RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 MORN3Q6PF18 240 aaPredicted RBP14.45□□□□□ -0.1
SHKBP1-214ENST00000597396 Q6ZWC4 215 aa14.45□□□□□ -0.1
SHKBP1-214ENST00000597396 ZNF738Q8NE65 137 aa14.45□□□□□ -0.1
SHKBP1-214ENST00000597396 WWC2-AS2Q96NR7 200 aa14.45□□□□□ -0.1
SHKBP1-214ENST00000597396 HRH4Q9H3N8 390 aa14.45□□□□□ -0.1
SHKBP1-214ENST00000597396 TMEM14CQ9P0S9 112 aa14.45□□□□□ -0.1
SHKBP1-214ENST00000597396 HLA-DRB4X5D2U9 266 aa14.45□□□□□ -0.1
SHKBP1-214ENST00000597396 H3BMM0 161 aa14.44□□□□□ -0.1
SHKBP1-214ENST00000597396 SPP1P10451 314 aa14.44□□□□□ -0.1
SHKBP1-214ENST00000597396 ATP6V0CP27449 155 aa14.44□□□□□ -0.1
SHKBP1-214ENST00000597396 RHOBP62745 196 aa14.44□□□□□ -0.1
SHKBP1-214ENST00000597396 GUK1Q16774 197 aa14.44□□□□□ -0.1
SHKBP1-214ENST00000597396 GDF5OSQ5U4N7 250 aa14.44□□□□□ -0.1
SHKBP1-214ENST00000597396 RPL7L1Q6DKI1 246 aaKnown RBP14.44□□□□□ -0.1
SHKBP1-214ENST00000597396 PSMG3Q9BT73 122 aaPredicted RBP14.44□□□□□ -0.1
SHKBP1-214ENST00000597396 SLC25A2Q9BXI2 301 aa14.44□□□□□ -0.1
SHKBP1-214ENST00000597396 HUWE1Q7Z6Z7 4374 aaKnown RBP14.43□□□□□ -0.1
SHKBP1-214ENST00000597396 TENM3Q9P273 2699 aa14.43□□□□□ -0.1
SHKBP1-214ENST00000597396 HMSDA8MTL9 139 aa14.43□□□□□ -0.1
SHKBP1-214ENST00000597396 F6UB75 175 aa14.43□□□□□ -0.1
SHKBP1-214ENST00000597396 H3BQ15 152 aa14.43□□□□□ -0.1
SHKBP1-214ENST00000597396 TAAR5O14804 337 aa14.43□□□□□ -0.1
SHKBP1-214ENST00000597396 SPRY2O43597 315 aa14.43□□□□□ -0.1
SHKBP1-214ENST00000597396 PYYP10082 97 aa14.43□□□□□ -0.1
SHKBP1-214ENST00000597396 HIST1H1EP10412 219 aaKnown RBP14.43□□□□□ -0.1
SHKBP1-214ENST00000597396 M6PRP20645 277 aa14.43□□□□□ -0.1
SHKBP1-214ENST00000597396 HLA-DMBP28068 263 aa14.43□□□□□ -0.1
SHKBP1-214ENST00000597396 PSG3Q16557 428 aa14.43□□□□□ -0.1
SHKBP1-214ENST00000597396 OR4B1Q8NGF8 309 aa14.43□□□□□ -0.1
SHKBP1-214ENST00000597396 OVOL2Q9BRP0 275 aa14.43□□□□□ -0.1
SHKBP1-214ENST00000597396 ZNF331Q9NQX6 463 aaPredicted RBP14.43□□□□□ -0.1
SHKBP1-214ENST00000597396 TP53TG1Q9Y2A0 90 aa14.43□□□□□ -0.1
SHKBP1-214ENST00000597396 SLC17A3O00476 420 aa14.42□□□□□ -0.1
SHKBP1-214ENST00000597396 OR7C2O60412 319 aa14.42□□□□□ -0.1
SHKBP1-214ENST00000597396 IGKV3-20P01619 116 aa14.42□□□□□ -0.1
SHKBP1-214ENST00000597396 RAB2AP61019 212 aa14.42□□□□□ -0.1
SHKBP1-214ENST00000597396 NUTF2P61970 127 aaKnown RBP14.42□□□□□ -0.1
SHKBP1-214ENST00000597396 OR11H4Q8NGC9 324 aa14.42□□□□□ -0.1
SHKBP1-214ENST00000597396 GNPNAT1Q96EK6 184 aaPredicted RBP14.42□□□□□ -0.1
SHKBP1-214ENST00000597396 ST6GAL2Q96JF0 529 aa14.42□□□□□ -0.1
SHKBP1-214ENST00000597396 FAM167A-AS1Q96KT0 104 aa14.42□□□□□ -0.1
SHKBP1-214ENST00000597396 OR51M1Q9H341 326 aa14.42□□□□□ -0.1
SHKBP1-214ENST00000597396 ZNF586Q9NXT0 402 aa14.42□□□□□ -0.1
SHKBP1-214ENST00000597396 A0A0J9YX75 114 aa14.41□□□□□ -0.1
SHKBP1-214ENST00000597396 A0A1W2PPV4 95 aa14.41□□□□□ -0.1
SHKBP1-214ENST00000597396 TAS2R45P59539 299 aa14.41□□□□□ -0.1
SHKBP1-214ENST00000597396 ZNF345Q14585 488 aa14.41□□□□□ -0.1
SHKBP1-214ENST00000597396 KHDC3LQ587J8 217 aa14.41□□□□□ -0.1
SHKBP1-214ENST00000597396 FAM122CQ6P4D5 195 aa14.41□□□□□ -0.1
SHKBP1-214ENST00000597396 KCNRGQ8N5I3 272 aa14.41□□□□□ -0.1
SHKBP1-214ENST00000597396 OR2G3Q8NGZ4 309 aa14.41□□□□□ -0.1
SHKBP1-214ENST00000597396 BLNKQ8WV28 456 aa14.41□□□□□ -0.1
SHKBP1-214ENST00000597396 RNF183Q96D59 192 aa14.41□□□□□ -0.1
SHKBP1-214ENST00000597396 PAXXQ9BUH6 204 aa14.41□□□□□ -0.1
SHKBP1-214ENST00000597396 CLEC5AQ9NY25 188 aa14.41□□□□□ -0.1
SHKBP1-214ENST00000597396 KMT2CQ8NEZ4 4911 aaKnown RBP14.41□□□□□ -0.1
SHKBP1-214ENST00000597396 JTBO76095 146 aa14.4□□□□□ -0.1
SHKBP1-214ENST00000597396 C4BPBP20851 252 aa14.4□□□□□ -0.1
SHKBP1-214ENST00000597396 SERF2P84101 59 aa14.4□□□□□ -0.1
SHKBP1-214ENST00000597396 TMEM41BQ5BJD5 291 aa14.4□□□□□ -0.1
SHKBP1-214ENST00000597396 OR10G4Q8NGN3 311 aa14.4□□□□□ -0.1
SHKBP1-214ENST00000597396 OR10G9Q8NGN4 311 aa14.4□□□□□ -0.1
SHKBP1-214ENST00000597396 OR10G7Q8NGN6 311 aa14.4□□□□□ -0.1
SHKBP1-214ENST00000597396 SAT2Q96F10 170 aaPredicted RBP14.4□□□□□ -0.1
SHKBP1-214ENST00000597396 ARPC5LQ9BPX5 153 aa14.4□□□□□ -0.1
SHKBP1-214ENST00000597396 SH3BGRL3Q9H299 93 aa14.4□□□□□ -0.1
SHKBP1-214ENST00000597396 TRBV19A0A075B6N1 114 aa14.39□□□□□ -0.11
SHKBP1-214ENST00000597396 A0A0D9SG52 128 aa14.39□□□□□ -0.11
SHKBP1-214ENST00000597396 ZNF253O75346 499 aa14.39□□□□□ -0.11
SHKBP1-214ENST00000597396 DUSP14O95147 198 aaKnown RBP14.39□□□□□ -0.11
SHKBP1-214ENST00000597396 MBP02144 154 aa14.39□□□□□ -0.11
SHKBP1-214ENST00000597396 OR10J4P0C629 311 aa14.39□□□□□ -0.11
SHKBP1-214ENST00000597396 PDE6HQ13956 83 aa14.39□□□□□ -0.11
SHKBP1-214ENST00000597396 TCTE3Q8IZS6 198 aa14.39□□□□□ -0.11
SHKBP1-214ENST00000597396 RPUSD4Q96CM3 377 aaKnown RBP14.39□□□□□ -0.11
SHKBP1-214ENST00000597396 NBEAP1P0C6P0 100 aa14.38□□□□□ -0.11
SHKBP1-214ENST00000597396 UBE2L3P68036 154 aaKnown RBP14.38□□□□□ -0.11
SHKBP1-214ENST00000597396 PSG9Q00887 426 aa14.38□□□□□ -0.11
SHKBP1-214ENST00000597396 AKAP14Q86UN6 197 aa14.38□□□□□ -0.11
SHKBP1-214ENST00000597396 RNF141Q8WVD5 230 aa14.38□□□□□ -0.11
SHKBP1-214ENST00000597396 CLUHP3Q96NS8 147 aa14.38□□□□□ -0.11
SHKBP1-214ENST00000597396 C1QTNF4Q9BXJ3 329 aa14.38□□□□□ -0.11
SHKBP1-214ENST00000597396 KANTRA0A1W2PQU2 76 aa14.37□□□□□ -0.11
SHKBP1-214ENST00000597396 EIF3GO75821 320 aaKnown RBP eCLIP14.37□□□□□ -0.11
SHKBP1-214ENST00000597396 ZNF705DP0CH99 300 aaPredicted RBP14.37□□□□□ -0.11
SHKBP1-214ENST00000597396 ZNF705BP0CI00 300 aaPredicted RBP14.37□□□□□ -0.11
SHKBP1-214ENST00000597396 CDC34P49427 236 aaPredicted RBP14.37□□□□□ -0.11
SHKBP1-214ENST00000597396 CNN1P51911 297 aaKnown RBP14.37□□□□□ -0.11
SHKBP1-214ENST00000597396 FXYD7P58549 80 aa14.37□□□□□ -0.11
SHKBP1-214ENST00000597396 HIST1H1AQ02539 215 aaPredicted RBP14.37□□□□□ -0.11
SHKBP1-214ENST00000597396 OR8A1Q8NGG7 326 aa14.37□□□□□ -0.11
SHKBP1-214ENST00000597396 FXYD5Q96DB9 178 aa14.37□□□□□ -0.11
SHKBP1-214ENST00000597396 AAMDCQ9H7C9 122 aa14.37□□□□□ -0.11
SHKBP1-214ENST00000597396 CYTL1Q9NRR1 136 aa14.37□□□□□ -0.11
SHKBP1-214ENST00000597396 XCL2Q9UBD3 114 aa14.37□□□□□ -0.11
SHKBP1-214ENST00000597396 STAB2Q8WWQ8 2551 aa14.37□□□□□ -0.11
SHKBP1-214ENST00000597396 ZNF705FA8MVS1 300 aaPredicted RBP14.36□□□□□ -0.11
SHKBP1-214ENST00000597396 GIG44P09565 113 aaPredicted RBP14.36□□□□□ -0.11
SHKBP1-214ENST00000597396 PRB4P10163 310 aaPredicted RBP14.36□□□□□ -0.11
SHKBP1-214ENST00000597396 BCL2L11O43521 198 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 172.5 ms