RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 TRAV30A0A087WSZ9 112 aa9.74□□□□□ -0.85
SCAF1-202ENST00000595242 NCBP2LA6PVI3 153 aaKnown RBP9.74□□□□□ -0.85
SCAF1-202ENST00000595242 C9JCJ5 164 aa9.74□□□□□ -0.85
SCAF1-202ENST00000595242 OR7C2O60412 319 aa9.74□□□□□ -0.85
SCAF1-202ENST00000595242 IGHV3-48P01763 117 aa9.74□□□□□ -0.85
SCAF1-202ENST00000595242 FCGR2BP31994 310 aaPredicted RBP9.74□□□□□ -0.85
SCAF1-202ENST00000595242 CRIP2P52943 208 aaPredicted RBP9.74□□□□□ -0.85
SCAF1-202ENST00000595242 FLI1Q01543 452 aaPredicted RBP9.74□□□□□ -0.85
SCAF1-202ENST00000595242 MORN5Q5VZ52 161 aa9.74□□□□□ -0.85
SCAF1-202ENST00000595242 STXBP6Q8NFX7 210 aa9.74□□□□□ -0.85
SCAF1-202ENST00000595242 OR51G1Q8NGK1 321 aa9.74□□□□□ -0.85
SCAF1-202ENST00000595242 ISOC2Q96AB3 205 aa9.74□□□□□ -0.85
SCAF1-202ENST00000595242 RASL11BQ9BPW5 248 aa9.74□□□□□ -0.85
SCAF1-202ENST00000595242 TCEAL7Q9BRU2 100 aa9.74□□□□□ -0.85
SCAF1-202ENST00000595242 FAM103A1Q9BTL3 118 aaKnown RBP9.74□□□□□ -0.85
SCAF1-202ENST00000595242 LY96Q9Y6Y9 160 aa9.74□□□□□ -0.85
SCAF1-202ENST00000595242 SCO2A0A1W2PP80 73 aa9.73□□□□□ -0.85
SCAF1-202ENST00000595242 IGKV1-17P01599 117 aa9.73□□□□□ -0.85
SCAF1-202ENST00000595242 IGHG4P01861 327 aa9.73□□□□□ -0.85
SCAF1-202ENST00000595242 HIST1H1BP16401 226 aaKnown RBP9.73□□□□□ -0.85
SCAF1-202ENST00000595242 YPEL3P61236 119 aaPredicted RBP9.73□□□□□ -0.85
SCAF1-202ENST00000595242 ZNF674Q2M3X9 581 aa9.73□□□□□ -0.85
SCAF1-202ENST00000595242 TMEM190Q8WZ59 177 aa9.73□□□□□ -0.85
SCAF1-202ENST00000595242 ANAPC16Q96DE5 110 aa9.73□□□□□ -0.85
SCAF1-202ENST00000595242 ABCA13Q86UQ4 5058 aa9.72□□□□□ -0.85
SCAF1-202ENST00000595242 GGTLC3B5MD39 225 aa9.72□□□□□ -0.85
SCAF1-202ENST00000595242 HYPMO75409 117 aa9.72□□□□□ -0.85
SCAF1-202ENST00000595242 NDUFB4O95168 129 aa9.72□□□□□ -0.85
SCAF1-202ENST00000595242 TOMM40O96008 361 aa9.72□□□□□ -0.85
SCAF1-202ENST00000595242 RAB5AP20339 215 aa9.72□□□□□ -0.85
SCAF1-202ENST00000595242 PSMB8P28062 276 aa9.72□□□□□ -0.85
SCAF1-202ENST00000595242 UBE2L3P68036 154 aaKnown RBP9.72□□□□□ -0.85
SCAF1-202ENST00000595242 CFHR3Q02985 330 aa9.72□□□□□ -0.85
SCAF1-202ENST00000595242 ELOBQ15370 118 aa9.72□□□□□ -0.85
SCAF1-202ENST00000595242 ADIRFQ15847 76 aa9.72□□□□□ -0.85
SCAF1-202ENST00000595242 ZNF343Q6P1L6 599 aa9.72□□□□□ -0.85
SCAF1-202ENST00000595242 LINC00305Q7Z4B0 112 aa9.72□□□□□ -0.85
SCAF1-202ENST00000595242 LINC01551Q86U37 167 aa9.72□□□□□ -0.85
SCAF1-202ENST00000595242 FXYD5Q96DB9 178 aa9.72□□□□□ -0.85
SCAF1-202ENST00000595242 UBE2E2Q96LR5 201 aa9.72□□□□□ -0.85
SCAF1-202ENST00000595242 TXN2Q99757 166 aa9.72□□□□□ -0.85
SCAF1-202ENST00000595242 HSPB9Q9BQS6 159 aa9.72□□□□□ -0.85
SCAF1-202ENST00000595242 PAXXQ9BUH6 204 aa9.72□□□□□ -0.85
SCAF1-202ENST00000595242 OR51M1Q9H341 326 aa9.72□□□□□ -0.85
SCAF1-202ENST00000595242 GNB4Q9HAV0 340 aa9.72□□□□□ -0.85
SCAF1-202ENST00000595242 THYN1Q9P016 225 aa9.72□□□□□ -0.85
SCAF1-202ENST00000595242 MRPL27Q9P0M9 148 aaKnown RBP9.72□□□□□ -0.85
SCAF1-202ENST00000595242 TRBV20OR9-2A0A075B6H5 130 aa9.71□□□□□ -0.86
SCAF1-202ENST00000595242 IGHV3-21A0A0B4J1V1 117 aa9.71□□□□□ -0.86
SCAF1-202ENST00000595242 TRAV5A0A0B4J249 113 aa9.71□□□□□ -0.86
SCAF1-202ENST00000595242 F8W735 103 aaPredicted RBP9.71□□□□□ -0.86
SCAF1-202ENST00000595242 PSG1P11464 419 aa9.71□□□□□ -0.86
SCAF1-202ENST00000595242 MFAP4P55083 255 aa9.71□□□□□ -0.86
SCAF1-202ENST00000595242 KIAA0141Q14154 515 aaPredicted RBP9.71□□□□□ -0.86
SCAF1-202ENST00000595242 TIGITQ495A1 244 aa9.71□□□□□ -0.86
SCAF1-202ENST00000595242 C19orf54Q5BKX5 351 aa9.71□□□□□ -0.86
SCAF1-202ENST00000595242 FAM24BQ8N5W8 94 aa9.71□□□□□ -0.86
SCAF1-202ENST00000595242 VN1R17PQ8TDU5 208 aa9.71□□□□□ -0.86
SCAF1-202ENST00000595242 C2CD4CQ8TF44 421 aa9.71□□□□□ -0.86
SCAF1-202ENST00000595242 Q8WTZ3 238 aa9.71□□□□□ -0.86
SCAF1-202ENST00000595242 DLX4Q92988 240 aaPredicted RBP9.71□□□□□ -0.86
SCAF1-202ENST00000595242 OR5B12Q96R08 314 aa9.71□□□□□ -0.86
SCAF1-202ENST00000595242 DERL1Q9BUN8 251 aa9.71□□□□□ -0.86
SCAF1-202ENST00000595242 TMEM14CQ9P0S9 112 aa9.71□□□□□ -0.86
SCAF1-202ENST00000595242 HIGD1AQ9Y241 93 aa9.71□□□□□ -0.86
SCAF1-202ENST00000595242 TRBV24-1A0A075B6N3 115 aa9.7□□□□□ -0.86
SCAF1-202ENST00000595242 TRBV9A0A0B4J1U6 114 aa9.7□□□□□ -0.86
SCAF1-202ENST00000595242 ATP6V0E1O15342 81 aa9.7□□□□□ -0.86
SCAF1-202ENST00000595242 ZNF491Q8N8L2 437 aa9.7□□□□□ -0.86
SCAF1-202ENST00000595242 OR1B1Q8NGR6 318 aa9.7□□□□□ -0.86
SCAF1-202ENST00000595242 MYOZ3Q8TDC0 251 aa9.7□□□□□ -0.86
SCAF1-202ENST00000595242 PYGO2Q9BRQ0 406 aa9.7□□□□□ -0.86
SCAF1-202ENST00000595242 RETNQ9HD89 108 aa9.7□□□□□ -0.86
SCAF1-202ENST00000595242 MLXQ9UH92 298 aa9.7□□□□□ -0.86
SCAF1-202ENST00000595242 H3BRN7 92 aa9.69□□□□□ -0.86
SCAF1-202ENST00000595242 PPP1R2P9O14990 202 aa9.69□□□□□ -0.86
SCAF1-202ENST00000595242 TGOLN2O43493 480 aa9.69□□□□□ -0.86
SCAF1-202ENST00000595242 SCGB2A1O75556 95 aa9.69□□□□□ -0.86
SCAF1-202ENST00000595242 NDUFB8O95169 186 aa9.69□□□□□ -0.86
SCAF1-202ENST00000595242 BRI3O95415 125 aa9.69□□□□□ -0.86
SCAF1-202ENST00000595242 PFN1P07737 140 aaKnown RBP9.69□□□□□ -0.86
SCAF1-202ENST00000595242 OR10J4P0C629 311 aa9.69□□□□□ -0.86
SCAF1-202ENST00000595242 RD3LP0DJH9 198 aa9.69□□□□□ -0.86
SCAF1-202ENST00000595242 PYYP10082 97 aa9.69□□□□□ -0.86
SCAF1-202ENST00000595242 ORM2P19652 201 aa9.69□□□□□ -0.86
SCAF1-202ENST00000595242 SLURP1P55000 103 aa9.69□□□□□ -0.86
SCAF1-202ENST00000595242 ATP6V0BQ99437 205 aa9.69□□□□□ -0.86
SCAF1-202ENST00000595242 FAM110AQ9BQ89 295 aa9.69□□□□□ -0.86
SCAF1-202ENST00000595242 SHANK2-AS3Q9BTD1 123 aa9.69□□□□□ -0.86
SCAF1-202ENST00000595242 KLK15Q9H2R5 256 aa9.69□□□□□ -0.86
SCAF1-202ENST00000595242 C21orf62Q9NYP8 219 aa9.69□□□□□ -0.86
SCAF1-202ENST00000595242 C1orf196B1AJZ1 125 aa9.68□□□□□ -0.86
SCAF1-202ENST00000595242 H7BYZ3 331 aa9.68□□□□□ -0.86
SCAF1-202ENST00000595242 GNG7O60262 68 aa9.68□□□□□ -0.86
SCAF1-202ENST00000595242 CXCL1P09341 107 aa9.68□□□□□ -0.86
SCAF1-202ENST00000595242 RAB5BP61020 215 aa9.68□□□□□ -0.86
SCAF1-202ENST00000595242 LYZP61626 148 aa9.68□□□□□ -0.86
SCAF1-202ENST00000595242 UNQ5815/PRO19632Q6UWF5 114 aa9.68□□□□□ -0.86
SCAF1-202ENST00000595242 S100A7AQ86SG5 101 aa9.68□□□□□ -0.86
SCAF1-202ENST00000595242 RNF125Q96EQ8 232 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms