RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 CHEK1O14757 476 aa9.94□□□□□ -0.82
SHKBP1-209ENST00000595803 CD5P06127 495 aa9.94□□□□□ -0.82
SHKBP1-209ENST00000595803 GP9P14770 177 aa9.94□□□□□ -0.82
SHKBP1-209ENST00000595803 SRSF3P84103 164 aaKnown RBP9.94□□□□□ -0.82
SHKBP1-209ENST00000595803 ICAM4Q14773 271 aa9.94□□□□□ -0.82
SHKBP1-209ENST00000595803 DLX4Q92988 240 aaPredicted RBP9.94□□□□□ -0.82
SHKBP1-209ENST00000595803 TXNDC17Q9BRA2 123 aa9.94□□□□□ -0.82
SHKBP1-209ENST00000595803 ELOVL1Q9BW60 279 aa9.94□□□□□ -0.82
SHKBP1-209ENST00000595803 ZNF586Q9NXT0 402 aa9.94□□□□□ -0.82
SHKBP1-209ENST00000595803 A0A1W2PRE2 83 aa9.93□□□□□ -0.82
SHKBP1-209ENST00000595803 FAM74A7A6NL05 159 aa9.93□□□□□ -0.82
SHKBP1-209ENST00000595803 C11orf94C9JXX5 98 aa9.93□□□□□ -0.82
SHKBP1-209ENST00000595803 H3BQ15 152 aa9.93□□□□□ -0.82
SHKBP1-209ENST00000595803 H3BTX0 84 aa9.93□□□□□ -0.82
SHKBP1-209ENST00000595803 MRPS12O15235 138 aaKnown RBP9.93□□□□□ -0.82
SHKBP1-209ENST00000595803 RANP62826 216 aaKnown RBP9.93□□□□□ -0.82
SHKBP1-209ENST00000595803 NKX6-2Q9C056 277 aaPredicted RBP9.93□□□□□ -0.82
SHKBP1-209ENST00000595803 SMAD5-AS1Q9Y6J3 95 aa9.93□□□□□ -0.82
SHKBP1-209ENST00000595803 ARL2-SNX15V9GYD0 113 aa9.93□□□□□ -0.82
SHKBP1-209ENST00000595803 TMEM213A2RRL7 107 aa9.92□□□□□ -0.82
SHKBP1-209ENST00000595803 PGPA6NDG6 321 aa9.92□□□□□ -0.82
SHKBP1-209ENST00000595803 HELTA6NFD8 242 aa9.92□□□□□ -0.82
SHKBP1-209ENST00000595803 C2orf70A6NJV1 201 aa9.92□□□□□ -0.82
SHKBP1-209ENST00000595803 ADARB2-AS1A8MUL3 147 aa9.92□□□□□ -0.82
SHKBP1-209ENST00000595803 A8MWP6 167 aa9.92□□□□□ -0.82
SHKBP1-209ENST00000595803 IGLC2P0DOY2 106 aa9.92□□□□□ -0.82
SHKBP1-209ENST00000595803 CBLN1P23435 193 aa9.92□□□□□ -0.82
SHKBP1-209ENST00000595803 RPL11P62913 178 aaKnown RBP9.92□□□□□ -0.82
SHKBP1-209ENST00000595803 SUMO1P63165 101 aaKnown RBP9.92□□□□□ -0.82
SHKBP1-209ENST00000595803 PSG9Q00887 426 aa9.92□□□□□ -0.82
SHKBP1-209ENST00000595803 MEF2BQ02080 365 aaPredicted RBP9.92□□□□□ -0.82
SHKBP1-209ENST00000595803 SIGLEC15Q6ZMC9 328 aa9.92□□□□□ -0.82
SHKBP1-209ENST00000595803 OR9G4Q8NGQ1 327 aa9.92□□□□□ -0.82
SHKBP1-209ENST00000595803 GLMPQ8WWB7 406 aa9.92□□□□□ -0.82
SHKBP1-209ENST00000595803 YTHDF2Q9Y5A9 579 aaKnown RBP9.92□□□□□ -0.82
SHKBP1-209ENST00000595803 TRBV19A0A075B6N1 114 aa9.91□□□□□ -0.82
SHKBP1-209ENST00000595803 F6UZH7 168 aa9.91□□□□□ -0.82
SHKBP1-209ENST00000595803 OVOL1O14753 267 aa9.91□□□□□ -0.82
SHKBP1-209ENST00000595803 SRP19P09132 144 aaKnown RBP9.91□□□□□ -0.82
SHKBP1-209ENST00000595803 FOLR2P14207 255 aa9.91□□□□□ -0.82
SHKBP1-209ENST00000595803 ATP5G3P48201 142 aa9.91□□□□□ -0.82
SHKBP1-209ENST00000595803 MEOX2P50222 304 aa9.91□□□□□ -0.82
SHKBP1-209ENST00000595803 FHL3Q13643 280 aa9.91□□□□□ -0.82
SHKBP1-209ENST00000595803 TCF24Q7RTU0 167 aa9.91□□□□□ -0.82
SHKBP1-209ENST00000595803 LYPD1Q8N2G4 141 aa9.91□□□□□ -0.82
SHKBP1-209ENST00000595803 C17orf77Q96MU5 243 aa9.91□□□□□ -0.82
SHKBP1-209ENST00000595803 SLC35B3Q9H1N7 401 aa9.91□□□□□ -0.82
SHKBP1-209ENST00000595803 A0A087X0K7 114 aa9.9□□□□□ -0.82
SHKBP1-209ENST00000595803 TMEM218A2RU14 115 aa9.9□□□□□ -0.82
SHKBP1-209ENST00000595803 C9JQL5 133 aa9.9□□□□□ -0.82
SHKBP1-209ENST00000595803 PDE6DO43924 150 aa9.9□□□□□ -0.82
SHKBP1-209ENST00000595803 NDUFS6O75380 124 aaKnown RBP9.9□□□□□ -0.82
SHKBP1-209ENST00000595803 EDN2P20800 178 aa9.9□□□□□ -0.82
SHKBP1-209ENST00000595803 CEBPGP53567 150 aa9.9□□□□□ -0.82
SHKBP1-209ENST00000595803 CD81P60033 236 aa9.9□□□□□ -0.82
SHKBP1-209ENST00000595803 CITED1Q99966 193 aa9.9□□□□□ -0.82
SHKBP1-209ENST00000595803 KRTAP17-1Q9BYP8 105 aa9.9□□□□□ -0.82
SHKBP1-209ENST00000595803 Q9H3A6 140 aa9.9□□□□□ -0.82
SHKBP1-209ENST00000595803 AAMDCQ9H7C9 122 aa9.9□□□□□ -0.82
SHKBP1-209ENST00000595803 OTORQ9NRC9 128 aa9.9□□□□□ -0.82
SHKBP1-209ENST00000595803 ZNF253O75346 499 aa9.89□□□□□ -0.83
SHKBP1-209ENST00000595803 ATP6V1G1O75348 118 aa9.89□□□□□ -0.83
SHKBP1-209ENST00000595803 NDUFB4O95168 129 aa9.89□□□□□ -0.83
SHKBP1-209ENST00000595803 PF4P02776 101 aa9.89□□□□□ -0.83
SHKBP1-209ENST00000595803 SLC25A5P05141 298 aaKnown RBP9.89□□□□□ -0.83
SHKBP1-209ENST00000595803 CSN3P07498 182 aa9.89□□□□□ -0.83
SHKBP1-209ENST00000595803 PDE6HQ13956 83 aa9.89□□□□□ -0.83
SHKBP1-209ENST00000595803 CMTM2Q8TAZ6 248 aa9.89□□□□□ -0.83
SHKBP1-209ENST00000595803 DYNLRB2Q8TF09 96 aa9.89□□□□□ -0.83
SHKBP1-209ENST00000595803 IGKV3-7A0A075B6H7 116 aa9.88□□□□□ -0.83
SHKBP1-209ENST00000595803 KRBOX1C9JBD0 128 aa9.88□□□□□ -0.83
SHKBP1-209ENST00000595803 F8W036 122 aa9.88□□□□□ -0.83
SHKBP1-209ENST00000595803 SFTA3P0C7M3 94 aa9.88□□□□□ -0.83
SHKBP1-209ENST00000595803 S100A1P23297 94 aa9.88□□□□□ -0.83
SHKBP1-209ENST00000595803 SOHLH1Q5JUK2 328 aa9.88□□□□□ -0.83
SHKBP1-209ENST00000595803 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.88□□□□□ -0.83
SHKBP1-209ENST00000595803 CCDC28AQ8IWP9 274 aa9.88□□□□□ -0.83
SHKBP1-209ENST00000595803 EXOC3-AS1Q8N2X6 119 aa9.88□□□□□ -0.83
SHKBP1-209ENST00000595803 C16orf92Q96LL3 132 aa9.88□□□□□ -0.83
SHKBP1-209ENST00000595803 SLC50A1Q9BRV3 221 aa9.88□□□□□ -0.83
SHKBP1-209ENST00000595803 SELENOKQ9Y6D0 94 aa9.88□□□□□ -0.83
SHKBP1-209ENST00000595803 GGTLC3B5MD39 225 aa9.87□□□□□ -0.83
SHKBP1-209ENST00000595803 TMEM250H0YL14 139 aa9.87□□□□□ -0.83
SHKBP1-209ENST00000595803 CSN1S1P47710 185 aa9.87□□□□□ -0.83
SHKBP1-209ENST00000595803 PAFAH1B2P68402 229 aa9.87□□□□□ -0.83
SHKBP1-209ENST00000595803 FAM90A2PQ658T7 463 aa9.87□□□□□ -0.83
SHKBP1-209ENST00000595803 WFDC3Q8IUB2 231 aa9.87□□□□□ -0.83
SHKBP1-209ENST00000595803 CYB561D1Q8N8Q1 229 aa9.87□□□□□ -0.83
SHKBP1-209ENST00000595803 TCEAL7Q9BRU2 100 aa9.87□□□□□ -0.83
SHKBP1-209ENST00000595803 NRN1Q9NPD7 142 aa9.87□□□□□ -0.83
SHKBP1-209ENST00000595803 ZNF331Q9NQX6 463 aaPredicted RBP9.87□□□□□ -0.83
SHKBP1-209ENST00000595803 CLEC5AQ9NY25 188 aa9.87□□□□□ -0.83
SHKBP1-209ENST00000595803 MLXQ9UH92 298 aa9.87□□□□□ -0.83
SHKBP1-209ENST00000595803 EPDR1Q9UM22 224 aa9.87□□□□□ -0.83
SHKBP1-209ENST00000595803 PRELID1Q9Y255 219 aa9.87□□□□□ -0.83
SHKBP1-209ENST00000595803 SCO2A0A1W2PP80 73 aa9.86□□□□□ -0.83
SHKBP1-209ENST00000595803 DNASE2O00115 360 aaPredicted RBP9.86□□□□□ -0.83
SHKBP1-209ENST00000595803 SLC17A3O00476 420 aa9.86□□□□□ -0.83
SHKBP1-209ENST00000595803 ID1P41134 155 aa9.86□□□□□ -0.83
SHKBP1-209ENST00000595803 ZNF674Q2M3X9 581 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms