RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 TMEM37Q8WXS4 190 aa12.56□□□□□ -0.4
IRF3-208ENST00000594387 SLC35B3Q9H1N7 401 aa12.56□□□□□ -0.4
IRF3-208ENST00000594387 SLC39A9Q9NUM3 307 aa12.56□□□□□ -0.4
IRF3-208ENST00000594387 DNAH7Q8WXX0 4024 aa12.56□□□□□ -0.4
IRF3-208ENST00000594387 CXCL3P19876 107 aa12.55□□□□□ -0.4
IRF3-208ENST00000594387 HLA-DMBP28068 263 aa12.55□□□□□ -0.4
IRF3-208ENST00000594387 CNN1P51911 297 aaKnown RBP12.55□□□□□ -0.4
IRF3-208ENST00000594387 TCTAP57738 103 aa12.55□□□□□ -0.4
IRF3-208ENST00000594387 ZNF705AQ6ZN79 300 aaPredicted RBP12.55□□□□□ -0.4
IRF3-208ENST00000594387 ZNF709Q8N972 641 aa12.55□□□□□ -0.4
IRF3-208ENST00000594387 OR5C1Q8NGR4 320 aa12.55□□□□□ -0.4
IRF3-208ENST00000594387 RFNGQ9Y644 331 aa12.55□□□□□ -0.4
IRF3-208ENST00000594387 TRAV8-2A0A0B4J237 113 aa12.54□□□□□ -0.4
IRF3-208ENST00000594387 HBE1P02100 147 aa12.54□□□□□ -0.4
IRF3-208ENST00000594387 PRR20EP86478 221 aa12.54□□□□□ -0.4
IRF3-208ENST00000594387 PRR20CP86479 221 aa12.54□□□□□ -0.4
IRF3-208ENST00000594387 PRR20DP86480 221 aa12.54□□□□□ -0.4
IRF3-208ENST00000594387 PRR20BP86481 221 aa12.54□□□□□ -0.4
IRF3-208ENST00000594387 PRR20AP86496 221 aa12.54□□□□□ -0.4
IRF3-208ENST00000594387 HIST1H1AQ02539 215 aaPredicted RBP12.54□□□□□ -0.4
IRF3-208ENST00000594387 NHLH2Q02577 135 aa12.54□□□□□ -0.4
IRF3-208ENST00000594387 OPCMLQ14982 345 aa12.54□□□□□ -0.4
IRF3-208ENST00000594387 GUK1Q16774 197 aa12.54□□□□□ -0.4
IRF3-208ENST00000594387 CHAC2Q8WUX2 184 aa12.54□□□□□ -0.4
IRF3-208ENST00000594387 LINC00476Q8WZB0 136 aa12.54□□□□□ -0.4
IRF3-208ENST00000594387 C17orf77Q96MU5 243 aa12.54□□□□□ -0.4
IRF3-208ENST00000594387 KCNIP2Q9NS61 270 aa12.54□□□□□ -0.4
IRF3-208ENST00000594387 PXMP4Q9Y6I8 212 aa12.54□□□□□ -0.4
IRF3-208ENST00000594387 TRAV10A0A0B4J240 114 aa12.53□□□□□ -0.4
IRF3-208ENST00000594387 ZNF705FA8MVS1 300 aaPredicted RBP12.53□□□□□ -0.4
IRF3-208ENST00000594387 INSP01308 110 aa12.53□□□□□ -0.4
IRF3-208ENST00000594387 ZNF705DP0CH99 300 aaPredicted RBP12.53□□□□□ -0.4
IRF3-208ENST00000594387 ZNF705BP0CI00 300 aaPredicted RBP12.53□□□□□ -0.4
IRF3-208ENST00000594387 SPART-AS1P0CW21 52 aa12.53□□□□□ -0.4
IRF3-208ENST00000594387 EMP1P54849 157 aa12.53□□□□□ -0.4
IRF3-208ENST00000594387 OR8A1Q8NGG7 326 aa12.53□□□□□ -0.4
IRF3-208ENST00000594387 PPP1R1CQ8WVI7 109 aa12.53□□□□□ -0.4
IRF3-208ENST00000594387 IGF2BP2-AS1Q96M15 143 aa12.53□□□□□ -0.4
IRF3-208ENST00000594387 KMT2CQ8NEZ4 4911 aaKnown RBP12.53□□□□□ -0.4
IRF3-208ENST00000594387 TEX48A0A1B0GUV7 120 aa12.52□□□□□ -0.41
IRF3-208ENST00000594387 C17orf112F2Z3M2 114 aa12.52□□□□□ -0.41
IRF3-208ENST00000594387 SPINK13Q1W4C9 94 aa12.52□□□□□ -0.41
IRF3-208ENST00000594387 RRN3P1Q2M238 152 aa12.52□□□□□ -0.41
IRF3-208ENST00000594387 OR11H7Q8NGC8 314 aa12.52□□□□□ -0.41
IRF3-208ENST00000594387 RPUSD4Q96CM3 377 aaKnown RBP12.52□□□□□ -0.41
IRF3-208ENST00000594387 NPCDR1Q9BY65 106 aa12.52□□□□□ -0.41
IRF3-208ENST00000594387 ZNF331Q9NQX6 463 aaPredicted RBP12.52□□□□□ -0.41
IRF3-208ENST00000594387 OR5AC2Q9NZP5 309 aa12.52□□□□□ -0.41
IRF3-208ENST00000594387 IGLL5B9A064 214 aa12.51□□□□□ -0.41
IRF3-208ENST00000594387 SNRPCP09234 159 aaKnown RBP12.51□□□□□ -0.41
IRF3-208ENST00000594387 H2BFSP57053 126 aa12.51□□□□□ -0.41
IRF3-208ENST00000594387 CLINT1Q14677 625 aa12.51□□□□□ -0.41
IRF3-208ENST00000594387 OR10J6PQ8NGY7 276 aa12.51□□□□□ -0.41
IRF3-208ENST00000594387 A8MTW9 85 aa12.5□□□□□ -0.41
IRF3-208ENST00000594387 BOLA2-SMG1P6H3BVE0 249 aa12.5□□□□□ -0.41
IRF3-208ENST00000594387 MRPS12O15235 138 aaKnown RBP12.5□□□□□ -0.41
IRF3-208ENST00000594387 AMTNQ6UX39 209 aa12.5□□□□□ -0.41
IRF3-208ENST00000594387 THAP6Q8TBB0 222 aa12.5□□□□□ -0.41
IRF3-208ENST00000594387 SCGB1C1Q8TD33 95 aa12.5□□□□□ -0.41
IRF3-208ENST00000594387 CSMD3Q7Z407 3707 aa12.49□□□□□ -0.41
IRF3-208ENST00000594387 TRAV5A0A0B4J249 113 aa12.49□□□□□ -0.41
IRF3-208ENST00000594387 LOC102723971A0A1B0GUV8 181 aa12.49□□□□□ -0.41
IRF3-208ENST00000594387 M0R2Z0 102 aa12.49□□□□□ -0.41
IRF3-208ENST00000594387 MPC2O95563 127 aa12.49□□□□□ -0.41
IRF3-208ENST00000594387 IFNA5P01569 189 aa12.49□□□□□ -0.41
IRF3-208ENST00000594387 MORN5Q5VZ52 161 aa12.49□□□□□ -0.41
IRF3-208ENST00000594387 Q6ZTC4 211 aa12.49□□□□□ -0.41
IRF3-208ENST00000594387 TIMM9Q9Y5J7 89 aa12.49□□□□□ -0.41
IRF3-208ENST00000594387 DEFB131BA0A096LNP1 70 aa12.48□□□□□ -0.41
IRF3-208ENST00000594387 H0YIZ8 118 aa12.48□□□□□ -0.41
IRF3-208ENST00000594387 H3BTX0 84 aa12.48□□□□□ -0.41
IRF3-208ENST00000594387 PTTG1O95997 202 aa12.48□□□□□ -0.41
IRF3-208ENST00000594387 IGLC2P0DOY2 106 aa12.48□□□□□ -0.41
IRF3-208ENST00000594387 TSPOP30536 169 aa12.48□□□□□ -0.41
IRF3-208ENST00000594387 C12orf74Q32Q52 190 aa12.48□□□□□ -0.41
IRF3-208ENST00000594387 LGALS9CQ6DKI2 356 aa12.48□□□□□ -0.41
IRF3-208ENST00000594387 C1orf158Q8N1D5 194 aa12.48□□□□□ -0.41
IRF3-208ENST00000594387 TMEM256Q8N2U0 113 aa12.48□□□□□ -0.41
IRF3-208ENST00000594387 ATP5SQ99766 215 aa12.48□□□□□ -0.41
IRF3-208ENST00000594387 ZNF253O75346 499 aa12.47□□□□□ -0.41
IRF3-208ENST00000594387 RPL12P30050 165 aaKnown RBP12.47□□□□□ -0.41
IRF3-208ENST00000594387 ZNF767PQ75MW2 155 aa12.47□□□□□ -0.41
IRF3-208ENST00000594387 LINC01587Q99440 93 aa12.47□□□□□ -0.41
IRF3-208ENST00000594387 WDR61Q9GZS3 305 aaKnown RBP12.47□□□□□ -0.41
IRF3-208ENST00000594387 TMEM14CQ9P0S9 112 aa12.47□□□□□ -0.41
IRF3-208ENST00000594387 CELA1Q9UNI1 258 aa12.47□□□□□ -0.41
IRF3-208ENST00000594387 HSPB11Q9Y547 144 aa12.47□□□□□ -0.41
IRF3-208ENST00000594387 H3BQ15 152 aa12.46□□□□□ -0.41
IRF3-208ENST00000594387 HIST1H1EP10412 219 aaKnown RBP12.46□□□□□ -0.41
IRF3-208ENST00000594387 CDKN1BP46527 198 aa12.46□□□□□ -0.41
IRF3-208ENST00000594387 NIPSNAP3BQ9BS92 247 aa12.46□□□□□ -0.41
IRF3-208ENST00000594387 RNF126Q9BV68 326 aa12.46□□□□□ -0.41
IRF3-208ENST00000594387 MED28Q9H204 178 aa12.46□□□□□ -0.41
IRF3-208ENST00000594387 AAMDCQ9H7C9 122 aa12.46□□□□□ -0.41
IRF3-208ENST00000594387 PRELID1Q9Y255 219 aa12.46□□□□□ -0.41
IRF3-208ENST00000594387 ALG5Q9Y673 324 aa12.46□□□□□ -0.41
IRF3-208ENST00000594387 TRAV12-2A0A075B6T6 113 aa12.45□□□□□ -0.42
IRF3-208ENST00000594387 SLC17A3O00476 420 aa12.45□□□□□ -0.42
IRF3-208ENST00000594387 PDE6HQ13956 83 aa12.45□□□□□ -0.42
IRF3-208ENST00000594387 FAM222AQ5U5X8 452 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms