RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 Q6ZRG5 221 aa7.55□□□□□ -1.2
CCDC9-203ENST00000596938 NRARPQ7Z6K4 114 aa7.55□□□□□ -1.2
CCDC9-203ENST00000596938 C1orf158Q8N1D5 194 aa7.55□□□□□ -1.2
CCDC9-203ENST00000596938 RNF182Q8N6D2 247 aa7.55□□□□□ -1.2
CCDC9-203ENST00000596938 TMEM252Q8N6L7 170 aa7.55□□□□□ -1.2
CCDC9-203ENST00000596938 IGF2BP2-AS1Q96M15 143 aa7.55□□□□□ -1.2
CCDC9-203ENST00000596938 DNAJC4Q9NNZ3 241 aa7.55□□□□□ -1.2
CCDC9-203ENST00000596938 APLNQ9ULZ1 77 aa7.55□□□□□ -1.2
CCDC9-203ENST00000596938 CELA1Q9UNI1 258 aa7.55□□□□□ -1.2
CCDC9-203ENST00000596938 GOLT1BQ9Y3E0 138 aa7.55□□□□□ -1.2
CCDC9-203ENST00000596938 IGHV3OR16-12A0A075B7B8 117 aa7.54□□□□□ -1.2
CCDC9-203ENST00000596938 COX7A2P2O60397 106 aa7.54□□□□□ -1.2
CCDC9-203ENST00000596938 PRAF2O60831 178 aa7.54□□□□□ -1.2
CCDC9-203ENST00000596938 RPL29P47914 159 aaKnown RBP7.54□□□□□ -1.2
CCDC9-203ENST00000596938 S100A10P60903 97 aa7.54□□□□□ -1.2
CCDC9-203ENST00000596938 HBG1P69891 147 aa7.54□□□□□ -1.2
CCDC9-203ENST00000596938 HBG2P69892 147 aa7.54□□□□□ -1.2
CCDC9-203ENST00000596938 PSG3Q16557 428 aa7.54□□□□□ -1.2
CCDC9-203ENST00000596938 C10orf113Q5VZT2 155 aa7.54□□□□□ -1.2
CCDC9-203ENST00000596938 STX12Q86Y82 276 aa7.54□□□□□ -1.2
CCDC9-203ENST00000596938 BPIFA4PQ86YQ2 179 aa7.54□□□□□ -1.2
CCDC9-203ENST00000596938 OR11H7Q8NGC8 314 aa7.54□□□□□ -1.2
CCDC9-203ENST00000596938 LRRC20Q8TCA0 184 aa7.54□□□□□ -1.2
CCDC9-203ENST00000596938 RNF126Q9BV68 326 aa7.54□□□□□ -1.2
CCDC9-203ENST00000596938 BATF3Q9NR55 127 aa7.54□□□□□ -1.2
CCDC9-203ENST00000596938 DNAH10Q8IVF4 4471 aa7.53□□□□□ -1.2
CCDC9-203ENST00000596938 DEFB131BA0A096LNP1 70 aa7.53□□□□□ -1.2
CCDC9-203ENST00000596938 TEX48A0A1B0GUV7 120 aa7.53□□□□□ -1.2
CCDC9-203ENST00000596938 IGSF23A1L1A6 192 aa7.53□□□□□ -1.2
CCDC9-203ENST00000596938 INMT-MINDY4F8WBC2 141 aa7.53□□□□□ -1.2
CCDC9-203ENST00000596938 HBE1P02100 147 aa7.53□□□□□ -1.2
CCDC9-203ENST00000596938 RLN2P04090 185 aa7.53□□□□□ -1.2
CCDC9-203ENST00000596938 B2MP61769 119 aa7.53□□□□□ -1.2
CCDC9-203ENST00000596938 CYCSP99999 105 aaKnown RBP7.53□□□□□ -1.2
CCDC9-203ENST00000596938 LCN15Q6UWW0 184 aa7.53□□□□□ -1.2
CCDC9-203ENST00000596938 ZNF738Q8NE65 137 aa7.53□□□□□ -1.2
CCDC9-203ENST00000596938 OR8A1Q8NGG7 326 aa7.53□□□□□ -1.2
CCDC9-203ENST00000596938 OR1L4Q8NGR5 311 aa7.53□□□□□ -1.2
CCDC9-203ENST00000596938 SLC50A1Q9BRV3 221 aa7.53□□□□□ -1.2
CCDC9-203ENST00000596938 MARVELD1Q9BSK0 173 aa7.53□□□□□ -1.2
CCDC9-203ENST00000596938 NMES1Q9C002 83 aa7.53□□□□□ -1.2
CCDC9-203ENST00000596938 ZNF331Q9NQX6 463 aaPredicted RBP7.53□□□□□ -1.2
CCDC9-203ENST00000596938 DKK2Q9UBU2 259 aa7.53□□□□□ -1.2
CCDC9-203ENST00000596938 IGHV4-4A0A075B6R2 117 aa7.52□□□□□ -1.21
CCDC9-203ENST00000596938 CRXO43186 299 aaPredicted RBP7.52□□□□□ -1.21
CCDC9-203ENST00000596938 MPDU1O75352 247 aa7.52□□□□□ -1.21
CCDC9-203ENST00000596938 IGLC2P0DOY2 106 aa7.52□□□□□ -1.21
CCDC9-203ENST00000596938 EMP1P54849 157 aa7.52□□□□□ -1.21
CCDC9-203ENST00000596938 OPCMLQ14982 345 aa7.52□□□□□ -1.21
CCDC9-203ENST00000596938 OXA1LQ15070 435 aa7.52□□□□□ -1.21
CCDC9-203ENST00000596938 GUK1Q16774 197 aa7.52□□□□□ -1.21
CCDC9-203ENST00000596938 RRN3P1Q2M238 152 aa7.52□□□□□ -1.21
CCDC9-203ENST00000596938 MORN5Q5VZ52 161 aa7.52□□□□□ -1.21
CCDC9-203ENST00000596938 MIC13Q5XKP0 118 aa7.52□□□□□ -1.21
CCDC9-203ENST00000596938 RPUSD4Q96CM3 377 aaKnown RBP7.52□□□□□ -1.21
CCDC9-203ENST00000596938 SAT2Q96F10 170 aaPredicted RBP7.52□□□□□ -1.21
CCDC9-203ENST00000596938 PFDN5Q99471 154 aa7.52□□□□□ -1.21
CCDC9-203ENST00000596938 SLC39A9Q9NUM3 307 aa7.52□□□□□ -1.21
CCDC9-203ENST00000596938 LOC102723971A0A1B0GUV8 181 aa7.51□□□□□ -1.21
CCDC9-203ENST00000596938 E5RGE8 158 aa7.51□□□□□ -1.21
CCDC9-203ENST00000596938 H3BQ15 152 aa7.51□□□□□ -1.21
CCDC9-203ENST00000596938 M0R2Z0 102 aa7.51□□□□□ -1.21
CCDC9-203ENST00000596938 SIX6O95475 246 aa7.51□□□□□ -1.21
CCDC9-203ENST00000596938 INSP01308 110 aa7.51□□□□□ -1.21
CCDC9-203ENST00000596938 TSPOP30536 169 aa7.51□□□□□ -1.21
CCDC9-203ENST00000596938 DEFA1P59665 94 aa7.51□□□□□ -1.21
CCDC9-203ENST00000596938 DEFA3P59666 94 aa7.51□□□□□ -1.21
CCDC9-203ENST00000596938 NHLH2Q02577 135 aa7.51□□□□□ -1.21
CCDC9-203ENST00000596938 BAXQ07812 192 aa7.51□□□□□ -1.21
CCDC9-203ENST00000596938 SPINK13Q1W4C9 94 aa7.51□□□□□ -1.21
CCDC9-203ENST00000596938 FAM222AQ5U5X8 452 aa7.51□□□□□ -1.21
CCDC9-203ENST00000596938 ZNF767PQ75MW2 155 aa7.51□□□□□ -1.21
CCDC9-203ENST00000596938 RPP25LQ8N5L8 163 aaKnown RBP7.51□□□□□ -1.21
CCDC9-203ENST00000596938 NIPSNAP3BQ9BS92 247 aa7.51□□□□□ -1.21
CCDC9-203ENST00000596938 TMEM208Q9BTX3 173 aa7.51□□□□□ -1.21
CCDC9-203ENST00000596938 SLC25A31Q9H0C2 315 aa7.51□□□□□ -1.21
CCDC9-203ENST00000596938 PXMP4Q9Y6I8 212 aa7.51□□□□□ -1.21
CCDC9-203ENST00000596938 DNAH6Q9C0G6 4158 aa7.51□□□□□ -1.21
CCDC9-203ENST00000596938 TRAV5A0A0B4J249 113 aa7.5□□□□□ -1.21
CCDC9-203ENST00000596938 UBE2L5PA0A1B0GUS4 154 aa7.5□□□□□ -1.21
CCDC9-203ENST00000596938 H0YIZ8 118 aa7.5□□□□□ -1.21
CCDC9-203ENST00000596938 BOLA2-SMG1P6H3BVE0 249 aa7.5□□□□□ -1.21
CCDC9-203ENST00000596938 ZNF253O75346 499 aa7.5□□□□□ -1.21
CCDC9-203ENST00000596938 FGF7P21781 194 aa7.5□□□□□ -1.21
CCDC9-203ENST00000596938 H2BFSP57053 126 aa7.5□□□□□ -1.21
CCDC9-203ENST00000596938 RHOBP62745 196 aa7.5□□□□□ -1.21
CCDC9-203ENST00000596938 HIST1H1AQ02539 215 aaPredicted RBP7.5□□□□□ -1.21
CCDC9-203ENST00000596938 TMEM256Q8N2U0 113 aa7.5□□□□□ -1.21
CCDC9-203ENST00000596938 FAM210BQ96KR6 192 aa7.5□□□□□ -1.21
CCDC9-203ENST00000596938 PPP1R14DQ9NXH3 145 aa7.5□□□□□ -1.21
CCDC9-203ENST00000596938 OR5AC2Q9NZP5 309 aa7.5□□□□□ -1.21
CCDC9-203ENST00000596938 YTHDF2Q9Y5A9 579 aaKnown RBP7.5□□□□□ -1.21
CCDC9-203ENST00000596938 FRAS1Q86XX4 4008 aa7.49□□□□□ -1.21
CCDC9-203ENST00000596938 SNRPCP09234 159 aaKnown RBP7.49□□□□□ -1.21
CCDC9-203ENST00000596938 BAP18Q8IXM2 172 aa7.49□□□□□ -1.21
CCDC9-203ENST00000596938 OR5C1Q8NGR4 320 aa7.49□□□□□ -1.21
CCDC9-203ENST00000596938 NDUFAF3Q9BU61 184 aa7.49□□□□□ -1.21
CCDC9-203ENST00000596938 NPCDR1Q9BY65 106 aa7.49□□□□□ -1.21
CCDC9-203ENST00000596938 PLA2G2EQ9NZK7 142 aa7.49□□□□□ -1.21
CCDC9-203ENST00000596938 TMEM14CQ9P0S9 112 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms