RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 PXMP4Q9Y6I8 212 aa14.42□□□□□ -0.1
PNKP-207ENST00000596014 C17orf112F2Z3M2 114 aa14.42□□□□□ -0.1
PNKP-207ENST00000596014 DNASE2O00115 360 aaPredicted RBP14.42□□□□□ -0.1
PNKP-207ENST00000596014 STXBP6Q8NFX7 210 aa14.42□□□□□ -0.1
PNKP-207ENST00000596014 MBD3L1Q8WWY6 194 aa14.42□□□□□ -0.1
PNKP-207ENST00000596014 SHANK2-AS3Q9BTD1 123 aa14.42□□□□□ -0.1
PNKP-207ENST00000596014 SLC25A22Q9H936 323 aa14.42□□□□□ -0.1
PNKP-207ENST00000596014 C19orf73Q9NVV2 129 aa14.42□□□□□ -0.1
PNKP-207ENST00000596014 ELOA3CA0A087WX78 387 aaPredicted RBP14.41□□□□□ -0.1
PNKP-207ENST00000596014 TRAV2A0A0B4J234 112 aa14.41□□□□□ -0.1
PNKP-207ENST00000596014 RBFOX3A6NFN3 312 aa14.41□□□□□ -0.1
PNKP-207ENST00000596014 H3BRN7 92 aa14.41□□□□□ -0.1
PNKP-207ENST00000596014 COX7A2P2O60397 106 aa14.41□□□□□ -0.1
PNKP-207ENST00000596014 ZNF506Q5JVG8 444 aa14.41□□□□□ -0.1
PNKP-207ENST00000596014 LEMD1Q68G75 181 aa14.41□□□□□ -0.1
PNKP-207ENST00000596014 S100A7AQ86SG5 101 aa14.41□□□□□ -0.1
PNKP-207ENST00000596014 ZNF709Q8N972 641 aa14.41□□□□□ -0.1
PNKP-207ENST00000596014 SMDT1Q9H4I9 107 aa14.41□□□□□ -0.1
PNKP-207ENST00000596014 DNAJC4Q9NNZ3 241 aa14.41□□□□□ -0.1
PNKP-207ENST00000596014 MAP1LC3B2A6NCE7 125 aa14.4□□□□□ -0.1
PNKP-207ENST00000596014 OR11H12B2RN74 326 aa14.4□□□□□ -0.1
PNKP-207ENST00000596014 FFAR4Q5NUL3 377 aa14.4□□□□□ -0.1
PNKP-207ENST00000596014 LINC00305Q7Z4B0 112 aa14.4□□□□□ -0.1
PNKP-207ENST00000596014 MAP1LC3BQ9GZQ8 125 aa14.4□□□□□ -0.1
PNKP-207ENST00000596014 WFDC10AQ9H1F0 79 aa14.4□□□□□ -0.1
PNKP-207ENST00000596014 LOC102723971A0A1B0GUV8 181 aa14.39□□□□□ -0.11
PNKP-207ENST00000596014 FAM74A7A6NL05 159 aa14.39□□□□□ -0.11
PNKP-207ENST00000596014 MBP02144 154 aa14.39□□□□□ -0.11
PNKP-207ENST00000596014 IGHV4-30-4P0DP06 118 aa14.39□□□□□ -0.11
PNKP-207ENST00000596014 HAGHQ16775 308 aa14.39□□□□□ -0.11
PNKP-207ENST00000596014 ODF3L2Q3SX64 289 aa14.39□□□□□ -0.11
PNKP-207ENST00000596014 FAM74A3Q4VXF1 159 aa14.39□□□□□ -0.11
PNKP-207ENST00000596014 C10orf113Q5VZT2 155 aa14.39□□□□□ -0.11
PNKP-207ENST00000596014 LCN15Q6UWW0 184 aa14.39□□□□□ -0.11
PNKP-207ENST00000596014 DEFB125Q8N687 156 aa14.39□□□□□ -0.11
PNKP-207ENST00000596014 OR1L4Q8NGR5 311 aa14.39□□□□□ -0.11
PNKP-207ENST00000596014 DCANP1Q8TF63 244 aa14.39□□□□□ -0.11
PNKP-207ENST00000596014 K7EQG2 157 aa14.39□□□□□ -0.11
PNKP-207ENST00000596014 ICAM4Q14773 271 aa14.39□□□□□ -0.11
PNKP-207ENST00000596014 PFDN5Q99471 154 aa14.39□□□□□ -0.11
PNKP-207ENST00000596014 RARRES2Q99969 163 aa14.39□□□□□ -0.11
PNKP-207ENST00000596014 SLC35B3Q9H1N7 401 aa14.39□□□□□ -0.11
PNKP-207ENST00000596014 NRN1Q9NPD7 142 aa14.39□□□□□ -0.11
PNKP-207ENST00000596014 KCNIP2Q9NS61 270 aa14.39□□□□□ -0.11
PNKP-207ENST00000596014 CTXND1A0A1B0GTU2 59 aa14.38□□□□□ -0.11
PNKP-207ENST00000596014 FGF8P55075 233 aaPredicted RBP14.38□□□□□ -0.11
PNKP-207ENST00000596014 FAM24BQ8N5W8 94 aa14.38□□□□□ -0.11
PNKP-207ENST00000596014 GPR82Q96P67 336 aa14.38□□□□□ -0.11
PNKP-207ENST00000596014 FAM110AQ9BQ89 295 aa14.38□□□□□ -0.11
PNKP-207ENST00000596014 A8MZ25 164 aa14.37□□□□□ -0.11
PNKP-207ENST00000596014 GALR1P47211 349 aa14.37□□□□□ -0.11
PNKP-207ENST00000596014 CMC4P56277 68 aaPredicted RBP14.37□□□□□ -0.11
PNKP-207ENST00000596014 CLRN3Q8NCR9 226 aa14.37□□□□□ -0.11
PNKP-207ENST00000596014 GATAD1Q8WUU5 269 aa14.37□□□□□ -0.11
PNKP-207ENST00000596014 RNF24Q9Y225 148 aa14.37□□□□□ -0.11
PNKP-207ENST00000596014 TGP01266 2768 aa14.37□□□□□ -0.11
PNKP-207ENST00000596014 DNAH9Q9NYC9 4486 aa14.37□□□□□ -0.11
PNKP-207ENST00000596014 SRP19P09132 144 aaKnown RBP14.36□□□□□ -0.11
PNKP-207ENST00000596014 BCL2P10415 239 aa14.36□□□□□ -0.11
PNKP-207ENST00000596014 ACOT6Q3I5F7 207 aaPredicted RBP14.36□□□□□ -0.11
PNKP-207ENST00000596014 GCSAMLQ5JQS6 135 aa14.36□□□□□ -0.11
PNKP-207ENST00000596014 MORN5Q5VZ52 161 aa14.36□□□□□ -0.11
PNKP-207ENST00000596014 FAM122CQ6P4D5 195 aa14.36□□□□□ -0.11
PNKP-207ENST00000596014 RPP25LQ8N5L8 163 aaKnown RBP14.36□□□□□ -0.11
PNKP-207ENST00000596014 OR10G4Q8NGN3 311 aa14.36□□□□□ -0.11
PNKP-207ENST00000596014 OR10G9Q8NGN4 311 aa14.36□□□□□ -0.11
PNKP-207ENST00000596014 OR10G7Q8NGN6 311 aa14.36□□□□□ -0.11
PNKP-207ENST00000596014 TUBA4BQ9H853 241 aa14.36□□□□□ -0.11
PNKP-207ENST00000596014 MAP6D1Q9H9H5 199 aa14.36□□□□□ -0.11
PNKP-207ENST00000596014 GNG13Q9P2W3 67 aa14.36□□□□□ -0.11
PNKP-207ENST00000596014 IFNA1P01562 189 aa14.36□□□□□ -0.11
PNKP-207ENST00000596014 FRMD6-AS1P0C7T7 363 aa14.36□□□□□ -0.11
PNKP-207ENST00000596014 RPL7P18124 248 aaKnown RBP14.36□□□□□ -0.11
PNKP-207ENST00000596014 KHDC3LQ587J8 217 aa14.36□□□□□ -0.11
PNKP-207ENST00000596014 RXFP4Q8TDU9 374 aa14.36□□□□□ -0.11
PNKP-207ENST00000596014 ACTR3CQ9C0K3 210 aaPredicted RBP14.36□□□□□ -0.11
PNKP-207ENST00000596014 C17orf77Q96MU5 243 aa14.35□□□□□ -0.11
PNKP-207ENST00000596014 SRD5A3Q9H8P0 318 aa14.35□□□□□ -0.11
PNKP-207ENST00000596014 ZNF688P0C7X2 276 aa14.34□□□□□ -0.11
PNKP-207ENST00000596014 APRG1Q8IVJ8 170 aa14.34□□□□□ -0.11
PNKP-207ENST00000596014 TRAV5A0A0B4J249 113 aa14.33□□□□□ -0.11
PNKP-207ENST00000596014 MRPS12O15235 138 aaKnown RBP14.33□□□□□ -0.11
PNKP-207ENST00000596014 CDC34P49427 236 aaPredicted RBP14.33□□□□□ -0.11
PNKP-207ENST00000596014 DEFB131AP59861 70 aa14.33□□□□□ -0.11
PNKP-207ENST00000596014 FAM78BQ5VT40 261 aa14.33□□□□□ -0.11
PNKP-207ENST00000596014 CBLN2Q8IUK8 224 aa14.33□□□□□ -0.11
PNKP-207ENST00000596014 B9D2Q9BPU9 175 aa14.33□□□□□ -0.11
PNKP-207ENST00000596014 SEPSECSQ9HD40 501 aaKnown RBP14.33□□□□□ -0.11
PNKP-207ENST00000596014 SOCS3O14543 225 aa14.33□□□□□ -0.12
PNKP-207ENST00000596014 EIF3GO75821 320 aaKnown RBP eCLIP14.33□□□□□ -0.12
PNKP-207ENST00000596014 ZNF124Q15973 351 aa14.33□□□□□ -0.12
PNKP-207ENST00000596014 SOHLH1Q5JUK2 328 aa14.33□□□□□ -0.12
PNKP-207ENST00000596014 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.33□□□□□ -0.12
PNKP-207ENST00000596014 COL7A1Q02388 2944 aa14.32□□□□□ -0.12
PNKP-207ENST00000596014 RBMY1BA6NDE4 496 aaKnown RBP14.32□□□□□ -0.12
PNKP-207ENST00000596014 RBMY1EA6NEQ0 496 aaKnown RBP14.32□□□□□ -0.12
PNKP-207ENST00000596014 RBMY1DP0C7P1 496 aaKnown RBP14.32□□□□□ -0.12
PNKP-207ENST00000596014 ATF4P18848 351 aaPredicted RBP14.32□□□□□ -0.12
PNKP-207ENST00000596014 MEOX2P50222 304 aa14.32□□□□□ -0.12
PNKP-207ENST00000596014 SNRPD3P62318 126 aaKnown RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 398.2 ms