ENST00000597453 SNRPD3P62318 126 aaKnown RBP10.93□□□□□ -0.66
TGFB1-202ENST00000597453 OPCMLQ14982 345 aa10.93□□□□□ -0.66
TGFB1-202ENST00000597453 OR5C1Q8NGR4 320 aa10.93□□□□□ -0.66
TGFB1-202ENST00000597453 MED9Q9NWA0 146 aa10.93□□□□□ -0.66
TGFB1-202ENST00000597453 MBD2Q9UBB5 411 aa10.93□□□□□ -0.66
TGFB1-202ENST00000597453 CELA1Q9UNI1 258 aa10.93□□□□□ -0.66
TGFB1-202ENST00000597453 RNF24Q9Y225 148 aa10.93□□□□□ -0.66
TGFB1-202ENST00000597453 H3BMM0 161 aa10.92□□□□□ -0.66
TGFB1-202ENST00000597453 SOCS3O14543 225 aa10.92□□□□□ -0.66
TGFB1-202ENST00000597453 MEOX2P50222 304 aa10.92□□□□□ -0.66
TGFB1-202ENST00000597453 DEFB1P60022 68 aa10.92□□□□□ -0.66
TGFB1-202ENST00000597453 SAMD13Q5VXD3 122 aa10.92□□□□□ -0.66
TGFB1-202ENST00000597453 PATE2Q6UY27 113 aa10.92□□□□□ -0.66
TGFB1-202ENST00000597453 UHRF2Q96PU4 802 aa10.92□□□□□ -0.66
TGFB1-202ENST00000597453 ARV1Q9H2C2 271 aa10.92□□□□□ -0.66
TGFB1-202ENST00000597453 XCL2Q9UBD3 114 aa10.92□□□□□ -0.66
TGFB1-202ENST00000597453 TRAV10A0A0B4J240 114 aa10.91□□□□□ -0.66
TGFB1-202ENST00000597453 COX7A2P2O60397 106 aa10.91□□□□□ -0.66
TGFB1-202ENST00000597453 HLA-DRB4P13762 266 aa10.91□□□□□ -0.66
TGFB1-202ENST00000597453 FGF7P21781 194 aa10.91□□□□□ -0.66
TGFB1-202ENST00000597453 RPL29P47914 159 aaKnown RBP10.91□□□□□ -0.66
TGFB1-202ENST00000597453 PSMB3P49720 205 aa10.91□□□□□ -0.66
TGFB1-202ENST00000597453 RAB14P61106 215 aa10.91□□□□□ -0.66
TGFB1-202ENST00000597453 FGL1Q08830 312 aa10.91□□□□□ -0.66
TGFB1-202ENST00000597453 GDF5OSQ5U4N7 250 aa10.91□□□□□ -0.66
TGFB1-202ENST00000597453 HLA-DRB4X5D2U9 266 aa10.91□□□□□ -0.66
TGFB1-202ENST00000597453 IGHV4-4A0A075B6R2 117 aa10.9□□□□□ -0.66
TGFB1-202ENST00000597453 ISLRO14498 428 aa10.9□□□□□ -0.66
TGFB1-202ENST00000597453 RPL7P18124 248 aaKnown RBP10.9□□□□□ -0.66
TGFB1-202ENST00000597453 RPL12P30050 165 aaKnown RBP10.9□□□□□ -0.66
TGFB1-202ENST00000597453 ID1P41134 155 aa10.9□□□□□ -0.66
TGFB1-202ENST00000597453 CLINT1Q14677 625 aa10.9□□□□□ -0.66
TGFB1-202ENST00000597453 C12orf74Q32Q52 190 aa10.9□□□□□ -0.66
TGFB1-202ENST00000597453 MIC13Q5XKP0 118 aa10.9□□□□□ -0.66
TGFB1-202ENST00000597453 Q6ZRG5 221 aa10.9□□□□□ -0.66
TGFB1-202ENST00000597453 THAP6Q8TBB0 222 aa10.9□□□□□ -0.66
TGFB1-202ENST00000597453 TMEM37Q8WXS4 190 aa10.9□□□□□ -0.66
TGFB1-202ENST00000597453 NPCDR1Q9BY65 106 aa10.9□□□□□ -0.66
TGFB1-202ENST00000597453 IGKV3-20P01619 116 aa10.89□□□□□ -0.67
TGFB1-202ENST00000597453 CXCL2P19875 107 aa10.89□□□□□ -0.67
TGFB1-202ENST00000597453 B2MP61769 119 aa10.89□□□□□ -0.67
TGFB1-202ENST00000597453 NUTF2P61970 127 aaKnown RBP10.89□□□□□ -0.67
TGFB1-202ENST00000597453 C10orf113Q5VZT2 155 aa10.89□□□□□ -0.67
TGFB1-202ENST00000597453 LINC00305Q7Z4B0 112 aa10.89□□□□□ -0.67
TGFB1-202ENST00000597453 OR1L4Q8NGR5 311 aa10.89□□□□□ -0.67
TGFB1-202ENST00000597453 C17orf77Q96MU5 243 aa10.89□□□□□ -0.67
TGFB1-202ENST00000597453 PFDN5Q99471 154 aa10.89□□□□□ -0.67
TGFB1-202ENST00000597453 ATP5SQ99766 215 aa10.89□□□□□ -0.67
TGFB1-202ENST00000597453 RSG1Q9BU20 258 aa10.89□□□□□ -0.67
TGFB1-202ENST00000597453 C1QTNF4Q9BXJ3 329 aa10.89□□□□□ -0.67
TGFB1-202ENST00000597453 SLC39A9Q9NUM3 307 aa10.89□□□□□ -0.67
TGFB1-202ENST00000597453 PXMP4Q9Y6I8 212 aa10.89□□□□□ -0.67
TGFB1-202ENST00000597453 KIAA1109Q2LD37 5005 aa10.89□□□□□ -0.67
TGFB1-202ENST00000597453 A0A087X0K7 114 aa10.88□□□□□ -0.67
TGFB1-202ENST00000597453 FXYD7P58549 80 aa10.88□□□□□ -0.67
TGFB1-202ENST00000597453 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.88□□□□□ -0.67
TGFB1-202ENST00000597453 ZNF705AQ6ZN79 300 aaPredicted RBP10.88□□□□□ -0.67
TGFB1-202ENST00000597453 LINC00052Q96N35 136 aa10.88□□□□□ -0.67
TGFB1-202ENST00000597453 WDR61Q9GZS3 305 aaKnown RBP10.88□□□□□ -0.67
TGFB1-202ENST00000597453 DNAJC4Q9NNZ3 241 aa10.88□□□□□ -0.67
TGFB1-202ENST00000597453 KCNIP2Q9NS61 270 aa10.88□□□□□ -0.67
TGFB1-202ENST00000597453 MRPS12O15235 138 aaKnown RBP10.87□□□□□ -0.67
TGFB1-202ENST00000597453 ZNF345Q14585 488 aa10.87□□□□□ -0.67
TGFB1-202ENST00000597453 TMUB2Q71RG4 321 aa10.87□□□□□ -0.67
TGFB1-202ENST00000597453 C16orf92Q96LL3 132 aa10.87□□□□□ -0.67
TGFB1-202ENST00000597453 SAV1Q9H4B6 383 aaPredicted RBP10.87□□□□□ -0.67
TGFB1-202ENST00000597453 DEFB131BA0A096LNP1 70 aa10.86□□□□□ -0.67
TGFB1-202ENST00000597453 A0A0D9SG52 128 aa10.86□□□□□ -0.67
TGFB1-202ENST00000597453 ZNF705FA8MVS1 300 aaPredicted RBP10.86□□□□□ -0.67
TGFB1-202ENST00000597453 AMBPP02760 352 aa10.86□□□□□ -0.67
TGFB1-202ENST00000597453 ZNF705DP0CH99 300 aaPredicted RBP10.86□□□□□ -0.67
TGFB1-202ENST00000597453 ZNF705BP0CI00 300 aaPredicted RBP10.86□□□□□ -0.67
TGFB1-202ENST00000597453 MORN5Q5VZ52 161 aa10.86□□□□□ -0.67
TGFB1-202ENST00000597453 FOXI2Q6ZQN5 318 aa10.86□□□□□ -0.67
TGFB1-202ENST00000597453 SLC51BQ86UW2 128 aa10.86□□□□□ -0.67
TGFB1-202ENST00000597453 BPIFA4PQ86YQ2 179 aa10.86□□□□□ -0.67
TGFB1-202ENST00000597453 CCDC28AQ8IWP9 274 aa10.86□□□□□ -0.67
TGFB1-202ENST00000597453 ZNF709Q8N972 641 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms