RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 DEFB1P60022 68 aa13.32□□□□□ -0.28
ZNF558-204ENST00000596172 GCSAMLQ5JQS6 135 aa13.32□□□□□ -0.28
ZNF558-204ENST00000596172 C1QTNF4Q9BXJ3 329 aa13.32□□□□□ -0.28
ZNF558-204ENST00000596172 ZNF331Q9NQX6 463 aaPredicted RBP13.32□□□□□ -0.28
ZNF558-204ENST00000596172 CLEC5AQ9NY25 188 aa13.32□□□□□ -0.28
ZNF558-204ENST00000596172 H3BQ15 152 aa13.31□□□□□ -0.28
ZNF558-204ENST00000596172 ZNF253O75346 499 aa13.31□□□□□ -0.28
ZNF558-204ENST00000596172 ZNF266Q14584 549 aa13.31□□□□□ -0.28
ZNF558-204ENST00000596172 PSG3Q16557 428 aa13.31□□□□□ -0.28
ZNF558-204ENST00000596172 FAM78BQ5VT40 261 aa13.31□□□□□ -0.28
ZNF558-204ENST00000596172 IGFL4Q6B9Z1 124 aa13.31□□□□□ -0.28
ZNF558-204ENST00000596172 RNF182Q8N6D2 247 aa13.31□□□□□ -0.28
ZNF558-204ENST00000596172 INO80EQ8NBZ0 244 aaPredicted RBP13.31□□□□□ -0.28
ZNF558-204ENST00000596172 CSNK1G2-AS1Q8NCQ2 148 aa13.31□□□□□ -0.28
ZNF558-204ENST00000596172 SAT2Q96F10 170 aaPredicted RBP13.31□□□□□ -0.28
ZNF558-204ENST00000596172 RARRES2Q99969 163 aa13.31□□□□□ -0.28
ZNF558-204ENST00000596172 MRPL32Q9BYC8 188 aaKnown RBP13.31□□□□□ -0.28
ZNF558-204ENST00000596172 AGRNO00468 2067 aa13.31□□□□□ -0.28
ZNF558-204ENST00000596172 F6UB75 175 aa13.3□□□□□ -0.28
ZNF558-204ENST00000596172 G3V3Q6 166 aa13.3□□□□□ -0.28
ZNF558-204ENST00000596172 DUSP14O95147 198 aaKnown RBP13.3□□□□□ -0.28
ZNF558-204ENST00000596172 OR11H2Q8NH07 326 aa13.3□□□□□ -0.28
ZNF558-204ENST00000596172 IL17DQ8TAD2 202 aa13.3□□□□□ -0.28
ZNF558-204ENST00000596172 TNFSF18Q9UNG2 199 aa13.3□□□□□ -0.28
ZNF558-204ENST00000596172 TIMM9Q9Y5J7 89 aa13.3□□□□□ -0.28
ZNF558-204ENST00000596172 HIST1H1EP10412 219 aaKnown RBP13.29□□□□□ -0.28
ZNF558-204ENST00000596172 PSG9Q00887 426 aa13.29□□□□□ -0.28
ZNF558-204ENST00000596172 FFAR4Q5NUL3 377 aa13.29□□□□□ -0.28
ZNF558-204ENST00000596172 ZNF738Q8NE65 137 aa13.29□□□□□ -0.28
ZNF558-204ENST00000596172 OR4B1Q8NGF8 309 aa13.29□□□□□ -0.28
ZNF558-204ENST00000596172 FAM167A-AS1Q96KT0 104 aa13.29□□□□□ -0.28
ZNF558-204ENST00000596172 ZNF586Q9NXT0 402 aa13.29□□□□□ -0.28
ZNF558-204ENST00000596172 FUT9Q9Y231 359 aa13.29□□□□□ -0.28
ZNF558-204ENST00000596172 FXYD6-FXYD2A0A087WZ82 144 aa13.28□□□□□ -0.28
ZNF558-204ENST00000596172 RNF222A6NCQ9 220 aa13.28□□□□□ -0.28
ZNF558-204ENST00000596172 ZNF705EA8MWA4 302 aaPredicted RBP13.28□□□□□ -0.28
ZNF558-204ENST00000596172 PDE6HQ13956 83 aa13.28□□□□□ -0.28
ZNF558-204ENST00000596172 MIR17HGQ75NE6 70 aa13.28□□□□□ -0.28
ZNF558-204ENST00000596172 SLC25A2Q9BXI2 301 aa13.28□□□□□ -0.28
ZNF558-204ENST00000596172 TRBV19A0A075B6N1 114 aa13.27□□□□□ -0.29
ZNF558-204ENST00000596172 A0A0J9YWU9 116 aa13.27□□□□□ -0.29
ZNF558-204ENST00000596172 SLC17A3O00476 420 aa13.27□□□□□ -0.29
ZNF558-204ENST00000596172 IGKV3-20P01619 116 aa13.27□□□□□ -0.29
ZNF558-204ENST00000596172 HLA-DMBP28068 263 aa13.27□□□□□ -0.29
ZNF558-204ENST00000596172 AMTNQ6UX39 209 aa13.27□□□□□ -0.29
ZNF558-204ENST00000596172 OR8A1Q8NGG7 326 aa13.27□□□□□ -0.29
ZNF558-204ENST00000596172 XCL2Q9UBD3 114 aa13.27□□□□□ -0.29
ZNF558-204ENST00000596172 SNRPCP09234 159 aaKnown RBP13.26□□□□□ -0.29
ZNF558-204ENST00000596172 CNN1P51911 297 aaKnown RBP13.26□□□□□ -0.29
ZNF558-204ENST00000596172 RHOBP62745 196 aa13.26□□□□□ -0.29
ZNF558-204ENST00000596172 OR2G3Q8NGZ4 309 aa13.26□□□□□ -0.29
ZNF558-204ENST00000596172 RPUSD4Q96CM3 377 aaKnown RBP13.26□□□□□ -0.29
ZNF558-204ENST00000596172 OR51M1Q9H341 326 aa13.26□□□□□ -0.29
ZNF558-204ENST00000596172 C11orf68Q9H3H3 251 aaKnown RBP13.26□□□□□ -0.29
ZNF558-204ENST00000596172 H3BTX0 84 aa13.25□□□□□ -0.29
ZNF558-204ENST00000596172 PYYP10082 97 aa13.25□□□□□ -0.29
ZNF558-204ENST00000596172 M6PRP20645 277 aa13.25□□□□□ -0.29
ZNF558-204ENST00000596172 ACOT6Q3I5F7 207 aaPredicted RBP13.25□□□□□ -0.29
ZNF558-204ENST00000596172 CASC10Q5T4H9 136 aa13.25□□□□□ -0.29
ZNF558-204ENST00000596172 PSMG3Q9BT73 122 aaPredicted RBP13.25□□□□□ -0.29
ZNF558-204ENST00000596172 SLC35B3Q9H1N7 401 aa13.25□□□□□ -0.29
ZNF558-204ENST00000596172 NDUFB4O95168 129 aa13.24□□□□□ -0.29
ZNF558-204ENST00000596172 AMBPP02760 352 aa13.24□□□□□ -0.29
ZNF558-204ENST00000596172 MIFP14174 115 aa13.24□□□□□ -0.29
ZNF558-204ENST00000596172 SERF2P84101 59 aa13.24□□□□□ -0.29
ZNF558-204ENST00000596172 ZNF705AQ6ZN79 300 aaPredicted RBP13.24□□□□□ -0.29
ZNF558-204ENST00000596172 MRPL53Q96EL3 112 aaKnown RBP13.24□□□□□ -0.29
ZNF558-204ENST00000596172 PAXXQ9BUH6 204 aa13.24□□□□□ -0.29
ZNF558-204ENST00000596172 MFFQ9GZY8 342 aa13.24□□□□□ -0.29
ZNF558-204ENST00000596172 RFNGQ9Y644 331 aa13.24□□□□□ -0.29
ZNF558-204ENST00000596172 X6R8D5 127 aa13.24□□□□□ -0.29
ZNF558-204ENST00000596172 BORCS7-ASMTA0A0B4J1R7 106 aa13.23□□□□□ -0.29
ZNF558-204ENST00000596172 TAAR5O14804 337 aa13.23□□□□□ -0.29
ZNF558-204ENST00000596172 NBEAP1P0C6P0 100 aa13.23□□□□□ -0.29
ZNF558-204ENST00000596172 ZNF705DP0CH99 300 aaPredicted RBP13.23□□□□□ -0.29
ZNF558-204ENST00000596172 ZNF705BP0CI00 300 aaPredicted RBP13.23□□□□□ -0.29
ZNF558-204ENST00000596172 ATP6V0CP27449 155 aa13.23□□□□□ -0.29
ZNF558-204ENST00000596172 TAS2R45P59539 299 aa13.23□□□□□ -0.29
ZNF558-204ENST00000596172 Q8NAQ8 132 aa13.23□□□□□ -0.29
ZNF558-204ENST00000596172 HSD17B11Q8NBQ5 300 aa13.23□□□□□ -0.29
ZNF558-204ENST00000596172 RNF141Q8WVD5 230 aa13.23□□□□□ -0.29
ZNF558-204ENST00000596172 FXYD5Q96DB9 178 aa13.23□□□□□ -0.29
ZNF558-204ENST00000596172 NEU1Q99519 415 aa13.23□□□□□ -0.29
ZNF558-204ENST00000596172 PRELID1Q9Y255 219 aa13.23□□□□□ -0.29
ZNF558-204ENST00000596172 ZNF705FA8MVS1 300 aaPredicted RBP13.22□□□□□ -0.29
ZNF558-204ENST00000596172 FXYD7P58549 80 aa13.22□□□□□ -0.29
ZNF558-204ENST00000596172 HIST1H1AQ02539 215 aaPredicted RBP13.22□□□□□ -0.29
ZNF558-204ENST00000596172 KHDC3LQ587J8 217 aa13.22□□□□□ -0.29
ZNF558-204ENST00000596172 Q6ZNX1 250 aa13.22□□□□□ -0.29
ZNF558-204ENST00000596172 GNPNAT1Q96EK6 184 aaPredicted RBP13.22□□□□□ -0.29
ZNF558-204ENST00000596172 ZNF503Q96F45 646 aa13.22□□□□□ -0.29
ZNF558-204ENST00000596172 SMIM9A6NGZ8 99 aa13.21□□□□□ -0.29
ZNF558-204ENST00000596172 HMSDA8MTL9 139 aa13.21□□□□□ -0.29
ZNF558-204ENST00000596172 ARPC5O15511 151 aa13.21□□□□□ -0.29
ZNF558-204ENST00000596172 MBP02144 154 aa13.21□□□□□ -0.29
ZNF558-204ENST00000596172 RPL7L1Q6DKI1 246 aaKnown RBP13.21□□□□□ -0.29
ZNF558-204ENST00000596172 OR10G4Q8NGN3 311 aa13.21□□□□□ -0.29
ZNF558-204ENST00000596172 OR10G9Q8NGN4 311 aa13.21□□□□□ -0.29
ZNF558-204ENST00000596172 OR10G7Q8NGN6 311 aa13.21□□□□□ -0.29
ZNF558-204ENST00000596172 OR10J6PQ8NGY7 276 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms